TCONS_00020281 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020281
Unique NameTCONS_00020281
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1290

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020281 ID=TCONS_00020281|Name=TCONS_00020281|organism=Clytia hemisphaerica|type=transcript|length=1290bp
TTTTAGTatagtgaaaaaatataaaaaaagattaCTGTATTTGAACCACA
TTTTAACCAGAGCTGTTAGTCATGGAAGAAATGGAAACAAAGAAGCATCC
ACCAACTACATTCAATGAATGGTTTGAGTTGAATAATTTTGAAGAATGGC
CTCACCACGTGGAAGAAGAAGATGACGAAACAGAACTTCACCAAACACCT
GCTTATCTTGGCATGTCAACCATGGAAGAGATTGTACAACAAATTAAGAC
AAGAGCTCCCTTTCAGATTAATATTTTAGACGAGTTACTGGAACAAACTT
GCCAGGTTGAAGAAAAGATTTTAGAGTTTTCTTCACTCTTTTTTAATGAG
AAGTTAATACCAAGGAAACAGAGGAATGGTATATCTCAACTTGAAGTCGC
CAAGTACAAAGGATCAATTTTGATTGAACAAGATAACGAGGATAGAAAGA
ACAGGatGAAAGAGCTGTTTATTGATAAAGTCCGGAATATTGAGACTGTG
GCATATCCTGGCTTTTATTACCATGAGAACACACCACTCCCAGGCGCGCT
TGAAGCACCTCATCTAATGAACCATGTCACCTCATTGCAAGAATTTAGTA
ATGGTTTTCGTAAGATGTGgaggaagtatttcttatcagaATCATCTGTG
GCAATCATGCAGGATGCATTTTGGTGGATATTCTTGCAGTTTAAGGGCGA
AGagTTCTTCGCAGACTGTTTGAGTCAAGCGTTGTACGCAGCATTTAGTA
AAGCGTTCCCTGCATCCATAAACAAATTCAATCATCAATTCCGAAGAAGA
ATTGTTTCACTTGTTTACGAATGGGTCACAGGAACACAACCTCACGTGGA
CGAAATATTACACCAGTGGGATTTAGAAAGTCTTGACAATAGAAGTCAAA
ACAAAGAAGTCTTAGACGATCATGCATTGAAGACTTCCTTCTCATTTGAT
GAAAATACACTGATCTTGCCTAACGAGGCTTCACCACCTTCAACCAATAA
GAATCATCATGCAGAAGATGATGTCATGTTTGGAACCAAGAAACCCAACA
AGAAAATTAAAGAGtcACATCCATCAGGTGAAGGGCCTCAGTTCGAGAAA
ATTGCGTTCGATATTCATGGTCGTTCACCTTTCATTATGCATTACCTCGC
CTCTAAGGAACTACAAGCTGAAGAAGAATCTTTAAGGAAAATTGTGACCC
GGACGCAGATGGTACCTAAAGAAGATCTTTCTCGACAGAATGAAACATAT
CGATCGATTATTGACAAGCAGAAGAAAGCATCTAACGTCA
Run BLAST on NCBI

transcript from alignment at sc0000351:72998..90991+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020281 ID=TCONS_00020281|Name=TCONS_00020281|organism=Clytia hemisphaerica|type=transcript|length=17994bp|location=Sequence derived from alignment at sc0000351:72998..90991+ (Clytia hemisphaerica)
TTTTAGTatagtgaaaaaatataaaaaaagattaCTGTATTTGAACCACA
TTTTAACCAGAGCTGTTAGTCATGGAAGAAATGGAAACAAAGAAGCATCC
ACCAACTACATTCAATGAATGGTTTGAGTTGAATAATTTTGAAGAATGGC
CTCACCACGTGGAAGAAGAAGATGACGAAACAGAACTTCACCAAACACCT
GCTTATCTTGGCATGTCAACCATGGAAGAGATTGTACAACAAATTAAGAC
AAGAGCTCGTATCTTTTTCCAACTTGACTGTGTGTACATTGGTTATCTTT
AGAATGGACTatccacaaaaaaaaacattgtaccctcctatgttgaggag
gtctttttttTCAACCTCATTTTTAGACCACTTGGATTTtccacctcatt
ttactgaccaccctgtaTTTTAACGCTCGAAAAACCAGACCCCTTGACTT
TTTATTCTCCATCGCCACACCCGGACGTCACACTTTCTCAACATAAGGGA
TTGCCGACTATTTCGGAATAGCCTAATGCATGACCAAAAGGGAACCCTTT
TATTTTAGCAGTCTGTGGTGGAGAAAAATCGCCAGTTGGTGTTCGGGTAA
AAACAGACAAGGATACTTGCTTTGTACATTTTAATCTGTAGATGACTGTA
TGAATAACGAGTTTAGACTGTAAGAACCATTTTCCTCCTAAAAATATtac
agtttttttattttggtgttGTCTGTCCAGGTCCGTCAtattactaaaat
aaaaacacgttttgaaatttatttctaGGTAGGTGTGACCATTTAAGTTT
CTTGTTATAATTGCTGTATAGAACgaaagtttaaattcaaagcctcttgt
ttttttttgccacCAGTATTTTAAGAGCTAGAAACGATGTTAGGGCTGAT
GTGCAATGGACATTTCTATAAATTCCTTGACTTAATTTTTGCTTGCAGCC
TTTCAGATTAATATTTTAGACGAGTTACTGGAACAAACTTGCCAGGTTGA
AGAAAAGATTTTAGAGTTTTCTTCACTCTTTTTTAATGAGAAGTTAATAC
CAAGGAAACAGAGGAATGGTATATCTCAACTTGAAGTCGCCAAGTACAAA
GGTATGTTTTATGATTGTAATATAAAGGTATTTTGTATGATTCTAAAAGC
TGTTATTTTCACTCAAACAGTCTCTTtatgttttcaagaaaattgatttg
cAGTCAATTTGAAAtactttttgtcaataatttgtaTTTGACAGTCAATA
AAACTTAGTGACACGAAAAACATTGCATATGGGCCTGATAAATGTTCTTG
