TCONS_00020226 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020226
Unique NameTCONS_00020226
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3582

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020226 ID=TCONS_00020226|Name=TCONS_00020226|organism=Clytia hemisphaerica|type=transcript|length=3582bp
AGCGTAGAGTCAACATCTAGAGTCATTTAAGGATTTCACATACAAAAATT
GCATGGATTAAGTGTGTAAGTTCCATAGCTGAAGTGATTGAAGACCCGGT
CAAGCCGACCTTGATTCAACAAGAACTTGAATGCTTGAACGAAGAAATCA
TCAAGAATCTGTTAGACGAACAAGATGACATCCTCTTAAAATCCTCATCC
TCGTCAACAAACTCTACCGCTTCGCTTGGTGTACCTTCTGCATCGACGGC
GTCATCGCAGCGATCGCTGAATGATACGCCAACGTACGGCAGTTCTGACG
GTGAAGCATTTACCGGCACTTTCTACAACGGCTCCATGATTTATTCACCC
GCACAAACGATCGAGGGGTCAGTTTCCCCGCCATCCAACCGACGTTTCCC
GCCCATGATGGAAGCGTTAAAACTTACAGATCGATTTGACGCCCCACACA
CGCCACTCACTAACGGGCACACTTTACCGCGCAGCCACAGGCGGACACGA
ACCACATCGAGCGGCAGTTCAATAAGCGATGATGGTGCACTTTCGTCGCC
TACTTCACCTTTCGGTCGCGGCACTTTCGGCAGACGATTCAGAAGCACTG
GAAGTAGTACGTCCTCGATCTCCTCGACGAGCGACTTATTTCAAGAAGTG
TTGAGATACCCGGCCGTGAAATTCGATAAAGACACGGTTGACTTGTGGTA
TCGACCAAATATCACACGAGATGAAGCAACAAGCTTACTTCGAGACGCAG
AGCCAGGAAGTTTCTTGGTACGAGATAGTCAAACCTATGATGGAGCTTTC
GGATTAGCTGTGAAAGTGGATTCGCCACCTGCCAGTGTCCTGAAACAAGT
CGATGGAGATGTTTCGAAAATCGATTTAGAGAACGAACTGATACGTCACT
TTCTTATCGAACCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAGCAACGAA
GAACCAACTTTCCCTAGCCTAGTTGCCCTCATCTATCAACATTCCATCAC
TAAGATGGCCCTCCCAATCACTCTTCTTATACCTTACAAAGACTCAGTTG
ACGGTGGCAACCCTGCAGACAACCGACTGTCAAAACTCAGCGAAACACAA
TTACTGGTCAAAGGAGCAGCATGTGATTTATTATACCTGGGCGGTGTGAA
GGTGGACAAGCTAACGGGTGATGGAGCTGTCCAGTACGCCATGAACAAGG
TGGCATCACTTTCCACCCAATTAAAGACTACAATCGTTAACATCAAAGTC
AACCAAGATGGTATCACCCTCACCGATAACAATCGAAGGATGTTTTTCCG
GCAACATTTCCAGATGGCGAATGTCCTACATTGTGGAGTGGATCCAAAAT
CACGACAAGTTAATTTGAAGACATTCGCGAATCGTGAAGACAAAGATGTC
GGTTGTTTCGGCTTTGTGGTAGAGAATGAAAGGAAGACAGAACATCAATG
TTACATGTTCGCTGAACTGGAGCAAGATCAACCAGCTTCGGCCGTCATCA
ATTTCATACATAAAGCCATGCGGTACGCTCGTGTATAAACTTTAATGGTG
GTGTTGGATTATGTTTCAGTTGAGAAGCAAACGTAATGGAGAAAAATGGT
TCCTATTCCACATGAGTAGCGTTCGATACGTAGTTTGGCTCAACGGTAGA
AGAGCACGCGTTCTCAGACCAGATGTAGAATTCGGGAAACCTATATAATA
CAATCATGTTAGaactgtaaaataaaaaaaaatcatctaaCGAAAAACAA
ATCTGCTGTGGTAACAAAATAAGCATAAGCTAAACAAAGACATATAAAAG
CAAATTTAATTTCGAAGACAAAAGATGGAAGATGTTTTATTGGTAAAAta
cagactggtctgtaaattatatttatacactttttttatttacttactGT
CATGGTTTCGGTGACAGCATGCAGGGATTTCCCGAGCTGTTAATTAAAAT
ATACATTTAATTGTAAGCATTTTACTGTACAAAAAATTATTCACTCTCAG
AGGGTCAACGATATAGGTTGGTTCAAcgctcaaaattttcaaagacaacc
TTTCAGAACATTTTGCTACTCAGTACTCAAATACTTGTTTTTTacaagca
taacgtttataagcatacgtaGGCTCACTATTTGGTACccaaacaatggc
tctattgaaCAATCGAATGCTAATCACATTGCGAGCCTGGTATAGGTGCA
