TCONS_00020205 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020205
Unique NameTCONS_00020205
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2964

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020205 ID=TCONS_00020205|Name=TCONS_00020205|organism=Clytia hemisphaerica|type=transcript|length=2964bp
AATTAGGGCTGGGGACGACAAATTTTTCACGCTTGAAAACATTGAGTTGT
TCTCAATCTTCTCTCTTGGAGATGACGATGCCAGTGGAGAAACAATCAGA
CCTGGACAAAATCATTGCACTGCTAGATCAGAGCCGACACGTCAATTGCT
TACGACTGACCATCAACCAGAAGACATTAGTAGacggtggagttggtggt
tttcaCTTGCCAGGTGAACAAGCTTTCTCTGGCAATGTCAACAAAGAACT
TGCGGATGAGCAGACTCACAAACagAACACGTCATCACAAGTTGTACCAA
CCGCCAACGCACACCCTCTTCCATCACGCCCCTTATTCAAATCAAGGTCA
TACGAACACGAAGAATTTGGGAGCTCACCTGAAGACGACTTTCTTCTCCC
AACACGCTCCAAATCGTTCCGCCACATCCGCAACCCTTCACCACCACCTG
GACATCATATTCAAGATAACACGATGATCAATCATCGAATATCGACGCAA
TCAGACACGACGCACACGCCTGAAGGTGGAATCTTTATCCCTGAACCTGA
AAACGACAACGTCCATGACGGCTTCATCCCGATCGATCCTCCCGAATACC
CGACCGATGACGACCCACGAATTCATAGTTTCGATAGCGGTCAATTTGGA
TCATCTTCACCCGTATCCAACGGCGCTTTCTCAACTGGAAGtgagATATA
CAGACGACCACGTCCAAGTGATTACGTCATCAGAAAACGGCCCTCAAGCG
ATGTCTTTCCCGATAAATCCGATTATACGGAAGATGATGAGCCGTACATG
TTCAGGAACAGTCGTCCCTACTCTGATTGGACTTTGAACCTTCGAGATAC
TGATTACCACTTCTTCCCCTGGCAACTTGAGAATTTTACTGGGAACGGCT
CCATGTCGCCCAGTATTTCGAGTAGTGTCATCAGCCAAGGGTCTTCAGga
cttgttCCAGATTACGACGACAATGACTTAACCAAAGGTTTCAGCAATCT
TTCTGTCAAGGACCTCAAAGATGTTCACTTTGCAAataaaaaatggacca
aaattcgACAGATTGGATCTGGCGCATTCGGAACGGTGTACTTGTGTCGT
GACTTAACAACCGGTAAAGAGTTAGCCATGAAATGCGTGGAGACTGGGTC
CGTCAATCCAGCCGCCATGCAAGAAGTTGAGATCCTTCACCGAGAAATCA
ATCTTTATAAAACGTTGAAACACCAAAGGATTGTTTGTTACTATGGCAGC
ATACAAGACACTAAAAGTTTGTCAATCTTCATGGAATACATGGAAGGAGG
TTCACTACACGAGCGAATTTCTCGTTCTGGAGCTATGAGCGAAGATGATG
TGCGAAAATATTCTCGTCAAATGTTGGAAGGACTTGATTATCTCCACAAT
AACCATATCATACATCGCGACGTTAAAGGTGCCAACATCTTATTGGATAA
GAACGATAACTGTAAACTTGCAGACTTTGGTTCATCGAGGCAAATTAAGA
CAATCCGATCAAAAACGGGGTGCAAATCGGTTCACGGGACGCCCTATTGG
ATGAGTCCAGAAGTGATCAATGGGCAAGGTTATCGATGCAAAGCAGATAT
TTGGTCATTGGGATGTACAGTGGTGGAGATGTTGACCACCAAACCACCCT
GGTTCCACCTGGAACCTGTTGCCGCCTTGTTCAAGATCGCCACACAACCC
ACCAAACCACAACTGCAAGGGTCCTCCCTCATGTGCATCAAGTTCGTCGA