ACCTAAGTGATGTTGTAGAGTGGAGTTGCCTTTTTAGCCGCCAGTACCCG
ACAATACGACGATATGTTCGATTGTACGCTGATGTACGTGTATGTGCGCC
AACATGATCAGAATGTAAATTAATTTGTTGGCGAAAAGAGCTTCATTCGT
CACCAACCCCTTATTATTTAATCCacaattatttttatcattttgaaatt
aatttcttttgcaGGATCAATTTTGATTGAACAAGATAACGAGGATAGAA
AGAACAGGGTGAGAAGTCTATTTTTCAACGTCAATACTTTCAAACTCTTC
TACGCTGACTGAACACATGACAAGTTTTTTCATAAATAACACCTATGGGC
GGGCTGATACAGGCTAAATATGACGGCGATGCTAAGTTTTTTGTGCAATC
CGTCATTTATCGCTCCGATTCTAAGGCTAATGATGACTTCATGTACAAAT
TACAGACcctcataacttttgatagtaaAATACATTGAAGTCATTTTTTA
TACATCAAAAATAGTCAGAATTACTTTTTTCACGGATGTGAACCATTTTT
GACGCTTCCCCAAAATGAGTTTTGTTGCTATGGcaaccaatgacgtcatt
ttggcctGACTTATCTATATtttaaaatcaaaccaaaacacTGAAATCCT
TGGAAAAAGTTACtctcaaaagattttttggtCCAGGATCCAGGAAGCAT
GATAGACCCGGTTCATTTTGTACTTAGCATCACTGCTAGTGAAGCACTCG
TTTTAGGTCTAGAGAAAGAAAAGGTCGAAAGATGTTTTAGGGAGTTATTG
TCTCTATCTACCTCGAGGgactatttttcaattttttacaacataatatt
ttcctttttttagatGAAAGAGCTGTTTATTGATAAAGTCCGGAATATTG
AGGTAACTAAAGTTAAGTTATTCTATTAATTTCATAGTGGGCACCCTCCT
CTGGATTCTGAGGGGGGGGGTCAGGTTGAGGCTCGAAGATTTTACTAATT
TGTTTAGGGATTGTTGAAAAGGTAGGGATTGGGAAGATATTTCAGGTGGG
GGGTAACTCTATGTAGGGTGGGgtgacctttttcaggtgggggttggagg
ggtgttgcCCATTATGAATTTCTTAAACAAAAAAACCTGACTCTGACTCT
TTTCTGCTATACTGTTGGTGAGAGAGTCAAACAACACCTACACACCCCTT
CTCCATAACGTTGTAAAGTGACAATAATTATGAatgaacttttgaatttt
tgaattttttgttgaaaataatgTTTATCTTTTCATCTCTAAAACATTCT
TTGTTTTTTGACATGATATAGAGAAATCCCAAAATTCATTACGTGTAAAA
TAAATTGCTACCATGGCTTAGGAAatatggacatgttttttaattgtttc
gtttaTAGGGGTCTTGGGAAATCATCATTCATTtctaatataatgaatga
actaAAATTATGCCCTGATGATGGTTGCGTGGAAAAGATGaacttcaaaa
atttaaaagaattttttgcaaAGCTTAAATCTGTCATGACTTATGCTTCA
ACAAAGTGCGGTCCAAAAATGAGCCAATAGCAATACTTAGCATTTTAGTA
GGAGCAAATACTTAGCATTTGGATTTAGAGGCTTTGTATCTCTCTCAATT
TTTCTGCTATGACTCTAATACTTTGCACATGCCTTTTTATACCTTATAAG
ATCAATATACCAACATAAGCAATCACTAAAAATGGTTGTATGGTCCCATT
ATGAGCGTGTTTTTAGCATTGGGTATGGCTTTTTTTTAATCCACCAGCAC
AgttaagataaacacaaaagaactaTGATATTGATATTATGCATATTTGA
GGCattcaaaaagatagaaaaaccaAATTTGGCCGATATAAAGCATTCCA
GAGTCCTTTTATGAGCAAAAATTTAGCATTGACTGGACTTAAGTTCTTGA
AGGCCATCTCTttatgctaaaatttgaaaacccgAAGGTTATTGTTATTC
CATAGCTCATTTAGGTGCTATTTGATGCTTGGATCATTCACGAAGCTTAA
AAAGTCTTTTCTGTGGTCTTTGTCATAGTTAAATGGACCAAAAATGAgca
gtattttagcattttaacgGGAAATGTTAAATATTTGCTCGATTCTGGAC
CCTGAAAAGGTTTTCATCAAATAAGTTATCATTAATGTTTGATACACAAT
TGAACAGAACTTCATGAGGTTATTTTATGTTCCTAGGTCTCAAAATGAgc
tgaatttagcaaaaaattaGACTAGGTGTAAAGTTAATTTTAGTAAGAGA
AGCAGAATAAATTGCAGTATTTCCAGTGGAAAATGCTAAATTGAGCTCCA
AACGGGCCCTTTAACAGCTCAAATGTTTTATTGGTGTTGAAAACTTGATT
ATTAAACTACTTCAAAggaagttatgaaggttttacACCCACTCCAGCCT
TTTAATTAGGTGTTTAGAAACTAACTAGTAATTCTGCTGCAgtattttta
gtggaaaaatgctaaatttagctccaaacCGGCCGTTTAACAGCTCAAGT
GTTATATTGGTGTTAATAACTTGATTATTCAACTATTTCAAAAGTATATT
TAGTCAATTATGACGTATTGGATGGAAATATGTAGCATTTTaacagagat
ttcatttccataatggtggatgtaagcaaatcccagactcaaatgcattt
gttttcccaggagaattcacagaatactatcacttcaaagaaatttgggt
ccatgtctattgccatttcagAGCAGTTTTTANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGCCATTTCAGAgcagtttttagtcaaaaatggagtttttgc
ttgaaatgttgcattttagccagttttagcacatatttcaattccataat
ggcggacattaTCCTAAACGCAaagaattttgatttccctggagtatttc
cagaaggctatcactgcaaaaagattttaggttcatgtttattgccattt
ttaagatttttccagtcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNcaaaaatgggatttttgcttgaaatattgc
gttttagcaggaatttcaattccaaaatggtggatatacccaaatcccaa
