TCONS_00020707 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020707
Unique NameTCONS_00020707
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2144

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020707 ID=TCONS_00020707|Name=TCONS_00020707|organism=Clytia hemisphaerica|type=transcript|length=2144bp
TTTCtgtcttttttttcagattccATATCCTAGTAAATTCTAGTAAAAGG
AATATTATTGAATAATAaagttatatatattttacaaaataatttgCTAC
AAGAATGTATTCATGTTAAACAAGATTACAGTGTAATTGAAGCGGAATTT
CTGTCAGGTGGCAAAGTTATACTTGATCAATGGGGCATAGTCACAGCACA
TTTCATCAAACCAGCAATGAAGCTCTGAATCTAAACAGACCTATGTCAAC
AACCTCGGGAAAAAGTAAAGATTTGCCACCAAACCTGGATAGATTTAATG
ATTTGACACAACTACCTCCTGAAGTTGCTGtacaaattctttcaaatttg
aATGCCACTGATTTGTGTTTGGCTTCTTGTGTTTGGAAGGATTTGGCAGA
AAATGAATTGCTTTGGAAAAAGCTTTGCTTTTCCAAATGGGGATATACAA
GCATTTATGGCAATTTGAAGTATTCTCATATTTCAATCAAGCTTAagaaa
ccaaTTTTCAAGAACCTATACTTATCATTAGATGAAGCTACTCTTATATT
TGGATTCCGCCCTTATCAGGGTATAAAATATCTGACAGACCATAACATTA
TTGAAGAAGAAACGGAAGAAGTTGCTAAATTCATACATCACACATCTTCA
CTATCCAATAAATCTCTCACCAAGTATCTCAAAGACAAGAGAGAAGTGTT
GGATCTTTTAGTCATGTATATGAATTTTACTGGTTTTACCATATGTGACG
GGCTTAggaaatttttcaagaaaattcacCCACCAGAGGAACGAGGCAAT
TTCTTAGATGTCTTGATAGAGAAATTTTCACATCGATTCATTGAATGCAA
TCCCACGTCAGATCTCAACCAAGAGCATATATCTGTGTTGTGTTATTCAT
TGATGTTATTAAGTGTCGACTTGTACAGCCCACATGTTCGAAACAAAATG
TCGAAACGTGAATATATTAAGAACAATCATCAAGTTTTAAATGGTGAAGT
TAGTCGAGAGACACTTGGTGATTTTTACGACGATGTTTATTTAAATGGAC
ACATAGTGCCTTCTCATTGTAAACAAGTCAATAAACGGAAAGGTGGCAAA
CGACAGCATTGCTTTCCATTTTATAGACCCTATGGTGCCATCTTTGAGAT
AAAACCGATAGAACTGAAGCTGTTGAGTTGTAACTGCTGATAGTTTCGGG
TTTTAGATTGTATAGATATTTTTTGATACAGGGATGAAATATGTGGTCGG
AATTACTGATCTAACAACATTTTATGCCTCTAAAATGCTCCCTTCACATG
CTTTTTATAAGggaaattttataagaacgcgAGGCTTAGTTAGTGTCAAA
GTCCTagaataaatgaaaacaaaataaaaaagagaacttttcgaaaagtt
ttaAGAGCATATCAGACCATtcaattttatatccatacagaggGTGGATg
aacattttcagggggtaatCCGAGAGGAATTATCAGGGGGTCTAATGGAG
TGATTTTTTCCAcagggtaaaaagttattctaaagtTTTCAGGGGGTaag
agactgattttagttAGTCCCGTCATTATAAGGTATGTaagaaattttct
aaatttttttttgcaaattttgccattttccaggggtacCCATACATTTC
CAAgaattcttttttataattgaaaaggttcgtccaccccaaTGTACGGA
TTTTTTTAACGGGACAGCCATTTGTTATGAAAAACTTTCCTGTTCCGATT
GCTCAACTTCTTGGTCCGCAACCGATTTTcgttgaatttcaaattttctt
ctttatcttgAGCTTATTATTGcaactttcaatttttatcaagagacaaa
tttgttttagttcgaaaattatatttcatttgttttttctttcaatgaaa
TTAAATATGATTGTTAAATAGATTTTAATAGTAGTAAATATTGTAATTTA
TAGTTTTTCTTGTTGTCACTTatacataaattatttttttctttttcaac
agCTATTGTTTATAAAACCGAAATGCAAATTCACTTGCAAAGTAAGAAAA