GCTCTGTCTTGAAAAGGACAGCAACGTTCGCCCATCTGCTCTTGAGCTAT
TACGTCATCAGTTCTTAGTAGACCGATAGCCTTGGTATGAAGCGTGTAGC
CTGACTTGAATGTGCGAGTTGTGGATTGGATATAGTGTCCTCAAAACAAG
GAGGAGAGAAGAGGATGTCACGTGACTCTCTCGTAATTCCAAAAAGATTC
TTTCAAGGAGATACGGAAATGAATATCGTGAAAGTTAAACCTTTTCAAAT
TAAAATCGAATGGAAATTCTCATTGAGTCTCCGAGTGTTATCAAACACCA
AGAGATATGGTTTTTCACCGAGAACGCGATCCTCCAGGGATTTTGGCTTC
CAATCTCTCCTGTTGCCAATGGTCAAATTAAACATTGAGAAAACACGAAT
AAAGTCGATCGATTCAGAGAAAAGCTCCTTTTGAGGGGCAGTTTTAGATT
CACCATTGGATGACGCTCGATAGTTCTAAAAAGCGACAGACCTATGCAAA
AATTGCGTTCGGACTTTTTGACGAAGCATTGTGAACGTATTTAAGGAAAC
AGTTTTTCAAAACGAAAATTCCATCCGTTACCCGAACGAACGAACTTAAA
GAGTATAATAAACGAAAAATACATTAAATGATTTGGACTGAATGAAAAGA
TTTGATAAACAGACAGAAGAAGAAGGAACTTTAAGACTTGAGTTTTTATA
TTCCCGATGAGATAATTATTAGACGATTTTTATGTGCATCGATAAACTAC
CGTTTGCACCGATCTGAACTTTTGGTggcagaaaaattatttcatataGT
ATAtgacttgttttgattttatctgcatataaacaaatatattgTTAGAA
AGCTTTTCTCGATAGATTAAAAAGTTATGGTCAAAAAGTGTCTTTACCAC
AACCCTACATATAGATTTGAGTACTATTTTTGCCAGAACTTTTTGGATAC
TTAGGTTTCACTCACAGGGAACGCTATCATACAGATGCAGGTCCGCAAAT
TCTTATCTGGTGCTTTCGGTAGTCCGCATTTTATGTCAACATTTTTATGT
AAATAGCCAATCCCATgtgatatattttttcaattttcctttagtttttt
aaagatttgttgtttttttgtctgttttcttTACCGTCAATATGACATGA
TTAGTAAGAAATTTGATGACTAGATAAATATATGCTCAGAATGAGCGCTA
ATTCGAATTAAATT
Run BLAST on NCBI

transcript from alignment at sc0000350:29785..44317-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020205 ID=TCONS_00020205|Name=TCONS_00020205|organism=Clytia hemisphaerica|type=transcript|length=14533bp|location=Sequence derived from alignment at sc0000350:29785..44317- (Clytia hemisphaerica)
AATTAGGGCTGGGGACGACAAATTTTTCACGCTTGAAAACATTGAGTTGT TCTCAATCTTCTCTCTTGGAGGTACACTGACTCTTCCACTATTTGCACAT TTACAAGTCTGTGCAAGAACCCTCTGTAACTTACCATATTACTTCGAATA AACACCACCTACCTTTTAAGCACCCCTCGAATAAATGCCCTCCCTAATAA CCGAGAAAATTAGCAAACGCCTTGGGCGTTTACTCGATGCGATTCAAATA AAGTTTTCTTCTGTATTAGTTTGAAGGGTATTTTAGCAGGGCAATATTTT TGACACTTCCCAAGTTTTCGTGATTTACAGTGACCTTTCTACGACTCCTG TAAATCTTTTCGCTCTCGACCATTAACCCGACATTGAGGATGAATAATAT CATACCAGTATAATCGATTTGGGTCTTGAAAAGAAAAACTGATTTTTAAA TGAGTAGCTGAAATTGAATTGCTTCTTGATAAAATTGTATTCGAACTTTC TTGAAATATAGTAACTGATGAGTCAAGAACTGAAATACTCTATCTCTTTC