GACACTTgctcataaaaaaacatgtaatatcGAATTCAAACTGGTGTCTC
TAagagaaaaagtaaatttttgttttgaagaattttcataCTGTTGGCTT
CTTGGCTACAATACATGGGAACTTGATTTGATTAAATAAAAAGCAATTTG
TTATACTTTGTAATATTATCGcgaaatatatttgaaaatattccaaTGTT
TTTTCTACGTTTTCTAAGATATATAGTTTTACAATATTCCTTCTTTgtta
tttaaaaagataaacacCCTTTATTATGTAAATAGATCTTATcttaaaaa
atctataaaattaaCATCTTCTGACTTTATATCCTAAACCTCGAATAAAA
GGTTGCTTTCTGATGCAGATCAATATGATAATTCTAATTCGCAATGATGG
ACTNATGATCTGGTCGAATGTCTTCTGACTTTACATCCTCAACCTCGAAT
AAAATGTTGCTTTCTGATGCAGATCAATATGATAATTCTAATTCGCAATG
ATGGACTTATTGGTATACTTAAAAAGAgctaaaaacagtaaaaaaggcct
ttaaaaaatgtacaaaatctAATCAGAGgataattatcaaaataaataat
ttttcaagttCTATAATAAGATATTTTAGGTGTGACTCGTCTACATCTTG
AATTGAGTTTCATCTATAAGAAGTATGTAAAAAACATTGTTGAATCTCAT
AACTTGGCACTGCTTGGCAATGTACCCATTTAATAGCATATAGTCATGCA
CAAcgttaaaaggaaaaaaatcccaaaaacaCAGCAAGCAGCAaactcaa
attttaaagcttttatcACCTTTCTCCAGCCTACATAAAAAAGCATGCAG
GAAGGAGCCTTGTCAAATCGCAAAAATTTTCTGTATGTTTTGTACGCCAT
cactcaaaattttttaaactcttATATTAGGCCTTCTTTCAACATTTAAA
ATCTTACATTTTGATGGAAAATGCCTTTTTTCTCTGTGAGCTGTATCGTC
TGGTTTAAAAGCTGTTAAGCGATCAGTTTTATTTTCTGCCAAGTCTGATT
TGAAAACCTTACTATCAAATGCATTCTTGCAATGTTTTCGTTCAGCCCGA
GTCCAATCTTGACTTGCAATTCTTTCGACAGTGCACCAAGATTCCTTGTC
CATATCTATTTCCTATTCTAAATGTCTGCAaaataagaagataaaaaatt
tcccTTTCAATCACAATACATATATGAACAAGAGATATATTTACTATGTT
TAAAGATTCTACTTAAATCTAGAAAANTTACATATATGAACAGAGATATA
TTTACTATGTTTAAAGATTCTACTTAAATCTAGAAAAGAGCAGTCAACTT
TTCTTTCGACTTTTCAACAGTCTGAtactttg
Run BLAST on NCBI

transcript from alignment at sc0000350:254040..265504-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020226 ID=TCONS_00020226|Name=TCONS_00020226|organism=Clytia hemisphaerica|type=transcript|length=11465bp|location=Sequence derived from alignment at sc0000350:254040..265504- (Clytia hemisphaerica)
AGCGTAGAGTCAACATCTAGAGTCATTTAAGGATTTCACATACAAAAATT
GCATGGATTAAGTGTGTAAGGTATTATTCATGTGTTTGTATGATGGGCGC
TATATAAGGTATAAATACCTTTTCCCTCTCCGTTCTCCTCGTGTAGAAAT
AGTTTATCCTTTGGATTCAAAATTGATTTTTGCTTTGATGGTAATGCTTC
TTACACTTCTAAAGGGAATAGAAAATTCTTGTTGTAAAAGTTGTAATGTG
AATTTTTTTACTGATATGTATATTCACCGACATGGTTAGATCAAGGTAAG
GAGTTTTCGGTGTAAAGCATACTTCTCTAAAAGGAAACCTTTTGAAATGT
CTCACGAAAACAACAGTCAAGTGTCATCTGATAGACCTTGGGTGTTCTCT
TAGATAAGATTGCTGTTCTGTGGCTGTATAGTCTGGTGGGACCTGCTGAA
CTTAAGATCGTTAACGAGCACTAAATAGTTTGACAAGTACCTGTCCTTTT
CGGTATTATGAATACGATGAACCTTGCATAAATGAACCTTATACGAAACA
AAAGTATATCCGGAAAATGCCATTTGATCCGGATTGCTTCAATTATCCGG
ACTTTCCGTATTTGAGAGAAATACAATTTATATATGGCTACTGTTGCGTG
TTATTTTTGGGATGTTTTAAAAATTGTTTTGATTACTTATAGAGGGAAAT
TAACTTGATGTTACAGAATTTGTTTTTACNCTAAAAATTGTTTTGATTAC
TTAAAGAGGGAAAGTTAACTTGATGCTACAGAATTTGCTTTTACTGTGTT
AACTTCGTGTTAATTTTCACTATAAAGATCTTCCTTCCTTTGAGAGACAA