CATCGTCGTATTTTGTTTAATGTAAAACTGAGCCCACTGGCGCATCCAAA
TTAtcttattataaatattttcaacaataccctaacaggaaaat
Run BLAST on NCBI

transcript from alignment at sc0000363:277573..284932-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020707 ID=TCONS_00020707|Name=TCONS_00020707|organism=Clytia hemisphaerica|type=transcript|length=7360bp|location=Sequence derived from alignment at sc0000363:277573..284932- (Clytia hemisphaerica)
TTTCTGTCTTTTTTTTCAGATTCCATATCCTAGTAAATTCTAGTAAAAGG
AATATTATTGAATAATAAAGTTATATATATTTTACAAAATAATTTGCTAC
AAGAATGTATTCATGTTAAACAAGATTACAGTGTAATTGAAGCGGAATTT
CTGTCAGGTGGCAAAGTTATACTTGATCAATGGGGCATAGTCACAGCACA
TTTCATCAAACCAGCAATGAAGCTCTGAATCTAAACAGACCTATGTCAAC
AACCTCGGGAAAAAGTAAAGATTTGCCACCAAACCTGGATAGATTTAATG
ATTTGACACAACTACCTCCTGAAGTTGCTGTACAAATTCTTTCAAATTTG
AATGCCACTGATTTGTGTTTGGCTTCTTGTGTTTGGAAGGATTTGGCAGA
AAATGAATTGCTTTGGAAAAAGTAAGTTTTAATATTAGAATCTTTTTATT
TTTTATTTTTTAAATGAAAAGATTGAAAATGGTTTCTTTGAAAATTTGTT
TAGAAAATGTTTTACGCAACTGATATTTATGGAAAAACTTTGTCTTGATC
ATTGTGCATCATTTGAAAGAGAAAAAGGGATTTGAAAATCTTGAGAGAAT
TCCAATTGAGACACAAAATATAATTTATTACCCTTTTTTCAGGCTTTGCT
TTTCCAAATGGGGATATACAAGCATTTATGGCAATTTGAAGTATTCTCAT
ATTTCAATCAAGCTTAAGGTTTGATTAATTTTTTTGTATATATTTTAAAT
TTTCAATCAATACAGGCCAATTTCCAAGGTCTTAAGGTTCCACCGTTTTT
ATCAAAAGATTCTAGAATATGTAGGTTCGAAAAATGTAGGGAGGTCTGGG
AGCACTGTTAACCCTGATCTGGTCCAAGGCAGAGTCATAGTGGAAGTGTA
GGGAGTGGTAGAATTAAGTGCTAAATTATTGAATACTTGATTGAAGAGTT
TCTTTACCTCTTTACCTTTTTCCACAGCCAATTTTTTTTCTTGAAGATTC
AACCTGATTCAATATAACAACTCAATTCAAGATTGAGTGACCCGGTAGCA
GAAAATCCCTGGAAGTTTGCCTGCAATTAACGGATCTTGGCTTCATTAAA
ACTAAGCCTTTTGGTTCACACACTCTTTAAATAAAATTTGACAATTTATT
ATTTTCTTTGAATCATATTTTTTTCTTTTTTTTTAGAAACCAATTTTCAA
GAACCTATACTTATCATTAGATGAAGCTACTCTTATATTTGGATTCCGCC
CTTATCAGGTACTAAATTACATCCTGAAATTTTAATGAATTTTTAGTTTT
TCTTCTTACAAATGATGAAGCAAGTTTTTCTGTCTTTATCCCATAGACTA
AATACCGTCCTTATTAGATTTGCATCCTAGTAACAGATAACAAGCCTTGA
GAGAAGAAGTTTCATAAAATTGGACTCTCTTTTTTGACATTTCGTCCAGT
CGTACCAAAGCAAATTTCCGTACTGGATATAACAGAGTGCTTCTTTAAAT
TGAAGCTTCATATTATTCTGTTTTCCAGGGTATAAAATATCTGACAGACC
ATAACATTATTGAAGAAGAAACGGAAGAAGTTGCTAAATTCATACATCAC
ACATCTTCACTATCCAATAAATCTCTCACCAAGTATCTCAAAGACAAGTG
TGTTTCCTTATTCTTTCAGAGATTCATAATGAACACCGAAGGAAAATTAT
TCAGAACACTGTATTTTGCTTGAATTATCTTTTCTACTTGCTTTACTCTG
GACATTCCTCTTGGTATTTTTGAAAAAGATTGTATTTTGTGGGCTTTGTT
TCACAGAAAAATGAATTCNTTGAAAATGGTTTCTTTGAAAATAGACGATA
TCGGCTTTGCCAAATTCTCCCCGAATGATTACCTATGATGCATTGCGCAA
AAAAATTCACGGACGATAACCCTAACCCTAACAATGCATCATGGGTAATC