AGATGACGATGCCAGTGGAGAAACAATCAGACCTGGACAAAATCATTGCA CTGCTAGATCAGAGCCGACACGTCAATTGCTTACGACTGACCATCAACCA GAAGACATTAGTAGACGGTGGAGTTGGTGGTTTTCACTTGCCAGGTGAAC AAGCTTTCTCTGGCAATGTCAACAAAGAACTTGCGGATGAGCAGACTCAC AAACAGGTATTGTTTTGTTTTTCAGGTATTATTGGGCTTTCCAGGAAAAT AAAAGCATGAATGTGTTGTGTTGGGGATATCGGGCATTCTAAAGGCCAAT GACGAACGTTAATTGATATCCACGGATCATGTAATTTGACAAGCATAAAA TTACGAAATTTTGATAACTACTTTCAACGAAAAATCAATCTGGTAACGGT TTTTTTCCTGGAAAGACACTTGAAAATTTGACCCTTATTGCCCTCGACTC ATTTTTGTTGGAAGACACTATGCTTCCTACTAAGAAACACAAAGAAACAC ATTCCAAAAACTTGCTTTTTGGTATTTTGACACAATTTGCTTCGAATAAA TGCATCATAAGCAATTTTTCATTTCCTACTTTCCTAAATCGGTGTAAGAG AGACTGCATAAAAGATACATTTAAAATAATGACTCCTTTGACGTCACAGC TATTGACTGACGGTAAGCCGTTAATAAAAAGTGGAATCATTTCTTTCGCC TCAGTTCTCAGAATTCACTTTCTTTCGTTAAGGCAAAGAAAAAGGCATTC CTTTCCTTCTCAACTTTCTCAACATTTCTTTCGATGCGTGGGCTCATTAG TTTTGCTTATCTTTTCATCGCTTTTCGAACAAAAAACATTCTGAAATGCG GCTCATTTAAGAGCTCACTAAGCTCTCAATTACTTTAATGAATAAAGATA ATTGCATGATGCGTGGGCGAGGGCGTTACATGGAGAAATTTCGTGCAGAT CATTCAATTAAAATGCATCTAGCACTGATACCCAAATTACGTCAGAAATT TAGAAAATGACCCGTGTTACAAAGTCAGATTTTCCTTAGAAAATATTTCC CAACTAGACATAAAAACGTCAGTATTTTCTGTAAAATCATAGTGTCCTTC AGGGTCTCTTCCCTCTCATACCTAGAATCAAAATTTTCCATCCCCCCTCA TTTTTCCCCACCCTGCCTCCAAAAATTTCTCTGTCCTCCCCCCTCAATCA TAAAAAGCTGTGATTTGATGAATTTAACGCTATTTGTTTTCCCTAAGGTA GTTCTAATTCAAGAATAAATGGAAAGGATGGGGTTTTAAACCGTAATATT GCTGGTTGAAATAAATGAAAGAAAAACTAATCATATGCTATACACCCAAT TAAGTGATAGTAAAACCAGATGTTTTTCAATTTTGAATTGATTTTGGTGA GTTCCCCCCATGCCTAGAATGAAAATTTTCCATCCCCCCCCCTGGCTTCA AAAAAAATTCTTTCCCCCCTATACGTCCTTTTGACCTCAAAACCCATTCC CCCCTGAATTCAGGGGGGGGAGGACACAATGAAAATGACAAGTATTTTCA TCACTCTGTTCGGCATTCTATTTTACAGAACACGTCATCACAAGTTGTAC CAACCGCCAACGCACACCCTCTTCCATCACGCCCCTTATTCAAGTAAGTT CCTTTCGACCCTTTGATAAAAATTCCAAAATCTACATTTTCTGATTCTAA CTACGTTGTAATTATCATGTTATATATGCGAGATATTTGATTTTGGACCG ACCAGCACCTAAGCGACTCAATGCTGAAAAAATATTCTAGTCAAATTTCA AGCGGGACTAAATGGATATTTCCACCACAAATAATCGGGCTTTGGATTTC AGAAACTTCTCGAGAGGTTTGTGGCGTTTCATTTTTTTTGGTCTTGATTC TCAGAAACTGTTTATTTTCCAAACGTATCAGATTTTTAGCCTCAGATTCC TTCAAGTGTTATGATGTGTCTTTGACGTCCTTTGTTTATTTACCAAAATA GAAAAGAGATTTACGGAGTAACAATTTGGCTACGACCTCTCCTTACAGTA