GGCTTTATAGTCTCTATGTCACCACTGTGTTTTTCATTAGAACTTATTCT
TTCTATAAGCACTTTTTTAGAAAGTTGTAAAGAAGAAAAAGACTGGATCT
TGAGACACGGCTTTTGAAATATGTAGCCACTAATCTACAATATCTGGAGA
CTGGTTTTCTAAAATTTGTACTGAAGGAATCGTCGGGAGACTGAAAACGA
GAGTTGGACAATCAAGTGCATTTTGTGGTTGCGGGGATTGAATAAGTCAA
AGTGCTTATATAGAAATGCTAGCCAGTTGATTATTGAAGGTTGTCACCTC
AGTTTTTGTGTTGTACAGAGGACCGGTAATTCAACATCAGATGTCAACCA
ATGTTCTTATTTGATGTAAATTGAATGTTTATATTCGCGCCATTCAAAAC
GTATGAAACACTACAATCAGAACTTCATACAAAAAAATCTTTCAACTACT
TGTCAAAAACGTACAAATGTACTGATGAACTATGAGGATAGAAAGTACAT
GTCTTTCACGAAAACGAACTGATTGATTTGTGTTGATTTTATGTTTTTGC
GGGCTTTTTGTCCGTTTGTCATTTTTTCTTACCATTCATTTTGTGGTGAA
GGATTGCTTTTCCGTTGGCTGTCTATCGGTGACAACATTTCTATATTTAT
AATATTGCTGAGGAAAGGACTCGCGTGGACCACCAATTTTTACTCGTTCC
AATTTTTATTATTGTTGTTGATGAACCGAAGCTCGTAAGCGGAATCAAAG
AAGAGGCGTTATTAGAAAACAAAACAGTGATTTCATTAAAACGAAGATTA
AATGATAATTTAGTGAACCTTCCAACGGATGATTAGAGATTTATGTTGTT
TTGTTGTGGATATCAATCGTTCAAATTGAATCCTGTTTATTTAAGTTTTG
AAAAAGGATATTGTGTCATTTCTCATCTCTCTCTTACTCACTATTCATCC
GTCGTGTATTTTAGTACGAAATTCAGTGAACTTTTCATTGTCACTACACT
TCAAGTATAGATTTAACACGGAAAATACCTTTCTTGTGCACATTGAACAT
TTTTTGTTTGTGGAATCGAGTTTGAGGAGACTTTTGGCTTGTGTTGGACT
TTTGAAAAGATAAATTTTACTGCGTGACATTATTTCATGGTCGTAATACG
TTCAAGATGACGTTACTCGATCAACTCTGGGAAGTTCTCCAATCAAGGTG
CTCATTAATGGAGTTTAAACTATGAGTTTATGTCTGAGATTTGCGGAGAA
ATCCTCTGCCCATTACTCTGTAAAAGTTTGGAAAGGAATGTTGCGAGCAT
TTCCGAGAAATTCAGTTGATATCGCCAACGATTCTTTTTTTCTACGATTG
CCTTTGTCGTCGATTTTGGAAGATAATTTTTCAATCCTGAAAGGCTTCGT
AAGAGAGAAGCAACCGATTCGAATCTACTGGGATAGGAAAACCGGGATGT
CCTCGAGTTGTGAGACTGGCTCAAAAATCAGATTTAAAAAATGTTTAAGC
TTTCAGTGATGAAGAATATCTTCAATACCTTACGTAGTAATATTCGCTTT
TGTGCCCCTGTAATTAGTCTCCCGTTAAACCCTTGTTAACCCATTTCTGT
TTTATTTCGTACACAGTTCCATAGCTGAAGTGATTGAAGACCCGGTCAAG
CCGACCTTGATTCAACAAGAACTTGAATGCTTGAACGAAGAAATCATCAA
GAATCTGTTAGACGAACAAGATGACATCCTCTTAAAATCCTCATCCTCGT
CAACAAACTCTACCGCTTCGCTTGGTGTACCTTCTGCATCGACGGCGTCA
TCGCAGCGATCGCTGAATGATACGCCAACGTACGGCAGTTCTGACGGTGA
AGCATTTACCGGCACTTTCTACAACGGCTCCATGATGTAAGAATGCTTTC
ACTTTGTTTGTTTGTTACTCCTTGTAAAGAGTTACCCATTTCAAAGTGCC
TGCAATTCGTAAGGATTAATCAAAACTGCCTATAAGATAACGACTTCTTC
TAAAACATGATTTTTGTGTGCAACCAACAGTTTTGATTCCTCATGATTTA
TTGTGATCGTAGCATGAAATTTTAGATAGGCTATAATAGCTGTTTGTATG
CTTCCCATCGCCATAATCGAGCAAAAAAAGTGCATAGTTTGATATTTCAT
AAAAGTATTTGAAGCTTAGAATGTAGCTAGTGTAGACAAGAATCAGGGCT
TTCTTTGTGACGGTTTTTCTTGTATTGATATTTTGAAACTGTATAACTGG
TTTTCCAAGGTGATGAAATCCACCAATTTGACATTTGAAACTTATCTTGA
AAGTCATATTTTCGAAAGTTGATTTTCAATACGAATTAAAATATTTTGAA
AACTAGATATAAATTTATCGCTAAATTTAGAAATCACTCAGCAAGTTTTG
TTATAAAAATAACTTTTTTCATCGTTAAGATTTGCTTCATGTGTCAACTC
AATATATAAAGTCGACAAGATAAGATTCTTTCCACTATTAACATCACGTT