ATTCGGGGAGAATTCGGAAAGCCGATATCGTCTATTTGTTTAGAAAATGT
TTTACGCAACTGATATTTATGGAAAAACTTTGTCTTGATCATTGTGCAAT
TTGAAAGAGAAAAAGGTAAAAATGGATTTGAAAATCTTGAAAGAATTCCA
ATTGAGACAATTTATTACCATTTTTTCAGGCTTTGCTTTTCCAAATGGGG
ATATACAAGCATTTATGGCAATTTGAAGTATTCTCATATTTCAATCAAGC
TTAAGGTTTGATTAATTTTTTTGTATATATTTTAAATTTTCAATCAATAC
AGGCCAATTTCCAAGGTCTTAAGGTTCCACCGTTTTTATCAAAAGATTCT
AGAATATGTAGGTTCGAAAAATGTAGGGAGGTCTGGGAGCACTGTTAACC
CTGATCTGGTCCAAGGCAGAGTCATAGTGGAAGTGTAGGGAGTGGTAGAA
TTAAGTGCTAAATTATTGAATACTTGATTGAAGAGTTTCTTTACCTCTTT
ACCTTTTTCCACAGCCAATTTTTTTTCTTGAAGATTCAACCTGATTCAAT
ATAACAACTCAATTCAAGATTGAGTGACCCGGTAGCAGAAAATCCCTGGA
AGTTTGCCTGCAATTAACGGATCTTGGCTTCATTAAAACTAAGCCTTTTG
GTTCACACACTCTTTAAATAAAATTTGACAATTTATTATTTTCTTTGAAT
CATATTTTTTTCTTTTTTTTTAGAAACCAATTTTCAAGAACCTATACTTA
TCATTAGATGAAGCTACTCTTATATTTGGATTCCGCCCTTATCAGGTACT
AAATTACATCCTGAAATTTTAATGAATTTTTAGTTTTTCTTCTTACAAAT
GATGAAGCAAGTTTTTCTGTCTTTATCCCATAGACTAAATACCGTCCTTA
TTAGATTTGCATCCTAGTAACAGATAACAAGCCTTGAGAGAAGAAGTTTC
ATAAAATTGGACTCTCTTTTTTGACATTTCGTCCAGTCGTACCAAAGCAA
ATTTCCGTACTGGATATAACAGAGTGCTTCTTTAAATTGAAGCTTCATAT
TATTCTGTTTTCCAGGGTATAAAATATCTGACAGACCATAACATTATTGA
AGAAGAAACGGAAGAAGTTGCTAAATTCATACATCACACATCTTCACTAT
CCAATAAATCTCTCACCAAGTATCTCAAAGACAAGTGTGTTTCCTTATTC
TTTCAGAGATTCATAATGAACACCGAAGGAAAATTATTCAGAACACTGTA
TTTTGCTTGAATTATCTTTTCTACTTGCTTTACTCTGGACATTCCTCTTG
GTATTTTTGAAAAAGATTGTATTTTGTGGGCTTTGTTTCACAGAAAAATG
AATTCNTTCCAAGGTCTTAAGGTTCCACCGTTTTTATCAAAAGATTCTAG
AATATGTAGGTTCGAAAAATGTAGGGAGGTCTGGGAGCACTGTTAACCCT
GATCTGGTCCAAGGCAGAGTCATAGTGGAAGTGTAGGGAGTGGTAGAATT
AAGTGCTAAATTATTGAATACTTGATTGAAGAGTTTCTTTACCTCTTTAC
CTTTTTCCACAGCCAATTTTTTTTCTTGAAGATTCAACCTGATTCAATAT
AACAACTCAATTCAAGATTGAGTGACCCGGTAGCAGAAAATCCCTAGAAG
TTTGCCTGCAATTAACGGATCTTGGCTTCATTAAAACTAAGCCTTTTGGT
TCACACACTCTTTAAATAAAATTTGACAATTTATTGTTTTCTTTGAATCA
TATTTTTTTCTTTTTTTTTAGAAACCAATTTTCAAGAACCTATACTTATC
ATTAGATGAAGCTACTCTTATATTTGGATTCCGCCCTCATCAGGTACTAA
ATTACATCCTGAAATTTTAATGAATTTTTAGTTTTTCTTCTTACAATAAT
GATGAAGCAAGTTTTTCTGTCTTTATCCCATAGACTAAATACCGTCCTTA
TTAGATTTGCATCCTAGTAACAGATAACAAGCCTTGAGAGAAGAAGTTTC
ATAAAATTGGACTCTCTTTTTTGACATTTCGTCCAGTCGTACCAAAGCAA
ATTTCCGTACTGGATATAACAGAGTGCTTCTTTAAATTGAAGCTTCATAT
TATTCTGTTTTCCAGGGTATAAAATATCTGACAGACCATAACATTATTGA
AGAAGAAACGGAAGAAGTTGCTAAATTCATACATCACACATCTTCACTAT
CCAATAAATCTCTCACCAAGTATCTCAAAGACAAGTGTGTTTCCTTATTC
TTTCAGAGATTCATAATGAACACCGAAGGAAAATTATTCAGAACACTGTA
TTTTGCTTGAATTATCTTTTCTACTTGCTTTACTCTGGACATTCCTCTTG