AAAACACAACCGCCCTCTCTCTTTGACTTTGCTCTCGTGCCAATGCTTTA TTATAACACCTCGTTTTCGACAGTTGCTAATTTTTTTGAAATTCTTCTTC GAAACTGTTCTTACCCCTCTTTGTTGGGGGAATTCTTATAGCGGCTAATT TCCAACTTTTGAACTGAAGCTGACGAATAACCATAAATACGAAAGTGTCG ATAAAATATATATTCAATAAGGACATATTTAGTTTTCACTTTGTGTTGTG GTACTGTCATTTCTCTTTTGGATACACTTCCAGGTTCACTGTAATTGATT TTGAAAATTCCAAAATTTTCCCTTTCCTCAGCCATGTTTGCTTGATAAGA GTAATAATATTCAAATGCCTATGCACACCTCGGATTCAAAGCCGACGACC GGGCGCTCTGGATACAATTCAGTGGAGACTCGCCGTGGTGTGTGTGCACG AGAAAGACCTTTTTGAAATATTTGAGCGGTTAGCTCAACTTTCTATTCTA AAGCCTTACATAAGCCCTCACAGTCACACGACGTCATTATATTTCAAAAG CTCTTTCATTTCTCTCTCCCTTTTTTTTTGATAAAAAGTTTGTTATTGAT GATGATTCAGAGTCGATCAGATATCATAAACTGTGTCGTATTATCTTTCC AACTAACCCCCTTCTCTCGCTTTACCTATTCACAGATCTTTTGAATGTCA TGTAGTGAAAAGACTCGCGGAAGTTTATCAGTTTGTTATCCTCCGTGTTT GTAATTCGATGACATTAAAGTGACTTTTGATCAAATGTCTACTTTATTTG TTTTGATTTTGAAGTATAACGTTCGTTCTTGAAAGTCTACTTTTACATGC ACGAACTTGAAAAGAGGGAGAGCGTAGGCTTTTCTTGAGATTACAGTAGA TGTATGTGATATTTTGCAAATGGATTTTATTTGACCAAGTTGTTGAAAAT AATTGACAAGGACGATATTTAGAACTTTATGTCTTGGGAATTTGAAATCA TGCGTGAACTAAATCACCATTACTTACCGTGAGTGTTTGAAATATTTTGA CTTTTTCAACAACTTTCTCTTTTTTACAAGTTAGTTTTTTATTATCAGCG CCAATTCATTCATTTATTCTCTAGGTACATACAGCCAACAGTCAGTGGAA TAGACCTTTTCATAAATTACGTCACGAACAACGCTTACCTCGTTTTCAAA ATATTGCCATGGTTATTGATTCCCAGAGGAGATCATAAGAAGTTTACTCT ATTTAAACAAGAGCAACACTTGAAGACTCGAGGGATTTAATCACCTTGGT AATATCTTCAAAACGAGGCAGTCGTTGAACTGAAAATGATTTTTGAAAAG ACTTATTGTAGTGGCATTTTCGACTGACCCTTAATGAGGTCCAAACTAAC AACGATTTTTGGCAAGTAAACTTGTCAAATCTCAGATTTTGATCACAATA AAGTTTTTTAAGGAGCTAGAATATGAAACTGCTTTGTCAATGGTTGGTGA ATATTAAACTTGGTTTGAATCCGTGGTTGTGTATCAATTAGAGCTTTTTG TTGATTTCTCTGTCTGTCTGCCGAATGTAGTTTGATTTGGTTTCTTTTTT TGTGGCTATCATCCAGAACTTCGTTCGTTTTTTCACTATGTGCCTTTAAA ATTGTTTTAATAAAGTAACTTTGTATTGCTGGAATAATCCTATTATTACC TATAAATTAAAAAAAAAATCAAGGGAAAAAGGGAATTTAAAGGGAAATCA AGGATTGATTTTGCCACAAATAATGCAACATTTCAATGTTTGACAAATTT ACATCTATTTTCATGGCTTAAATATTCAAGTTATTCTGCTCTATGTGAAA AACATGCTTACAAAAAACTTGAGATGGACTGCCACTGACTTCCTTTCGAC AGTAATTTTCTGTACATCCCGTTTCTCTAATTATTATTTTTATAAAGAAA CTTTCTATAGTAATTACTATATATCTCAGCATTCGATGAGATACGTTGTG TGGAGATATGTTTTCTTCTCAATCACTCTCGTGTTTTGATAATATATAAA CGATCGAGAATATTTTAAGTTTTTCCTTCATACCTTTACTTTACAATTGT