TTAAGTTTGGTGTGAAGTGATTAGATTTGGACGTGATTCTTACTCCTGGC
TCCTGTCATTATTGAATATACAGTAATCAATTTTTTGTTCTTCATTCCAA
GAAACGAAGTCAGCTTTACGTCACTCTATAATTACATTTATCGTAATTAT
TGAAATCAAAAACATTTCGGATATCTTTTGTTCCATCTTCATCTACTCAG
AAAGTAAAAAAGTTTCTCACAGAATTTATTGAAGGTAGATTTAATAGTGA
AAACACCTGTAAAGATGCCAGGTCTTTATAGAAATCAAAGAAAAGGCCAA
CACGGTTCTCTACAAGACAGGTAGTCATTGAGTTCTGAAATCAATTTTGA
CATACGCAAAATTTCTTAACGGTATCTTTTGGCTTACTAAACTAGATAAA
GTAACAGTAAGGGATGATGAATGAAAAGCTTTTGTGTGTAAATCAACTTA
TAAACTAACTAACTTGACTATTCAATTGGAATGTTTGGATGAATAAACGA
GTTAGCAGGAGATCGTTTTGATGTTATTTCCTCGTTCTCTTGTTCAAGTC
AATCTGAAAGAGAGCGGAAATTCTCCACATCGATTGGATTTGAATCTCAA
CTTTAAGAAATTTCTTTAATTGATTTAACGCTGTCTTTCACTTTGGCCCT
TGTTGAAAGACAATTCTGTAACGGCTTTTAGGTGATGTGTGTGTATGGTT
TTGTGTTTTTGAAGAGTTCTCGTTTAGCAGACGTTAGTTTAGCCTCTTTG
TCATTGTTGGAAAAGTGTTATGCGAGGGATGGTGTTTTCAGCTAATTTTG
ATAATTGAGATTGACGATATCTGTGTCGTTCGAGTTCCATGTATTTTGAT
TTGATTACTGTTACTTGGTATCCATGATTTGACTGCTGGTTCAACTACAT
TTAAGCCTTTAGAATCCAAAGAAAGTCTGATATTTTGAACAACAGTGTCA
CCGCTATAACTAAAATGTTAACGAAGTTTTTTCAAATGTTTTCTTTCAGT
TATTCACCCGCACAAACGATCGAGGGGTCAGTTTCCCCGCCATCCAACCG
ACGTTTCCCGCCCATGATGGAAGCGTTAAAACTTACAGATCGATTTGACG
CCCCACACACGCCACTCACTAACGGGCACACTTTACCGCGCAGCCACAGG
CGGACACGAACCACATCGAGCGGCAGTTCAATAAGCGATGATGGTGCACT
TTCGTCGCCTACTTCACCTTTCGGTCGCGGCACTTTCGGCAGACGATTCA
GAAGCACTGGAAGTAGTACGTCCTCGATCTCCTCGACGAGCGGTAAGTGT
AAAAAGAGTCTTATCTTTTCATATTTGGGTCAGATATAAACTAGTAGAAT
AATGGTGAAATACCCTTAGATTCTCCCATTATTTTTTCCACTTTTTAAAG
AAGGAGACAATTAATCGCTTTCCATATCATAATTTCACTGTTTATGTCAT
ACTTGTCGGCGAGTGTCGGTTTGATGACGTCATGCTTTTGATCAATTAGG
TCAGTCAATGTCGGTCGTTTTAATCTCATTGCGGGTGTATTCAAGACGTT
AATGAACGGGGCAAACTATAATGGATCGGGCACAAATCTTTAATGGGTTT
AAAAGGTGACTTAGGCTTAAACTCTAGCTGACGTTAGCTAATTGTTTAAG
GGCTGGATTGTTTTTGATCATTTGAGCTCTTTAAATTGATATGTTATCAA
ACGTCGTTCACTCTTCCATTGTTTGCTGTAAGCCTCACAAAACAACAACA
AAATGTATAGTCTAAAATTTTAAATTATGTTCATCTTCTCTCAATATGAT
TATATCCCATTAATTAAGAACCAAGTTATGTTACAAATTTTTGAAAGAAA
GCTTTCAGGGAAGTACAAGTTTACTTTTTATTACACTTTTTTTATATAAG
AACAATAAGGCTCAAAATCGCCAAAAAATAAGAACAACGCTGAGCCTGAA
ATTACTCAAATTCAAGTAATTTAGAGGTGAAAGTCGTAAAAATTGGGTAT
AACGCCTAGAATACCTCAATTACACCTTATAAATAAGAACAGGATAAGAA
CAATTTGAAGCTCAAAGTGCCAAAAGAATAAGAACAACAGAGCCTCAGAA
AAATTTTACTGATTCTTATAAAAAAAGTGTATGCAGTCAAAACGGTCTTT
ATCAGGAAGACAAAGATTTGAGTCGAAATCAACGACATAAAAACTTGTTA
TTTGCACTCAGACAAAGCTTGAGCTAATCCGGAAAAGGACTTAAATGCTT
TCAGTCTAGTATTTTCCCAGGCTAAATGATTAGTTAAGTCTCATTAAGAA
GTCTCTTAAACTTTCAAATGTTTGTATGAGCTTAGGGAGGAGTTTTTGGT
CATCTTTTTCTGAAAATTATTGTCTTGTTTGGAAAAGTCATTTCTTGTCT
TATTTCCTTGTTACAAATCCAATATGTTGTCTCTTTTGTGTCACTTTGTT
AGGTGTCAATATTAGAAGTTCAGCTTGTTCCCTTAATTTCCTGATTTCAT
CAACCTAAATAAACTTTAGGCCTTGAGATTAAACGTTTGACCAGAATTTA