GTATTTTTGAAAAAGATTGTATTTTGTGGGCTTTGTTTCACAGAAAAATG
AATTCACTTTCAGTTTTCTCATACCACTTCTTATTTCAAAAAAATTACTG
ATTGTCCTTAGAAAAAATCAAGACCAGTACCTATATTCAAGGACTTGAAG
TGATTTCTCATAGCTCTTCTTCTTCCCTTTCAGGAGAGAAGTGTTGGATC
TTTTAGTCATGTATATGAATTTTACTGGTTTTACCATATGTGACGGGCTT
AGGTAAAGTTTGTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAAC
CTGTGTTTGTTCGTCCGTCCGTTCGTCCGTTCGTCCGTTCGTTCGTCTGT
TACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTTGATTTTTGGTAC
AAAGGTGCAAAATGGTGATGGCCAAAATGTGACGGAGCCCGATTTTCGAA
AAAAAAAAATTTTGGGGCCAATTTGGGCAAAAAAACGGATGTGAATCCGA
ATGTGAAAAATTGGATCATTAATTTTTTCAGATTTTTTGTACGAAAGTAG
GGTACCATCATAGGTAAAAGATGGTTCAAGCAGATTTTTGCAAAAAAATT
TTGTTGGCTCAAAAAACGCATGTTTATCTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGAAATTTT
GGTTTCTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTTGAGAGAT
CGTCACTATTTGTGTTCTGAATGATTGTTTAACGGTCATGTAGGTAGATA
TCAATTATATTTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCAC
TTGTTTGTCTTGTATCCAAGATCAAGCACTTTGAAAATATTTTGACACTA
TCCACATCTCAAATATATAAACTCCAGAGCTACCTTTGAAATTTCTATGG
AAGGTAGAGTCCTAGAGTAATAATTTTCAATCTTTTTTTTTCTGACAGGA
AATTTTTCAAGAAAATTCACCCACCAGAGGAACGAGGCAATTTCTTAGAT
GTCTTGATAGAGAAATTTTCACATCGATTCATTGAATGCAATCCCACGTC
AGATCTCAACCAAGGTAAAAAAGGAGAAAGTTTTGATTAAAATTTATTTC
TTACAGGGGAAATTTTATTTAAAATTCTTTTGCTTCTATCCCTATCTTAA
AACATAATGCAATAAACTTGAAATGTCAGTCAGTTTTTAAACTCTTAAAT
CTTCTAATCTTGCAACTCTACATGTGCAAAACATTCTGACACCTTTCTTT
AGAGATAGGATAGATAATAGGTCAGAATCGCTGATTGACAAAAGATTTTT
TCCTCTCTGAACACTAAGCAAAGAAATATAGTTTCAATCAGCGATTCCAA
CTTTCTTATTATTCCAAACTCTGAAAAGGTTGTCGAAATTAGATGATTTA
GTCGACATCAGACCAGCTTACGGTAGATATTCATTGCATATTCAACCTTT
GACCTGAATGTTTATTTAATAACATGATTATATTTTGTGTGTTAATCATA
CTAAGCAATATTATCTTGTCATAATCTCTTTTATTTTAGAGCATATATCT
GTGTTGTGTTATTCATTGATGTTATTAAGTGTCGACTTGTACAGCCCACA
TGTTCGAAACAAAATGTCGAAACGTGAATATATTAAGAACAATCATCAAG
TTTTAAATGGTGAAGTTAGTCGAGAGACACTTGGTGATTTTTACGACGAT
GTTTATTTAAATGGACACATAGTGCCTTCTCATTGTAAACAAGTCAATAA
ACGGAAAGGTGGCAAACGACAGCATTGCTTTCCATTTTATAGACCCTATG
GTGCCATCTTTGAGATAAAACCGATAGAACTGAAGCTGTTGAGTTGTAAC
TGCTGATAGTTTCGGGTTTTAGATTGTATAGATATTTTTTGATACAGGGA
TGAAATATGTGGTCGGAATTACTGATCTAACAACATTTTATGCCTCTAAA
ATGCTCCCTTCACATGCTTTTTATAAGGGAAATTTTATAAGAACGCGAGG
CTTAGTTAGTGTCAAAGTCCTAGAATAAATGAAAACAAAATAAAAAAGAG
AACTTTTCGAAAAGTTTTAAGAGCATATCAGACCATTCAATTTTATATCC
ATACAGAGGGTGGATGAACATTTTCAGGGGGTAATCCGAGAGGAATTATC
AGGGGGTCTAATGGAGTGATTTTTTCCACAGGGTAAAAAGTTATTCTAAA
GTTTTCAGGGGGTAAGAGACTGATTTTAGTTAGTCCCGTCATTATAAGGT