acccagatgattttgattttcctgcattatttccagaatactatcactgc
aagaaaattcgggcccatgtctattgtcattatagagattttttcagttc
aaatttgggtttttgcctgaaaaaatggctcttagcagggattttatttc
cataatggcggacatagacgcatcccagacccaaatgattttgatttccc
tggagtatctccagaatactatcactNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naccttaaaaattgcgcagaatgcctcacaataggttaaattttcataaa
aaaacactacatcttgaattttctgactttgacatttgacgccccaccct
atTATTGTCAATGGGGAAATAGGTGCTAAAAAGTGCTCTAAAAAGGGCCC
CACAATAGGAAAATGTGGGCCTTTTAACAATAGGCTGCTTTGATTGCCAT
CCCTCTATGAGAATCATTGGTCAGATAGACAACTTCCTGGGTTTTTAGCT
CTGATTTAGATCATTTTCCGAAACACATACAAATGCTAAAATTTGCTCCT
AACCGGCCCCTACAACAGCTAGAATTTtgggaaaagaattttttgtgGTC
CTATCATCACTACtaacatcctgtgaaaattttgGACCTCCAAGTTACCC
CAATCAAAATatagcttttttgaaaatgccaaaaacaaaacaattaaaaa
acatgtccatatagtgttttcggcgctttaaaagttttttatatttacgg
attttaagtttgccttgctTGGAATACTGtcattcagtcacaacttacca
tcagatttatcctagtgaTTGGGTCAAGCTAGCTTAGTTTTCCAGTTGCT
TCATGCAAAAGAACATTTCActgtcgcaaagcgtaatgggtaatcaggaa
cactgcgcgctaatgacgagTTACTATTGGTCTAAagttttgaaacattt
tgaagattattgcgtctagccaacagaaAGCCGTTATGGAAGTGTCCTGA
TTACCCaagatccatttcgactgtgaaatggcctatttcaacgaaattct
gaaaaattggttaacaatattgacaaaaattttatcataacaGTTTTATT
GACTTTTTCAGACTGTGGCATATCCTGGCTTTTATTACCATGAGAACACA
CCACTCCCAGGCGCGCTTGAAGCACCTCATCTAATGAACCATGTCACCTC
ATTGCAAGAATTTAGTGTAAGTGGTGGACTGGCTTTGGTATCAGTGCAGG
GCTACATAcatacacaatatattgtcaggcaataaaTTGACGATATATTG
ATCAGTGCCGGCAAtttattgaaaaggtgtccgcaatatattgccagctc
gatttgcaatctTTCACCATAATAGGgggattttttacagaaagaaaatt
catttttatgaTAGAGTACGTCTGTTGTtaacttcgtacattacggtccg
caaaccatattgtcaaatattgtacgtcaatatattgtgtagtatAAGTA
GCCCTTGGGCAAAGACTCTCACAATGAGAGTGACGCCCCCCAAACAACCT
CAACAACTGGAACTGTAGTATAAGTAGCCCTTTTACCAAGCCATTTTTTT
GGTATCTTGGTGCCAAATTATTACTGTACATAGACGTGTCttgtttttgt
aaaatctgTTTTGCATAAGTTATTACTTAAAATTGACAATAAATCGTATT
ATTTATTTgaacagtagagtctccataactcgaatctcTACTGCTCGAAc
gtctccttaattcgaacgaaTTCGTTGACACCGTGAGAACTTCTGATAAG
CTCTTATAAAATAACCGCTACTAAAAAGTTCTCGAATATTCCACATTTCG
TACTGTCAAGAAagatttccattgttttagaCTATAATTAATTCATTAGT
TCTCGGTTTTACTCGGTTTTACTGTATTAAGGCCGTTCTCCACTTACACG
CTCTGGGATctcactttttcgagcaaagcttccacgctgatgctaatcaa
aaatagtgtgacattgtaaaaaatgctcaaaatcaacttttggAATAACT
CTTCATAGTTTTTTGAGTCAGCCATAGAGATTTCACAGGGTAATAGACCT
CAACGTGGagatatgattaaaaaaaaaattgttatttgagtcaaaattgt
gactgcagttcaaaaattttagtttttttttaagtgtaaGCCACACGATA
TTGAAAAGTGATCTCTGAATGGGACCTTCTAGACTTGAAAGAAGAAAGGC
TGAATTTTCCAGAAAGtgttaaatgtacatactttTGCGTTGTTAAATGT
ACTTTTTTGTCAGCCACAATATTTTACTCACACTTTATGCTTTAATATAT
TTAAGTTGAGTAAGCCACAAaatttcgttctttttgcaaCAGGTAGATAA
ATTATTCAGCTTAACCATGGATGTATTTTGACATATAAGCCACATGATGG
CCTCACTCTATGAGCAAAATAGTGGATGAcatcaaaaatgtcacaaaaca
ggggttaatttttgattagcatccgctatttgtcaaaagaaaaatgaagc
aattccattggcgcgatctgacgtaacggttgaaaaaagttgaaatgcat
TGAACTTTTCTTTCGAATGcgtgcgctacatttttatgacgtaatttttt
tttttccaagcaaaaaggattgaagctagacggtgcgatcgcagcgcgcg
cagaTGGAGAGCAGCCTTTCTTCATGATCATTTTCATCTCTGTTTAGAAT
GGTTTTCGTAAGATGTGgaggaagtatttcttatcagaATCATCTGTGGC
AATCATGCAGGTTGGATGTTCATTCAATCCGGACCCCATTCGGAATCCCC
TTCTTTGGGattttatatcaaaattaaaaCTGCTTATATCTTCAATTCCG
ATTAAACTGGTCATTTCTTCGGTAGTAAACATCCCCCTTCTAACAGACCC
ACTGAGAACCCTTCCCTAAGGAAAAATTAGCCTTAATATCGTTCCAGTGA
AAAACTATTATACCATATAGTTTTTGTctaactgcaaaatattgtgctat
tttttcaatCTCCACTGAACTTTCTAGCTAGAAAACAATAggattcaaat
ccccagccataaaaacatgggaatatcaatcccgtCGAGTTTTGaaccgt
tatttttacccccactggctgataaaatctcaccgggtctgtgagaaggg
