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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020269 ID=TCONS_00020269|Name=TCONS_00020269|organism=Clytia hemisphaerica|type=transcript|length=692bp TCAACGCCCAAGTCTCATCCACAAAAGCCGCTGGCTTCCGTTCAAGCgct caaaaatcaaagaaaggCTTTGTATCTTTCCAAGATTACGAGGATACGCC TGTCAATCTCTCACTAACTCAGAAAGCTCAGAAAGATGACCTTTCTACCG GACCCAAAAACGCCTTAGGATCAAACATGAAGGTCCATGCACCAGGACCT GTAAACGCACGcctgatgaaaatgatcacaaACCCAAAACTAAGACAAAC GTCAACTGAAAAAGAAATGTCAATCAAGAAAGCTCCATCCCTGACATCAG CTAATCGTCCAAAAATCTCACGAGTCGTTTCACAGGAGCGAGTTTCATCT CCAGTTCACTTAAACGCATTCGATGAAACAGACACAAAAACAGTTCCATC ATTATTGAAAGTAACTCCTGTTCAAAAGCGATTTCCAATTGCCATGACAA TGAAAGAAGCGATTCACAAAGCAGAGGAGGCGAGAAAGGAACGAAAACAA AGAGAGAAAGAGGAAAATGAAGAATACTGCAAAGAGTTCGATAAAGATTG GAATGACTTTTACTCCGTTGATGATAAACACGACAAAATCGAAAGTCCTT CTTCAGGCTATACTGAATATGAATTTTAAactcatttaaaaaattttcta ctAAAATACTTAAAAACTAATCGAAATATTTTAACTCCTAAC Run BLAST on NCBI protein sequence of TCONS_00020269-protein >TCONS_00020269-protein ID=TCONS_00020269-protein|Name=TCONS_00020269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
NAQVSSTKAAGFRSSAQKSKKGFVSFQDYEDTPVNLSLTQKAQKDDLSTG PKNALGSNMKVHAPGPVNARLMKMITNPKLRQTSTEKEMSIKKAPSLTSA NRPKISRVVSQERVSSPVHLNAFDETDTKTVPSLLKVTPVQKRFPIAMTM KEAIHKAEEARKERKQREKEENEEYCKEFDKDWNDFYSVDDKHDKIESPS SGYTEYEF Run BLAST on NCBI transcript from alignment at sc0000350:338180..338871 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020269 ID=TCONS_00020269|Name=TCONS_00020269|organism=Clytia hemisphaerica|type=transcript|length=692bp|location=Sequence derived from alignment at sc0000350:338180..338871 (Clytia hemisphaerica) GTTAGGAGTTAAAATATTTCGATTAGTTTTTAAGTATTTTagtagaaaat
tttttaaatgagtTTAAAATTCATATTCAGTATAGCCTGAAGAAGGACTT
TCGATTTTGTCGTGTTTATCATCAACGGAGTAAAAGTCATTCCAATCTTT
ATCGAACTCTTTGCAGTATTCTTCATTTTCCTCTTTCTCTCTTTGTTTTC
GTTCCTTTCTCGCCTCCTCTGCTTTGTGAATCGCTTCTTTCATTGTCATG
GCAATTGGAAATCGCTTTTGAACAGGAGTTACTTTCAATAATGATGGAAC
TGTTTTTGTGTCTGTTTCATCGAATGCGTTTAAGTGAACTGGAGATGAAA
CTCGCTCCTGTGAAACGACTCGTGAGATTTTTGGACGATTAGCTGATGTC
AGGGATGGAGCTTTCTTGATTGACATTTCTTTTTCAGTTGACGTTTGTCT
TAGTTTTGGGTttgtgatcattttcatcaggCGTGCGTTTACAGGTCCTG
GTGCATGGACCTTCATGTTTGATCCTAAGGCGTTTTTGGGTCCGGTAGAA
AGGTCATCTTTCTGAGCTTTCTGAGTTAGTGAGAGATTGACAGGCGTATC
CTCGTAATCTTGGAAAGATACAAAGcctttctttgatttttgagcGCTTG
AACGGAAGCCAGCGGCTTTTGTGGATGAGACTTGGGCGTTGA Coding sequence (CDS) from alignment at sc0000350:338180..338871 >TCONS_00020269 ID=TCONS_00020269|Name=TCONS_00020269|organism=Clytia hemisphaerica|type=CDS|length=627bp|location=Sequence derived from alignment at sc0000350:338180..338871 (Clytia hemisphaerica) TTAAAATTCATATTCAGTATAGCCTGAAGAAGGACTTTCGATTTTGTCGT GTTTATCATCAACGGAGTAAAAGTCATTCCAATCTTTATCGAACTCTTTG CAGTATTCTTCATTTTCCTCTTTCTCTCTTTGTTTTCGTTCCTTTCTCGC CTCCTCTGCTTTGTGAATCGCTTCTTTCATTGTCATGGCAATTGGAAATC GCTTTTGAACAGGAGTTACTTTCAATAATGATGGAACTGTTTTTGTGTCT GTTTCATCGAATGCGTTTAAGTGAACTGGAGATGAAACTCGCTCCTGTGA AACGACTCGTGAGATTTTTGGACGATTAGCTGATGTCAGGGATGGAGCTT TCTTGATTGACATTTCTTTTTCAGTTGACGTTTGTCTTAGTTTTGGGTtt gtgatcattttcatcaggCGTGCGTTTACAGGTCCTGGTGCATGGACCTT CATGTTTGATCCTAAGGCGTTTTTGGGTCCGGTAGAAAGGTCATCTTTCT GAGCTTTCTGAGTTAGTGAGAGATTGACAGGCGTATCCTCGTAATCTTGG AAAGATACAAAGcctttctttgatttttgagcGCTTGAACGGAAGCCAGC GGCTTTTGTGGATGAGACTTGGGCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00020269-exon-sc0000350-1491911889:338180..338871 | TCONS_00020269-exon-sc0000350-1491911889:338180..338871 | Clytia hemisphaerica | exon |
TCONS_00020269-exon-sc0000350-1510915933:338180..338871 | TCONS_00020269-exon-sc0000350-1510915933:338180..338871 | Clytia hemisphaerica | exon |
TCONS_00020269-exon-sc0000350-1575043694:338180..338871 | TCONS_00020269-exon-sc0000350-1575043694:338180..338871 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000350 | supercontig | sc0000350:338180..338871 . |
Blast
The following BLAST results are available for this feature:
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