ATGTAAGAAATTTTCTAAATTTTTTTTTGCAAATTTTGCCATTTTCCAGG
GGTACCCATACATTTCCAAGAATTCTTTTTTATAATTGAAAAGGTTCGTC
CACCCCAATGTACGGATTTTTTTAACGGGACAGCCATTTGTTATGAAAAA
CTTTCCTGTTCCGATTGCTCAACTTCTTGGTCCGCAACCGATTTTCGTTG
AATTTCAAATTTTCTTCTTTATCTTGAGCTTATTATTGCAACTTTCAATT
TTTATCAAGAGACAAATTTGTTTTAGTTCGAAAATTATATTTCATTTGTT
TTTTCTTTCAATGAAATTAAATATGATTGTTAAATAGATTTTAATAGTAG
TAAATATTGTAATTTATAGTTTTTCTTGTTGTCACTTATACATAAATTAT
TTTTTTCTTTTTCAACAGCTATTGTTTATAAAACCGAAATGCAAATTCAC
TTGCAAAGTAAGAAAACATCGTCGTATTTTGTTTAATGTAAAACTGAGCC
CACTGGCGCATCCAAATTATCTTATTATAAATATTTTCAACAATACCCTA
ACAGGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011613XLOC_011613Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020707-exon-sc0000363-1575043694:284512..284932TCONS_00020707-exon-sc0000363-1575043694:284512..284932Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1575043694:284215..284290TCONS_00020707-exon-sc0000363-1575043694:284215..284290Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1575043694:283675..283746TCONS_00020707-exon-sc0000363-1575043694:283675..283746Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1575043694:283286..283404TCONS_00020707-exon-sc0000363-1575043694:283286..283404Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1575043694:280381..280449TCONS_00020707-exon-sc0000363-1575043694:280381..280449Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1575043694:279319..279434TCONS_00020707-exon-sc0000363-1575043694:279319..279434Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1575043694:277573..278843TCONS_00020707-exon-sc0000363-1575043694:277573..278843Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:284512..284932TCONS_00020707-exon-sc0000363-1510915933:284512..284932Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:284215..284290TCONS_00020707-exon-sc0000363-1510915933:284215..284290Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:283675..283746TCONS_00020707-exon-sc0000363-1510915933:283675..283746Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:283286..283404TCONS_00020707-exon-sc0000363-1510915933:283286..283404Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:280381..280449TCONS_00020707-exon-sc0000363-1510915933:280381..280449Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:279319..279434TCONS_00020707-exon-sc0000363-1510915933:279319..279434Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1510915933:277573..278843TCONS_00020707-exon-sc0000363-1510915933:277573..278843Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:284512..284932TCONS_00020707-exon-sc0000363-1491911889:284512..284932Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:284215..284290TCONS_00020707-exon-sc0000363-1491911889:284215..284290Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:283675..283746TCONS_00020707-exon-sc0000363-1491911889:283675..283746Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:283286..283404TCONS_00020707-exon-sc0000363-1491911889:283286..283404Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:280381..280449TCONS_00020707-exon-sc0000363-1491911889:280381..280449Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:279319..279434TCONS_00020707-exon-sc0000363-1491911889:279319..279434Clytia hemisphaericaexon
TCONS_00020707-exon-sc0000363-1491911889:277573..278843TCONS_00020707-exon-sc0000363-1491911889:277573..278843Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000363supercontigsc0000363:277573..284932 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2.49515e-10	0	0	0	0	0	0	0	0	0	0	0.483366
Blast
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BLAST of TCONS_00020707 vs. Swiss-Prot (Human)
Match: FBX8 (F-box only protein 8 OS=Homo sapiens GN=FBXO8 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 6.567e-73
Identity = 126/263 (47.91%), Postives = 170/263 (64.64%), Query Frame = 3 
Query:  294 FNDLTQLPPEVAVQILSNLNATDLCLASCVWKDLAENELLWKKLCFSKWGYTSIYGN---LKYSHISIKLKKPIFKNLYLSLDEATLIFGFRPYQGIKYLTDHNIIEEETEEVAKFIHHTSSLSNKSLTKYLKDKREVLDLLVMYMNFTGFTICDGLRKFFKKIHPPEERGNFLDVLIEKFSHRFIECNP----TSDLNQEHISVLCYSLMLLSVDLYSPHVRNKMSKREYIKNNHQVLNGEVSRETLGDFYDDVYLNGHIVP 1061
            F +L  LPPE++  ILS LNATDLCLASCVW+DLA +ELLW+ LC S WG+ SIY     L +S          F+ LY+ LDE +L F   P +G+ Y     I+++  +E+AKFI  T +L+ K L  YL ++R+VLD LV   NF    + + LR+FF+ IH PEERG +L+ LI KFSHRF  CNP       L+ + + VLCYSL+LLS+DL SPHV+NKMSKRE+I+N  +     +S + +G  YD++YL GH+  
Sbjct:   68 FINLEMLPPELSFTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFS----------FRKLYMQLDEGSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQN-ISEDFVGHLYDNIYLIGHVAA 319
The following BLAST results are available for this feature:
BLAST of TCONS_00020707 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBX86.567e-7347.91F-box only protein 8 OS=Homo sapiens GN=FBXO8 PE=2... [more]
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