ggcgtTAGTAAGTGGTCATTATAACTTTGATTAGCATAtaacttttaaga
aaaaatagatAGGGATAGATAAACTTCTTTAAACTTGGGCAAAAAGATGT
TTCACGAAAAGCTCTAAACATAAAACAAtactccgttttcttgctctcAA
ACGTTCAAAAATCAATATGAATACTCTCGATCTGTAACGGAAATCATGCC
GAGCTATATGAGACCGTAACGTCTATGAACATGGTCACAATTTCGTAATT
TGTTAATCACCTGAAATTTTTGGTTAAAGTTGTATTTAAATGCATAAATG
ATTTTCTCTTTTAATGTAAAGGATGCATTTTGGTGGATATTCTTGCAGTT
TAAGGGCGAAGaggtaattatcatttttatcatcTTTAATCCCTGGCTAG
GTCTTATCAGCTAAAGATATAAGTTGAGTTTGAGTATGGTTTCTCTCTGC
TTTGAAATTATaaggtaagtggagcaatcaaGGCAGAGAAGGAGCGCCCT
TCActaccttcaggtagatagctTTTGCAAAGGGAAACCTCGGGTTGGTT
CTCGACTGTGCTTGGAAGACAAAAAAAGGAATCCGTTGGTACTTCTTATT
CTGCTTTAGAGTATATTCGCTTTAGAGTGTGCACTCCTATTTTCGTTGCC
TCACGGGAACCGCTTAAAGGGATTAGTCTTATTACACTGACGGTTTCCAT
ATGGTAGCAAACAAAGAGTGCTCGCTAAATACGAATGGACTAAGTTCATC
AAACTTGCAAGTTTTATTTGCAGATGATGTTTTCTACAGTACTTTCTTTT
CCATCGACAGGGTCACGAGGAGATACAAAGTCAGATCTTCCATCGACTCT
CCAACAATTTCGTATCTCTTTTTCTGGATGTTGCCATGAACGATAAAGAC
CATTTCTTCAAGGTATATTTTGTCTTTGTTAATCAACTTTTCGAGGTGAT
CAGATACAGGTCTGGCGCACGtcttttatgttgtttttttttcgatcgTT
TGTTTGTCTGCCTGCTATGAGAAGGTTAGTCGGGCAAAAATTTTCATCgg
ataatattttttttatttttcgtcaaaatacTTTTCCCCCTACCAGTTTT
TTCGACATGCAAGTGACATGCCAATatgacggagtccgattttttaatta
taatctttttgctatttttcccaaTCTTGCTGTCCAAATACATTCAAAAT
GGTGGTGCCCAAAATTTAGTCTTTTCGGAACAGCCGATTGTCGAGGGGAA
ACGGTTATTCTTGATATACGGTATTAATAGTATTGATGGACAGGACTAAT
GCCGATATTTCTACATAATAATAAATACATCACATGAAACATTGGCTGTG
CTTTGATCAAACATTCTGGGGATTAATCTTAGTGTTTCTCTTTTTGTAGT
TCTTCGCAGACTGTTTGAGTCAAGCGTTGTACGCAGCATTTAGTAAAGCG
TTCCCTGCATCCATAAACAAATTCAATCATCAATTCCGAAGAAGAATTGT
TTCACTTGTTTACGAATGGGTCACAGGTAAATATATGGTATAACGTGTCG
ACTATCACTCACGTTCTTTTAGTTTTCTGGTTCGTAAAATACATAAAAGt
acgtttaattttttttctagtcCGTAAAATAACACTCTAAACGTCTTTTA
CATTCGCCAAAAGGAGACACTCATATTAATTTTGACCATGAGAAGACACG
AAGAAATTTTTTAGTATTGTAAGAATGAGGTCAATTCTAAAACCTGCTTA
ACCTTTCAAActacaaagatttgaaaattgtCCATAAATTGATACCCTCG
ACACCTGCTATACTATTTTCTTTTGATGGAATATCACTCTCAgtcttcaa
aattgaaataaacaCCCAATAtcctaatcttttttttgtttctccAGGAA
CACAACCTCACGTGGACGAAATATTACACCAGTGGGATTTAGAAAGTCTT
GACAATAGAAGTCAAAACAAAGAAGTCTTAGACGATCATGCATTGAAGAG
TAAGTTTGTATGATAttacttgttttttttgtaagaatacactttataag
aatgtccatgatgaaaataaccaaaaaaatagaatatggtaagaatatca
ccattctgaaatttagcaactgaacctaagaatgccattttataAGTATT
TTCACCTgtcaatataacaatagcgttcagtttgaggccgttgttgttat
tttctgcccgcgtagtttgattattcgcccgatattgtcatttgggcccg
acgcgaagcggagggcgcaaatggcactagagggctaataatcaaactgc
aagggcagaattaatgagaacaacgaacgaaaacttaacgcttttactat
tattattcatatcggacattcaaacaacgtttttttctagtGTCAAtcaa
gtcttttcgcttcaatgcagcaatctcttcaacaaatttttagcaccttg
cgagcgggccgcaaatgaccaaaagtgtttttttcNCCATATCGGgcatt
caaacaacgtttttttctaacttcagccaagtcttttcgcttcaatacAA
TGTCTTCAACAAGTTTAGCACCTTGCGAGCGGGCaacaaatgaccaaaaa
gtgtttttttctgacgttagtttagtctcttcgcttcaatgcaacgactt
caatccaaTTCTGAGCGGGCTGCAAATGACATTATTGCCCTATAACCCGG
Tggggttaatgatatttcagccctctgaagcctggcgctttagtttcctc
agcgcgggtatgacaatttgagtcacaaaacctttcaataccgcccgccg
attgaaactttaatggcttacttaatgaccgctatatggataataattgC
CAATAATACCCCAGTAACGCTCAATATTCTCCAGGCGTCTATTACATGTT
AAATCTAGGTTttgatcttaacctaagaataccgtaaaaatattttagga
tgattttcgccagaaagataagaatatccatgatgaaattaaaaaacacc
attcttataaaaaaagcatgtattaCTCTTAGCCTGGAGATCAATGCTAT
GGTTTTTTTATATACTGGCGGTGAAATATATTGGACGATGAAAAGGATCT
GAGGCCGTCTATTTATATGGTGTtgttttttgtatatttcttaaaaatct
agCTGCTTGTATAAGTTGTTGTTTGTGATGTTGTTAGTTGATGTTGTGTT
