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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020723 ID=TCONS_00020723|Name=TCONS_00020723|organism=Clytia hemisphaerica|type=transcript|length=1727bp
TGTGTGCAGTGCAGTTGCAAGGGTTGCCAGGTTGCAGTGCCATCATAGTG
TCAGATTTGATTGAAGTTTCGGCCATGTTCAATATTATGCTCTCCATTAT
ATTTAATAATGTGCTTCAAGATATTTTACAGTCTAGTTGAAGTTTGAAAT
CAAATGACAATGAAGGACCACCCGCAGTATCATTCATGTGGGTCATGACT
CATGTTAAACTATTTTGGCTCCATTGATGTTCTTCTGACCAAGTTTGGGT
CTACTTTttagctctactctaccatttttgttttgatatacttttgtatt
ttaatgaccagccaggtctttcatttgagggctatgcatgttgctagcct
ccactgatgcaagttagttacccaatctcacggtacgaaagtcagaaaat
caggatagaagataggaaagtagaaattAGGGGgaaataagagaggatgc
atcctggtggatgatatcgtttgccaaccgtaAATATAGGGCTCTAGGGC
ACTATTAAGGATATCTCTATGGTTGGAGCTAGCCCTGGTATGCCAATGGT
ATAGGTCTATAAAATACACACTATAAGTTGGATTGTGAACTCGAATTTGT
GCTGTGGCTTTGTGGTCTAGTGGTACGTAGCATATGGAGCTTCTGAACTG
AAGGTACTGTTCATTCGTGTGTGGGTTCAAATCCCACCCGGAACTCAACT
TTGGCAAAGTTCAAAGTTGAACTCTAAAATTGACTACTGTAAGTCCAACT
TAGAAACTTCCTAAAGGTTCAGAAACTCCAGAAAACTCCAGATCAAAGAT
AAAAAAGTACAAGATCTACTCTCTCACCCGTACGAAGAAGCCACCACCAT
GCCGTGGGTCGGTCAGATGAACATTATTACTTGTTATACTTTGATTTTGC
ATAAGATTCCCATTCTTGCACTAAGATTCCTCTGCCACTTTTCTTTTCTA
CctgaaaaaatttcagaaagttAGGCAGTTTTGTCAGTAAACACAAGATC
TTCCATAGTACAGTACcaagaaaaaaaatcctttcAAATCTGTTCAAATC
TCACACCAGTTATCCCGGGAAAAATAGCAGATAAGGTTAGTCTTATTCTT
TGctctttccctttacaacaataatTATGATGCTGACAACATATACAGCA
Cagtgacaagtaatccctgtgagaagtttatattgaaaattgtaacaaaa
acgaaagtggtctcttctactgatttcTTTACAGCTCTCCTTCATAAACT
GTTTATGACATTTCTATCAATTAGATAACCGTATTTCAGACAGTCCGTCT
TTTTGGCACACATTGCCTTTCAGTGCCTTTCACAACAAGTGACTGTAAAA
GTGACATCCTACAAAAGgcttcttttatttgtttcaatctatGATCCTAA
GACGTAggctttttctcatcttcaattctcAATTCAATGGGAAAGTTAGA
TTTTCAACAAGCAccttaaaaaaattcttgaatagaagaataatttacaa
taaatattttcattgtgaaaatctggtgaaaaaagtgaaacatggaaaaa
tttcatttttggacctacctcagaGGTCCTTTAAATCAACCCATGTTCGT
CTGTTTGTCTGCAAGTTCATTTAgccttttctgattttttgaataGTGAT
ACAAAATGACAGTACCCAAAAAAATGACGGACcctgatttttgagaattt
tttttgggggcaaatttgggccgaaaa Run BLAST on NCBI transcript from alignment at sc0000363:285171..286897 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020723 ID=TCONS_00020723|Name=TCONS_00020723|organism=Clytia hemisphaerica|type=transcript|length=1727bp|location=Sequence derived from alignment at sc0000363:285171..286897 (Clytia hemisphaerica)
ttttcggcccaaatttgcccccaaaaaaaattctcaaaaatcaggGTCCG
