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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020316 ID=TCONS_00020316|Name=TCONS_00020316|organism=Clytia hemisphaerica|type=transcript|length=1438bp
caaatatataaaaaattaaagaagaaaaaaattttcttttttgacacaat
ttttgaatttttccaagctattttcctaacctttttttgacatttttagt
caaattttcgacactaaaatttgaatatctttacaaccacttatcatctg
gaggcctatgacccctcattttctttttaaaatttgaaaaatcttctgga
gctGCTACCATTAATAGTATAGCACAAGGCCTGGATCACCAATAATTTGT
GTTTGCGTCATTCCCAGCCCCAAAATATGAGTCAGTCGGTCTTAAATGAT
CGGAAAAGGGCGCTCTGAATATAGGCTGTCAGGTGGTGCTAAAATCATCA
GAAAAATGTGTCTGAGCATAGGTTTGTTCAGGCGACAAGAATCATCAAGC
ACGGGAGCTACAAAATGTGATTATTTTGCTGCAAAAATGTGATTATTTTG
CATATCCCGACCGCTCAAAAAGCAGTTGCGTAGTGCTTTTTAACGCAAAA
AATCCTTGAAAAGTTGCAAATAAAAGTCTTAAAAACACTTGATGATCAAA
ACGCTGGCTACACTGAAtctaaaaaattctttgaataatatcgctaaaaa
atctgacaaattttccCACTTTCCGACTAGAAAAGGGTCGGATTTTTTAG
ATAGAAAGTGAGTTGGTCGGAGGACGCGAACACAGCTTATTGGTGAGCCA
GGCCCAATTGAATAGTACCCAAGATTCAAGTGAGTTTTGATAGCAAGTTT
TGGGGATTTCAAAGTTTGTAAATATGAAAGGTGACTTTCATTGAGCTACA
GTAAATCTTGGTACCATTTTCAAATTCCCCCAactttctttttctcaaaa
atgatgaagaagaaattgGCGGCATCACGATTAGATCCGCTCTGCATGAT
GCATGACGTCACCCATGTGGcaaaatacaacttttttgaaagaaaattta
gttataaaatttgaaaaaaaattaggaaaaatttacaaaactgAATGCta
gaaattttcaagaaaagtgtagaaataaatcaaaatgccTGAATAAGGTT
TctagaaaaggaaaatttgcTAGGAAAAACCTTAGAAAACGAATGACAAA
AATATACCACAAAAATAtcacaaaataaattaaaaaatattaatttacCA
GCAGGTAAAACTAGAATACTGTGTATTCTCCATATGCACAGGATAAATAA
TATGTGATGATACAATGTTAATGCTAGTATCACAAACGAAAAATACCAAG
CCACAAAAGTAAATTTAATGGCTGCCTGAACTCTTAGAGACCACCGTCAA
GAACCTGCTTAGGGGCTTACAAGCCATGAGTATACCAAAAAATAGTTACA
TAAACACATGGGTGTTGAGTTATAAATTGAtagagtgaatttttttaatt
tcacatgATACATTTACTGCGACTGTTTGATGTAAATG Run BLAST on NCBI transcript from alignment at sc0000351:150288..151725 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020316 ID=TCONS_00020316|Name=TCONS_00020316|organism=Clytia hemisphaerica|type=transcript|length=1438bp|location=Sequence derived from alignment at sc0000351:150288..151725 (Clytia hemisphaerica)
CATTTACATCAAACAGTCGCAGTAAATGTATcatgtgaaattaaaaaaat
tcactctaTCAATTTATAACTCAACACCCATGTGTTTATGTAACTATTTT
TTGGTATACTCATGGCTTGTAAGCCCCTAAGCAGGTTCTTGACGGTGGTC
TCTAAGAGTTCAGGCAGCCATTAAATTTACTTTTGTGGCTTGGTATTTTT
CGTTTGTGATACTAGCATTAACATTGTATCATCACATATTATTTATCCTG
TGCATATGGAGAATACACAGTATTCTAGTTTTACCTGCTGgtaaattaat
attttttaatttattttgtgaTATTTTTGTGGTATATTTTTGTCATTCGT
TTTCTAAGGTTTTTCCTAgcaaattttccttttctagAAACCTTATTCAg
gcattttgatttatttctacacttttcttgaaaatttctaGCATTcagtt
ttgtaaatttttcctaattttttttcaaattttataactaaattttcttt
caaaaaagttgtattttgCCACATGGGTGACGTCATGCATCATGCAGAGC
GGATCTAATCGTGATGCCGCcaatttcttcttcatcatttttgagaaaaa
gaaagtTGGGGGAATTTGAAAATGGTACCAAGATTTACTGTAGCTCAATG
AAAGTCACCTTTCATATTTACAAACTTTGAAATCCCCAAAACTTGCTATC
AAAACTCACTTGAATCTTGGGTACTATTCAATTGGGCCTGGCTCACCAAT
AAGCTGTGTTCGCGTCCTCCGACCAACTCACTTTCTATCTAAAAAATCCG
ACCCTTTTCTAGTCGGAAAGTGggaaaatttgtcagattttttagcgata
ttattcaaagaattttttagaTTCAGTGTAGCCAGCGTTTTGATCATCAA
GTGTTTTTAAGACTTTTATTTGCAACTTTTCAAGGATTTTTTGCGTTAAA
AAGCACTACGCAACTGCTTTTTGAGCGGTCGGGATATGCAAAATAATCAC
ATTTTTGCAGCAAAATAATCACATTTTGTAGCTCCCGTGCTTGATGATTC
TTGTCGCCTGAACAAACCTATGCTCAGACACATTTTTCTGATGATTTTAG
CACCACCTGACAGCCTATATTCAGAGCGCCCTTTTCCGATCATTTAAGAC
CGACTGACTCATATTTTGGGGCTGGGAATGACGCAAACACAAATTATTGG
TGATCCAGGCCTTGTGCTATACTATTAATGGTAGCagctccagaagattt
ttcaaattttaaaaagaaaatgaggggtcataggcctccagatgataagt
ggttgtaaagatattcaaattttagtgtcgaaaatttgactaaaaatgtc
aaaaaaaggttaggaaaatagcttggaaaaattcaaaaattgtgtcaaaa
aagaaaatttttttcttctttaattttttatatatttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020316-exon-sc0000351-1491911889:150288..151725 | TCONS_00020316-exon-sc0000351-1491911889:150288..151725 | Clytia hemisphaerica | exon |
| TCONS_00020316-exon-sc0000351-1510915933:150288..151725 | TCONS_00020316-exon-sc0000351-1510915933:150288..151725 | Clytia hemisphaerica | exon |
| TCONS_00020316-exon-sc0000351-1575043694:150288..151725 | TCONS_00020316-exon-sc0000351-1575043694:150288..151725 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000351 | supercontig | sc0000351:150288..151725 . |
Blast
The following BLAST results are available for this feature:
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