GCTTCCAATGATAAACCAATAGGCGCGGTAAGCGTTTTTACGGCAGGGAA
CTGCCACTGTCAACCTCGTGTGTTGTCTTTCTGATGGTGTTTTTGCAACT
GGTGTTCTTTCTTTGAAAAGTCGATTTGGCGGAGAAATAAATAGCATGGT
TTGGGCTGTATTTTGAATTTCCAAGCTCCAACAAACGAAAgctgaaaaca
cagccaatcaaatgttgTTATTATTTCACTGGTCATACTTGCTTAGAAAA
AAcgcaactttttttaaaaatcgtttTAACTTTAGTTAGTGAGTACAGCA
CTAAATTCGAATTCCCTTTTGTAAAACTTTTAAGGCGAAATTTGCCCCCA
AACACGTATTGTaaacaatttataaaaatacaggacgggtctaTATTACT
CTACACTACAATTCACTGGACTGTCTCCGGGACTGTCTCAAATACTTCCG
ATGACTAACATGCTTAAGATCTTACTCAAGCAACGAGAAAAGCACACCAA
GCTCTAAAAAACAGAATAAAATCCTTAAGGCTTaaggacacgagaagttt
tttcacgttggtgcaatgcaccatgctctatcccaccaacctgaaacggt
ttctcgtgtctccacccataaaagtgaaatcgacaacacttttaacaaca
tttttgtgtctctcacttttgtccctgggacaaaatcagcgtgtcttttg
ggtattttcctCACTTTTTGTCTCATGATACACTTTATATTAGGTGAGGC
ATGGAAAGTCAGTCAGCTCTCGATTAGAGGAACCTTAAACCGAATCGTAC
CTTATGACATTTCTGTCATAACCAAAaatagcatcaaattttaacaaaaa
ggtTACATGTGTTTTTAGTTTTATGTGGTGAACTTTTTGTTAGATACAAC
GGATAACGGATAagaactacacgctttttttgtaagaatggtgtaaatcc
atttcatcgtggatattcttacagtattttgggaaaatcagcctaaaatg
ttcttacaacattcttaagttagaatcctaattcagactagatttaacat
ttagtacatacctctcaagcataaaatggcatttttgtgaaaggagtgag
ccttacttgggggtaattggcgaCTAATAATagaaaatgttctaaaaatg
gcattcttagcttgagtagcaaaattccatgatggtgatattcttagcat
tattcttaattttttggccattttcatcatggacattcttataaagtata
ttcttataaaaaagtgcatGTTACAGACTTTCGAGGCGAGAGCgaatttt
ttaaatgtagaGGAGATGATTAATTTTCTTCCTGAATGGATTACAGAGAG
TTGTAGAGTTTACAAGATCTTAAATTATAGGCATCTATACTGtgctgtat
tcatgatatgcaccattgcaatgcttttttggacctacctccgggtgccc
cggtggacgtcctataaattaaacccatgtccgttcgttcgttcgtccgt
ccgtctgttaccagcttttctcaggattggctcattagttttttttgatt
tttggcacaatgatgcaaaatggtaatgcccaaaatgtgacgagcccgtt
tttcgaaaaaaaattcatttccggccgaaaatgccggaaatatgccggaa
aaaccggttttttggcattttctcaagatttcatcattagttttttctga
ttttttgcaaaaagatgcgtattagcaatgcctaaaacttggtcgagtcc
aatttttgagaaaaaatcttttccggtcgaaaatgccggaaatatgaatt
ttttgcgttatgcattttcgctaaacgctatattttatgactgatttttt
ttcatttttctcctcgcattgctatctaactttcatcatcaggtaggtcc
attcagcatctagcttgtttgcTACTAAAGCTACACTTTGATGTATTGTC
AAAACTTTAGACTTGTCTTGGGAATTTTTCTGATTATGTGATTATGCTGT
TGAAGGTCGCTTTAATGACATTTAAATTGTTGAaaggtttcttataaaag
atatCATCcttatcatttaaaaaaaaacctaattGCATTCTCTAATGTAT
TATAAAACCAATAGCATCTATGGCAATCGATTCTTTATACAGTTTGTCAT
TTTATCGTTCGCCATAATAAGCTatgatttagattttttccaTCTCGTGT
TAATCCAAGTCTCCCAAGTTGACATGTGGTAAAAATAGATAGATGTGTTA
AAAAACTTTATACGTATATGTCGTTTTGTTGGCGATCACACTGGCAAAGA
ATTCAAGAAAATGCATTTGATGATATGCAATACGTTCTCTAGATTGAAAA
ATCCAATACCAATTTACACATTATTTATGTAGATTATAGCTTTGAAACGT
TGCTTATTATTTGGATAAAGTTTATTATTACTTGAACTAATTAATACGAA
AGGTTCCAGTTGCTGAAAAAGAATGATCGGAATCAGATATTTGGTACAGA
CCGTTGTATTGTTTGTAACATGCTTTTGTTTAGAATCAACAAACCATCAT
TCCATTTTCTCTAATCTATCATGCACTGAATCCAAATCTATAATCATATT
CCCAGATATCAATAGACGTGAATCAAAGAAATTCTATCCTAAACTCTTCA
GATTTCTTGTCAGAGAACTTTTACCAATGAACCCATCACTATCTGAAAGT
TGCATCAAACTCTTCATGTATTCACCACTTAAAAGACAATTACTGCATAT
GAATCAATCTTATATTCATCAATACATAAATGCGGATTTTGATTCTGAAA
CTAATTTGTATGGCAAACGCATGTGGCGAAGTGAACTTCTTCATATACTA
TACGGTTTACCAGTACCTTCAAGATCGACACTGCTTTACATTGATGACCG
AAGTGATTTGACTTATCATCCAACGCTGACGGATCAACTTCTTGCGTTCG
AACGTTCTAAAAAACTAGACTTGGTGTTTCTATGTCGTGGCCGTACATAC
ATGTGTGCAAGGCATAGAAATCGTTTACCAAGACATAGATTTATTTACAG
TGGTTACAACCCAGTAGATAGATCATTAGACTATAACATCAATAAAGAGA
TCCTTGATGTCATAAAGAACCCTGATTATGATCGATATGCAATTTACGAA
GACTATAAGAACTGCTCTAAACCTATGGACCTTTATTTCTGGATCGGTGA