GCTTGATATGACGGGAGAAGCGGAAAAAAGGTTAACAATATGAAAGAACT
AGATCCTGTTTAGGATATTAGAAACAAACTACCAGCTCGCAGTTCTATAA
ATCGGTTAAAAAATTCATCAGAACTTAAACATTAGATTTCCTCATTCATT
ACAGACTTATTTCAAGAAGTGTTGAGATACCCGGCCGTGAAATTCGATAA
AGACACGGTTGACTTGTGGTATCGACCAAATATCACACGAGATGAAGGTA
AGTTCTTTTGATTGATATTCTCATAATAAACAAACAGGATCTTTCAAAGC
TTTATGAAGAAAAAATGCTACAGGATCGTACCAAAGTTCTTTCGCATAAG
CTTTAAAACGTTTCCTTTGTACCTCAATAACTTTTTTGGATTTCCTGGAT
AACCATTCGGCTAGCTTTATTATCCCTATACTGATTCTTGCAGCATAGGG
AGACATTAAGTTCAACAATTTAACGGTGAGTATACCAATCATTTAAGACA
ATGAATGGACCCGGTGAGCTGCTTGAAGTGAGAGATTGGGCGACGAAAAT
TTTTTCACATTCTTCTAAACACGATAAGATGATATTTAAATGGGTCAGAT
TAGGATTTTGACTTTGACAAATACATAGCCTGCAAAAAAGTTGACGGGGC
CCATAATTTTAAAGATGGTATTGTCGGTCAAAAAGTTGAGCTCCTCGCTC
CCTAATATCGCTTGAATCTTCCTCAGCACACGATAAAACACGATAAATAT
AATTCTTCTCATCTTTGTAGCAACAAGCTTACTTCGAGACGCAGAGCCAG
GAAGTTTCTTGGTACGAGATAGTCAAACCTATGATGGAGCTTTCGGATTA
GCTGTGAAAGTGGATTCGCCACCTGCCAGTGTCCTGAAACAAGTCGATGG
AGATGTTTGTAAGTTTAACATTTTGGATTTGTTTAAGATGTATAAGTGAA
TTTCATATTCACATTCACCCTATGATTACTATGACGAAAATGAGTTGAAC
TATTTGATAATGTCAGTGATAGACGCGAAACTTGTTTGTAGAGTCGTCGC
TCTATTTTAATGATCATTCTTCCTCCTCTTTAATGATCATTCATCTTAAT
GATCACCTTCCCTATATTCTTTGAAGAAAACTTTTCCAATATTCTCTGTT
TTAGCGAAAATCGATTTAGAGAACGAACTGATACGTCACTTTCTTATCGA
ACCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAGCAACGAAGAACCAACTT
TCCCTAGCCTAGTTGCCCTCATCTATCAACATTCCATCACTAAGATGGCC
CTCCCAATCACTCTTCTTATACCTTACAAAGGTAAGCTTTGATTAACACT
TTCATTGAAAGTTTATGGAGTCATCTTCTATTAAAACCTTTCAAAGAATT
GATTCCCTTAACATGAAACTTAGACGAGAACCTAAAAACGTTCCTGGCTT
GAATTAATTTCCAAAGGCATCAATTTTTTATATGTTATGGTTAAACAGCG
ATAAGCCATAATCGTTGAGGCAGACTTTGATTACCCTGTGGGTCATCTAT
TTCGTTATGAATCTAACGACAAAGTAATGGTGTAACTTCTTATCTTCATA
TTGATAGACTCAGTTGACGGTGGCAACCCTGCAGACAACCGACTGTCAAA
ACTCAGCGAAACACAATTACTGGTCAAAGGAGCAGCATGTGATTTATTAT
ACCTGGGCGGTGTGAAGGTGGACAAGCTAACGGGTGATGGAGCTGTCCAG
TACGCCATGAACAAGGTGGCATCACTTTCCACCCAATTAAAGACTACAAT
CGTTAACATCAAAGTCAACCAAGATGGTATCACCCTCACCGATAACAATC
GAAGGTTTGTCTCTATTTTCATACAAACATATATCAGTCTAATCGAAGCT
GAGAATATGAAAAAAGCTCCGTTCTTGTAATTAGAGAATAGACTTCGACT
TGACTGTCCGAAAATGGCGGACAATTTAAAAAAGCAAGCACGCGAACAAG
AGATCTTTAGATCTCAATTAAAGTATGTTTGGCATAACATTTAAAATCCT
GCTCCTGTTTCCAGGATGTTTTTCCGGCAACATTTCCAGATGGCGAATGT
CCTACATTGTGGAGTGGATCCAAAATCACGACAAGTTAATTTGAAGACAT
TCGCGAATCGTGAAGACAAAGATGTCGGGTAAGAGTCTACTTTTTGTAGA
TTATATAGCTTAATTCTTTCGTTTACATGTTTGTTTTATAAGCATTGCAC
GTATAAGCATATCTAGGCTCAGATATTAGTAGGGGGAAATTTGTTCGTTT
TTTTGAGGTCGCTCGATTTTTTTAGTCAAAGCACTTGTTATACATTTTTG
GAAAGCTAAGGGGTAGGGGAATCAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCCAAGTTATTTTGATTCCCCTACCCTTTAGCTTT
CCAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAGCGATTTTACA
AATTTCCCCCTACTATATGTCAAAAATCTAATCATACACAGTAATGATTT
TGCCCTGTTTTTGGCTGAAATTTTACGGTTTCTCTGAATATTCCTATGAT
TTTTGCATGAGGAATATAAGCACCCTTATAAGCATTTTTTAGCCTTGTCA
AGCCCTCGAACTAAGCACCTCCGAGCCTGTTTTCTATATTTATAAAAAAC
ATGTATCTGGATATCTTGGTTTTATCGGAGCTCGTTTAAAGCTTTTATAG
AGTAGGGTTTAGATAAGGGTTTCGAATTCAAGATTTACAACCCATACCGT
CATATTTGAACGTTCATTTTTGTTTCCCTTTTTAGTTGTTTCGGCTTTGT
GGTAGAGAATGAAAGGAAGACAGAACATCAATGTTACATGTTCGCTGAAC
TGGAGCAAGATCAACCAGCTTCGGCCGTCATCAATTTCATACATAAAGCC
ATGCGGTACGCTCGTGTATAAACTTTAATGGTGGTGTTGGATTATGTTTC
AGTTGAGAAGCAAACGTAATGGAGAAAAATGGTTCCTATTCCACATGAGT
AGCGTTCGATACGTAGTTTGGCTCAACGGTAGAAGAGCACGCGTTCTCAG
ACCAGATGTAGAATTCGGGAAACCTATATAATACAATCATGTTAGAACTG
TAAAATAAAAAAAAATCATCTAACGAAAAACAAATCTGCTGTGGTAACAA
AATAAGCATAAGCTAAACAAAGACATATAAAAGCAAATTTAATTTCGAAG
ACAAAAGATGGAAGATGTTTTATTGGTAAAATACAGACTGGTCTGTAAAT
TATATTTATACACTTTTTTTATTTACTTACTGTCATGGTTTCGGTGACAG
CATGCAGGGATTTCCCGAGCTGTTAATTAAAATATACATTTAATTGTAAG
CATTTTACTGTACAAAAAATTATTCACTCTCAGAGGGTCAACGATATAGG
TTGGTTCAACGCTCAAAATTTTCAAAGACAACCTTTCAGAACATTTTGCT
ACTCAGTACTCAAATACTTGTTTTTTACAAGCATAACGTTTATAAGCATA
CGTAGGCTCACTATTTGGTACCCAAACAATGGCTCTATTGAACAATCGAA
TGCTAATCACATTGCGAGCCTGGTATAGGTGCAGACACTTGCTCATAAAA
AAACATGTAATATCGAATTCAAACTGGTGTCTCTAAGAGAAAAAGTAAAT
TTTTGTTTTGAAGAATTTTCATACTGTTGGCTTCTTGGCTACAATACATG
GGAACTTGATTTGATTAAATAAAAAGCAATTTGTTATACTTTGTAATATT
ATCGCGAAATATATTTGAAAATATTCCAATGTTTTTTCTACGTTTTCTAA
GATATATAGTTTTACAATATTCCTTCTTTGTTATTTAAAAAGATAAACAC
CCTTTATTATGTAAATAGATCTTATCTTAAAAAATCTATAAAATTAACAT
CTTCTGACTTTATATCCTAAACCTCGAATAAAAGGTTGCTTTCTGATGCA
GATCAATATGATAATTCTAATTCGCAATGATGGACTNATGATCTGGTCGA
ATGTCTTCTGACTTTACATCCTCAACCTCGAATAAAATGTTGCTTTCTGA
TGCAGATCAATATGATAATTCTAATTCGCAATGATGGACTTATTGGTATA
CTTAAAAAGAGCTAAAAACAGTAAAAAAGGCCTTTAAAAAATGTACAAAA
TCTAATCAGAGGATAATTATCAAAATAAATAATTTTTCAAGTTCTATAAT
AAGATATTTTAGGTGTGACTCGTCTACATCTTGAATTGAGTTTCATCTAT
AAGAAGTATGTAAAAAACATTGTTGAATCTCATAACTTGGCACTGCTTGG
CAATGTACCCATTTAATAGCATATAGTCATGCACAACGTTAAAAGGAAAA
AAATCCCAAAAACACAGCAAGCAGCAAACTCAAATTTTAAAGCTTTTATC
ACCTTTCTCCAGCCTACATAAAAAAGCATGCAGGAAGGAGCCTTGTCAAA
TCGCAAAAATTTTCTGTATGTTTTGTACGCCATCACTCAAAATTTTTTAA
ACTCTTATATTAGGCCTTCTTTCAACATTTAAAATCTTACATTTTGATGG
AAAATGCCTTTTTTCTCTGTGAGCTGTATCGTCTGGTTTAAAAGCTGTTA
AGCGATCAGTTTTATTTTCTGCCAAGTCTGATTTGAAAACCTTACTATCA
AATGCATTCTTGCAATGTTTTCGTTCAGCCCGAGTCCAATCTTGACTTGC
AATTCTTTCGACAGTGCACCAAGATTCCTTGTCCATATCTATTTCCTATT
CTAAATGTCTGCAAAATAAGAAGATAAAAAATTTCCCTTTCAATCACAAT
ACATATATGAACAAGAGATATATTTACTATGTTTAAAGATTCTACTTAAA
TCTAGAAAANTTACATATATGAACAGAGATATATTTACTATGTTTAAAGA
TTCTACTTAAATCTAGAAAAGAGCAGTCAACTTTTCTTTCGACTTTTCAA
CAGTCTGATACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011353XLOC_011353Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020226-exon-sc0000350-1575043694:265435..265504TCONS_00020226-exon-sc0000350-1575043694:265435..265504Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:262769..263038TCONS_00020226-exon-sc0000350-1575043694:262769..263038Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:260863..261155TCONS_00020226-exon-sc0000350-1575043694:260863..261155Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:259358..259450TCONS_00020226-exon-sc0000350-1575043694:259358..259450Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:258697..258834TCONS_00020226-exon-sc0000350-1575043694:258697..258834Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:258274..258450TCONS_00020226-exon-sc0000350-1575043694:258274..258450Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:257751..257997TCONS_00020226-exon-sc0000350-1575043694:257751..257997Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:257427..257540TCONS_00020226-exon-sc0000350-1575043694:257427..257540Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1575043694:254040..256219TCONS_00020226-exon-sc0000350-1575043694:254040..256219Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:265435..265504TCONS_00020226-exon-sc0000350-1510915933:265435..265504Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:262769..263038TCONS_00020226-exon-sc0000350-1510915933:262769..263038Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:260863..261155TCONS_00020226-exon-sc0000350-1510915933:260863..261155Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:259358..259450TCONS_00020226-exon-sc0000350-1510915933:259358..259450Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:258697..258834TCONS_00020226-exon-sc0000350-1510915933:258697..258834Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:258274..258450TCONS_00020226-exon-sc0000350-1510915933:258274..258450Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:257751..257997TCONS_00020226-exon-sc0000350-1510915933:257751..257997Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:257427..257540TCONS_00020226-exon-sc0000350-1510915933:257427..257540Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1510915933:254040..256219TCONS_00020226-exon-sc0000350-1510915933:254040..256219Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:265435..265504TCONS_00020226-exon-sc0000350-1491911889:265435..265504Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:262769..263038TCONS_00020226-exon-sc0000350-1491911889:262769..263038Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:260863..261155TCONS_00020226-exon-sc0000350-1491911889:260863..261155Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:259358..259450TCONS_00020226-exon-sc0000350-1491911889:259358..259450Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:258697..258834TCONS_00020226-exon-sc0000350-1491911889:258697..258834Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:258274..258450TCONS_00020226-exon-sc0000350-1491911889:258274..258450Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:257751..257997TCONS_00020226-exon-sc0000350-1491911889:257751..257997Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:257427..257540TCONS_00020226-exon-sc0000350-1491911889:257427..257540Clytia hemisphaericaexon
TCONS_00020226-exon-sc0000350-1491911889:254040..256219TCONS_00020226-exon-sc0000350-1491911889:254040..256219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:254040..265504 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0371821	0	0	0	0	0	0	0.00127839	0	0	0	1.09594	0	0.125843	2.06641e-08	0.000120953	0.34643	3.40555	4.04273	0.636697	1.47279	1.68851	0	0	0.292619	6.09027	1.43639	0.000487098	0.000141215
Blast
[Close]
BLAST of TCONS_00020226 vs. Swiss-Prot (Human)
Match: TENS1 (Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 8.586e-69
Identity = 126/286 (44.06%), Postives = 186/286 (65.03%), Query Frame = 3 
Query:  666 VKFDKDTVDLWYRPNITRDEATSLLRDAEPGSFLVRDSQTYDGAFGLAVKVDSPPASVLKQVDGDVSKIDLENELIRHFLIEPSKKGVRLKGSNEEPTFPSLVALIYQHSITKMALPITLLIPYKDSVDGGNPADNRLSKLSETQLLVKGAACDLLYLGGVKVDKLTGDGAVQYAMNKVASLSTQLKTTIVNIKVNQDGITLTDNNRRMFFRQHFQMANVLHCGVDPKSRQVNLKTFANREDKDVGCFGFVVENE-RKTEHQCYMFAELEQDQPASAVINFIHKAM 1520
            VKF +DT   WY+P I+R++A +LL+D EPG+F++RDS ++ GA+GLA+KV SPP ++++Q      K D+ +EL+RHFLIE   +GV+LKG   EP F SL AL+YQHSI  +ALP  L+IP +D  D     D+     S   LL +GAAC++L++  V ++ LTG  A+  A ++  +       TIV+ KV+  GITLTDN R++FFR+H+ +  V  C +DP+ R+  +KT      K    FGFV   +   T++ C++FAEL+ +QPASA++NF+ K M
Sbjct: 1453 VKFVQDTSKYWYKPEISREQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNK----KGDMTHELVRHFLIETGPRGVKLKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDESK--DSSGPANSTADLLKQGAACNVLFVNSVDMESLTGPQAISKATSETLAADPTPAATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQERKW-MKTEGGAPAK---LFGFVARKQGSTTDNACHLFAELDPNQPASAIVNFVSKVM 1728
The following BLAST results are available for this feature:
BLAST of TCONS_00020226 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENS18.586e-6944.06Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2[more]
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