TCATTTTTTTGGGTACTGTCATTTTGTATCACtattcaaaaaatcagaaa
aggcTAAATGAACTTGCAGACAAACAGACGAACATGGGTTGATTTAAAGG
ACCtctgaggtaggtccaaaaatgaaatttttccatgtttcacttttttc
accagattttcacaatgaaaatatttattgtaaattattcttctattcaa
gaatttttttaaggTGCTTGTTGAAAATCTAACTTTCCCATTGAATTgag
aattgaagatgagaaaaagccTACGTCTTAGGATCatagattgaaacaaa
taaaagaagcCTTTTGTAGGATGTCACTTTTACAGTCACTTGTTGTGAAA
GGCACTGAAAGGCAATGTGTGCCAAAAAGACGGACTGTCTGAAATACGGT
TATCTAATTGATAGAAATGTCATAAACAGTTTATGAAGGAGAGCTGTAAA
gaaatcagtagaagagaccactttcgtttttgttacaattttcaatataa
acttctcacagggattacttgtcactGTGCTGTATATGTTGTCAGCATCA
TAattattgttgtaaagggaaagagCAAAGAATAAGACTAACCTTATCTG
CTATTTTTCCCGGGATAACTGGTGTGAGATTTGAACAGATTTgaaaggat
tttttttcttgGTACTGTACTATGGAAGATCTTGTGTTTACTGACAAAAC
TGCCTaactttctgaaattttttcagGTAGAAAAGAAAAGTGGCAGAGGA
ATCTTAGTGCAAGAATGGGAATCTTATGCAAAATCAAAGTATAACAAGTA
ATAATGTTCATCTGACCGACCCACGGCATGGTGGTGGCTTCTTCGTACGG
GTGAGAGAGTAGATCTTGTACTTTTTTATCTTTGATCTGGAGTTTTCTGG
AGTTTCTGAACCTTTAGGAAGTTTCTAAGTTGGACTTACAGTAGTCAATT
TTAGAGTTCAACTTTGAACTTTGCCAAAGTTGAGTTCCGGGTGGGATTTG
AACCCACACACGAATGAACAGTACCTTCAGTTCAGAAGCTCCATATGCTA
CGTACCACTAGACCACAAAGCCACAGCACAAATTCGAGTTCACAATCCAA
CTTATAGTGTGTATTTTATAGACCTATACCATTGGCATACCAGGGCTAGC
TCCAACCATAGAGATATCCTTAATAGTGCCCTAGAGCCCTATATTtacgg
ttggcaaacgatatcatccaccaggatgcatcctctcttatttcCCCCTa
atttctactttcctatcttctatcctgattttctgactttcgtaccgtga
gattgggtaactaacttgcatcagtggaggctagcaacatgcatagccct
caaatgaaagacctggctggtcattaaaatacaaaagtatatcaaaacaa
aaatggtagagtagagctaaAAAGTAGACCCAAACTTGGTCAGAAGAACA
TCAATGGAGCCAAAATAGTTTAACATGAGTCATGACCCACATGAATGATA
CTGCGGGTGGTCCTTCATTGTCATTTGATTTCAAACTTCAACTAGACTGT
AAAATATCTTGAAGCACATTATTAAATATAATGGAGAGCATAATATTGAA
CATGGCCGAAACTTCAATCAAATCTGACACTATGATGGCACTGCAACCTG
GCAACCCTTGCAACTGCACTGCACACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020723-exon-sc0000363-1491911889:285171..286897 | TCONS_00020723-exon-sc0000363-1491911889:285171..286897 | Clytia hemisphaerica | exon |
| TCONS_00020723-exon-sc0000363-1510915933:285171..286897 | TCONS_00020723-exon-sc0000363-1510915933:285171..286897 | Clytia hemisphaerica | exon |
| TCONS_00020723-exon-sc0000363-1575043694:285171..286897 | TCONS_00020723-exon-sc0000363-1575043694:285171..286897 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000363 | supercontig | sc0000363:285171..286897 . |
Blast
The following BLAST results are available for this feature:
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