TAATTATGGTGAATGGCAAGAGGGTTTATACAGATATCGTGACTTACTTT
TCAGATTAATCGACTTCACTCAGAATGAGTTCTCCAAAGCTAATGTGTCC
ATGATTTCCAATGACTATTATAATCGCGAAAACTGGTCTCTTCTCTCAGG
GCCATTATTGTCTATAAAGAAAAAGATTACTTTTGACCAACTTTTGACTT
CCATGAACGATTCAGCTAGATGTGTCGTACGAATCGATGTAGAAAGTCCG
ATTAAGTTAATCTTCATCGATAAATATAATCCCATTAAAACGGGAAACCC
ATTGAAAGTGATGGTCGTGAACTTGGATACGGTTTTGATCAGCTCTAAAT
ATCCTGACATTGTACGCGATTCTCCTGTGCTTAAGAGAGATGGTGTGGTA
TGGATTTCAGAGGACGATTTGGATAGTCCAGTTTTTCTGGATTTGtttgt
tcaaaaaatatatcaaattgtATGTTAATGGTGATTAGACTGTTATAATT
TTATGTATATGCTAAAAATTAGGTAAAAGAAAgtgttgaatgaaaaataa
atttgaaaatgaaacaaagtgAACTAATACTTTAAAAATTAGGCGCAGTA
GTGAAGTAGTATCAGTCTTGGCTGCCGTCCAGGTGGTCAGGGTTCGATTC
GCACCCAGTGCTGTGATTcccttggcaagtgaatgtacttTCGCCCGGGc
aaacccataccatgtgaggggaattgggtataCAGAAACTCAAGATAAGC
CTGTCGGTGGCTGTGTTAGGTATCGATTCCGCAATACATCGTGGATGAGG
TGAAAGTGCGCTGGCCTTGTTCCTAGTTGCTCAAGCCAGATTAACGCACT
TTATCCAAAAACAGTGTGTCAGTGGCTCACAAGCTGGCAGGCAGTATAAT
CTACAGCGACGGTTCTAACAAGACGACTCCTAGACCGCTCAATACAGAAC
TGGCCATCCTCTGTAAGGAGAAGCCAGTCATCATCATGGTAAAAATGTCT
TAAATAGTAAACAATTTTACATGTGAAACCTGgtcatttgaaattttttc
tataTTTGAGAGAGAGCATATGTTATTAAGAGCAATGAGCTCTAACTAAA
CTACGCATAACCATTGTGATTTTGTTGCCCTTTGTAAGTAGACTGCGCGC
ATTGCCAggattgattttgatataggggatgcgtatcgtgtatgaaattc
ccGTCCGAAGGTTACCCCAAAAATTACCCGAAATTTGGGGTTACCAAAAG
TTGCATGAATTGCCTATTTTCGtcacatccaatcaaagaaagaaaaaaat
gaagtgtTTTCATAACTATGAATCTTCATTCATTGAACAcattgaacaaa
gaaaaaaatatgtcgtTGTATTGCTAGGGGTGGGGAGTTAGGACAGAAAT
ATTGCAGACGGTGATACGCAGCCCTTCTCTATATTAAAACATATCGGAGG
GATGTGTGCAGTCTGTTTGCAAGTGGAATTTCTTCTAACTTTTTCAGCTT
CCTTCTCATTTGATGAAAATACACTGATCTTGCCTAACGAGGCTTCACCA
CCTTCAACCAATAAGAATCATCATGCAGAAGATGATGTCATGTTTGGAAC
CAAGAAACCCAACAAGAAAATTAAAGAGGTATGGGGATGCAGTTTATTTC
TCATAGTGCTTCCCCTGTAAAGTAGTTTTACCTAAGGAGTGGAGTTAGGG
TAAATGAAATTTCTTTCACGAACTAACCGTAATTTTTTGAACAGTTCATA
GCGAAAACCGTTTAAATCTTCTTCTTACCGTGGGATTACCCAACAgtgaa
tatttttcatttattcttctgtttttttttctggatatTTGTATTACATA
GAatcaagtgaatgtaccttaaCATATGCCATGTTAGGGGAATTTGGTAC
CATCACTAAGATTCAAGCATATTGGGAGATATGATTGGCTTGTGATGTGC
CCTAACTCTCATGAGACTCGGTCTCGCATGGGCTCCGCTGTGCCACTGTC
GTTTAAGTGTCCACCACCTTCGAAATTATTTAAATTCAGGAAAATCTTAA
CCCTATATGAAGCAGAAATCTACATTTCGTACATCGAAAGAATgtgtttg
tttaaaaaaattatttttataaataagttgatatcgtttgcttgctAATC
AATcttaatttacaagttttttcacattgaattgacacggttGTGAAGCA
AGATTGGTTCGAAAGAagggaaaaaaacattttttttagagATACCGGCC
TATATTAGACATGTGTctggtatgaaacgggaacactcgTGTAAAGCCAT
TAAAACTCATGTTTggtgttttttctttcattttagtcACATCCATCAGG
TGAAGGGCCTCAGTTCGAGAAAATTGCGTTCGATATTCATGGTCGTTCAC
CTTTCATTATGCATTACCTCGCCTCTAAGGAACTACAAGCTGAAGAAGAA
TCTTTAAGGAAAATTGTGACCCGGACGCAGATGGTACCTAAAGAAGATCT
GTATCCTTTTCAAAATACCAAGAACTCCGAGAAACGCAAAAAAGACTGGG
CGATATACCACGGAAACGGCCCTCGCAACGACCCCGTTGCTGGTCCTTCT
CTTTTAAACTTTTCTTGAAAACACTATCTTAAacgcgaaaaaaggactgg
ggcGATATGCCAAGCTCTACTTTACATTATAGCGAAAACAATGGAAACGG
CCCGCGCAACGATCCAGTTGTTATTCCTTCTCTTTTAAACCTTTCTTGAA
AACACtaccttatcggtagaaaattTTGTAGCTTAAAAATTTCTTCAGCA
AAAGATTTATTTAAATCATAATTAAATTATCTGCAAATTCATTTCCAATA
CCACACTGGAAGTTTTTCACTCAAAGATATTTAAAGTTTCACCAATATTC
CGATATAAATATTTCTAATAATTATATCCAAGTGGATTTAAtggaacaat
ttttttaatagaGATCAGACGGACATACAGTTGTAGCGTATTTTTTTCAT
AGGGgtaatttcaattcaattttcaattgacTGGGGAGATAGCGGGGTCT
CTGCAGTCTGTGACACTGGGTCTTATCTATCGTACATTTGCTAatctgag
atcagattgtgaatgttttctgcccaccacgctaaagctctaaagggttG
GTTGAAAAGAAACAATCTGACGAAAATGCTATCTCGAATTCTTAAGGACC
GTAAAATTAACTCCTGAATTCAAATTATCTCCTAACGATGTTTAAATGTT
AtcatgtttttttaaagaaatttgtctCTTTTTTTAGTCTGTTTAAGTAA
ATTCAGGAATCGTTACGTTGAAGCCCTCTAACGGTTATCTGTGTGATCCT
TAACCTTACATATCTCTGTATTAAACCACCAGTTCTCGACAGAATGAAAC
ATATCGATCGATTATTGACAAGCAGAAGAAAGCATCTAACGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011385XLOC_011385Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020281-exon-sc0000351-1491911889:72998..73255TCONS_00020281-exon-sc0000351-1491911889:72998..73255Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:72998..73255TCONS_00020281-exon-sc0000351-1510915933:72998..73255Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:72998..73255TCONS_00020281-exon-sc0000351-1575043694:72998..73255Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:73946..74098TCONS_00020281-exon-sc0000351-1491911889:73946..74098Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:73946..74098TCONS_00020281-exon-sc0000351-1510915933:73946..74098Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:73946..74098TCONS_00020281-exon-sc0000351-1575043694:73946..74098Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:74512..74555TCONS_00020281-exon-sc0000351-1491911889:74512..74555Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:74512..74555TCONS_00020281-exon-sc0000351-1510915933:74512..74555Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:74512..74555TCONS_00020281-exon-sc0000351-1575043694:74512..74555Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:75161..75199TCONS_00020281-exon-sc0000351-1491911889:75161..75199Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:75161..75199TCONS_00020281-exon-sc0000351-1510915933:75161..75199Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:75161..75199TCONS_00020281-exon-sc0000351-1575043694:75161..75199Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:79059..79163TCONS_00020281-exon-sc0000351-1491911889:79059..79163Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:79059..79163TCONS_00020281-exon-sc0000351-1510915933:79059..79163Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:79059..79163TCONS_00020281-exon-sc0000351-1575043694:79059..79163Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:80695..80757TCONS_00020281-exon-sc0000351-1491911889:80695..80757Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:80695..80757TCONS_00020281-exon-sc0000351-1510915933:80695..80757Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:80695..80757TCONS_00020281-exon-sc0000351-1575043694:80695..80757Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:81469..81510TCONS_00020281-exon-sc0000351-1491911889:81469..81510Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:81469..81510TCONS_00020281-exon-sc0000351-1510915933:81469..81510Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:81469..81510TCONS_00020281-exon-sc0000351-1575043694:81469..81510Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:82547..82673TCONS_00020281-exon-sc0000351-1491911889:82547..82673Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:82547..82673TCONS_00020281-exon-sc0000351-1510915933:82547..82673Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:82547..82673TCONS_00020281-exon-sc0000351-1575043694:82547..82673Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:83045..83146TCONS_00020281-exon-sc0000351-1491911889:83045..83146Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:83045..83146TCONS_00020281-exon-sc0000351-1510915933:83045..83146Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:83045..83146TCONS_00020281-exon-sc0000351-1575043694:83045..83146Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:89045..89175TCONS_00020281-exon-sc0000351-1491911889:89045..89175Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:89045..89175TCONS_00020281-exon-sc0000351-1510915933:89045..89175Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:89045..89175TCONS_00020281-exon-sc0000351-1575043694:89045..89175Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:89884..90047TCONS_00020281-exon-sc0000351-1491911889:89884..90047Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:89884..90047TCONS_00020281-exon-sc0000351-1510915933:89884..90047Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:89884..90047TCONS_00020281-exon-sc0000351-1575043694:89884..90047Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1491911889:90930..90991TCONS_00020281-exon-sc0000351-1491911889:90930..90991Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1510915933:90930..90991TCONS_00020281-exon-sc0000351-1510915933:90930..90991Clytia hemisphaericaexon
TCONS_00020281-exon-sc0000351-1575043694:90930..90991TCONS_00020281-exon-sc0000351-1575043694:90930..90991Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000351supercontigsc0000351:72998..90991 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.24325	0.844633	0.939647	1.63164e-05	0.76332	1.23013	0.00055063	2.90915	0.801531	1.94697	0.0145007	0.489038	0.833802	0.030729	0.510456	0.0122018	0	0.446522	0.00485372	1.01797	0	1.33793	3.39853e-09	0	0	1.74402
Blast
[Close]
BLAST of TCONS_00020281 vs. Swiss-Prot (Human)
Match: F227B (Protein FAM227B OS=Homo sapiens GN=FAM227B PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 6.791e-26
Identity = 82/307 (26.71%), Postives = 138/307 (44.95%), Query Frame = 3 
Query:  483 RNIETVAYPGFYYHENTPLPGALEAPHLMNHVTSLQEFSNGFRKMWRKYFLSESSVAIMQDAFWWIFL-QFKGE-------------------------------EFFADCLSQALYAAFSKAFPASINKFNHQFRRRIVSLVYEWVTGTQPHVDEILHQWDLESLDNRSQN----------KEVLDDHALKTSFSFDENTLILPNEASPPSTNKNHHAEDDVMFGTKKPNKKIKESHPSGEGPQFEKIAFDIHGRSPFIMHYLASKELQAEEESLRKIVTRTQMVPKEDLSRQNETYRSIIDKQKK 1277
            +NIE  ++ GF  +E T LP  L+A  +   +     F     K+W+ +FLSE+S+A++ D+FWW FL +F+ +                               + + DCL+QA+YA F +AFP S   FN +F+  + + ++ W +G +P     +H W L+ L   + +          KE + D     S S D N + + N     +   +          TK        SH S  GP+F ++ F+  G+SP I++YL   EL    ++ +K   +   + +E L     TYR +I + K+
Sbjct:  144 KNIEGCSFTGFKANELTQLPRHLDAEQIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFWWWFLHKFRPDRENQDCLFDRISESYVTLFMSIPLSRKDAFFQIYPDCLAQAIYATFHEAFPESSYLFNDEFKEDLGNNIFLWCSGLKPQKGFWIH-WKLKELSTTTIHGSKKAPAKSVKERIADSQEHISTSIDFNIIKILNNPRAYTLPISKEESRLSRLATK--------SHYSSTGPEFNRVLFNFGGQSPLILYYLKMHELAGISKAPKKTKIKLTKIFQEPLP--APTYRDVIKEAKR 439
The following BLAST results are available for this feature:
BLAST of TCONS_00020281 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F227B6.791e-2626.71Protein FAM227B OS=Homo sapiens GN=FAM227B PE=2 SV... [more]
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