GGATGGAGTGAGGTTTTATGATTAAGTTCAGGTTAGATTACAAAGGTATC TGATGAATGATGCATTCTTGTAACAGATTTTTTATGATATGTAATGCGTG GCAGTTTCTCTAATTCTTGGTTAATGATAGTACTTTCGTATGTTGATAAA ATCAAGGTTTTGATTTTATAGTCTGTTCACGGCCAAAAACGTGATAATTT TTTAATATACTCAGAAAGAGTTTAAAGCATCATAATACTGTAATAGTTTA TCAGATGGTTTAATCATACGAGAGTAGAAAAAATACAATGAAAAGTCATT TATCTTTTCTTGTTTAGCGATATTTGTTACTTTTGAATTCCTTGTCCATC GTAGTAAAAACTATGATGAGTAAATGACTTATTTTTACACTGAAGAATAT TTTGGTGTCACTTTTCTGTCATTTCAATGTTTCCAAAATATGGAAAGTGA CATAATGATCGGAAATTCAAAATAATTCTCTTTCTATCTATGAACAGCTT TCCTCAGCGTTTTTTGTTGGCATATAATTTTTTGATTGGTATAATTTTGT TCAGTCCAACTAATTAATTTTGACGAGTTTGGAAGATGTAGGAAGCTTAT TAAGTTCTGTCTTCATTTGGCAAACAATGTTGTATTATTTTTAACTTAAA GCCTTTTTTGTGTCCTCGTATTCTTGTCGGTGATTGGAAGCGTTATAAAC CATGAAGTTGATGATAAAATGATAAAAACTTTTCTGTACTGTTTGTTCTT CTCAGTTTTCGGTTCAAACTCTTGATAGCTCAAATACTCACATAGTTTTA GATTCAACCATTTATATTGAAGGGAGACTAGTTGAGATTAGTTATGTCGT GTTGTTGATAAGTCGTCGAGTCATGTCGAGTTGATGAGCCTCTTGAAAGT TGAGCAAAACGAGAAAATCTTTTGAAGAAAATAAGAATATTGAGTTTCGA GTCGCGGAAGGTTTTATTTATCGTTTCTCAATGTTCTGACCCTCCTCTAC CTTTAGATCAAGGTCATACGAACACGAAGAATTTGGGAGCTCACCTGAAG ACGACTTTCTTCTCCCAACACGCTCCAAATCGTTCCGCCACATCCGCAAC CCTTCACCACCACCTGGACATCATATTCAAGATAACACGATGATCAATCA TCGAATATCGGTATGTAACTTCTCCCACCATCATGGTCAGCCCCTCTTAC AGACCCTTAAAGTCAAAACTCTTCACAAATCGCATTTATAGACTCAAGGA TTAGGAATTTTTGGTTGACTTGTAGGAATACGTCTCTTGTGAAACGATCT CTTAAGAAAAATCGAACGTTCTGCCCTTTCATTTGGGTGATAATGATTCA ATCTACTAAAGCAAAGCAAAATCTCTCCCCCTCTATTGTGGTTGAATAAT AACAAACAGTTTCTTTGTTTTTGTTGACAGACGCAATCAGACACGACGCA CACGCCTGAAGGTGGAATCTTTATCCCTGAACCTGAAGTAAGTGATCTTA ATGCAATTTCTATATCTTGAAAATTTATTTCCAAGAGTCTATCCGACAAT TTGTATTGTCTTGTATTCAGCATTTCGGAAAAGTTTTTACTACAACTACG TTTTCATTAATATCCAGCTCGATCTATTTTTTGACCTCAACAAATTACTT CAAAATAGCTAGAAATATTAAGTCATGTATCTCGAGCTTTTCAAAGTCAT TGGCCCGCTGTTTTATATCCATACTACTATCTCTTCACCCGACAGAACGA CAACGTCCATGACGGCTTCATCCCGATCGATCCTCCCGAATACCCGACCG ATGACGACCCACGAATTCATAGTTTCGATAGCGGTCAATTTGGATCATCT TCACCCGTATCCAACGGCGCTTTCTCAACTGGAAGGTAAGAGAGAAGGAT TGGTTGCTAGGGTAACAAATGAAAGTGTTTAATATATTGTCAGCTATGTC TTACTATAAAATGCTTGTTGTGGACACCTAGACTTGTCATGAAACATCTT TTATAAGCATAGCAGGCCTTACCAATGATACATTGAAATCCTGACCTTTG GTTGTAATTTGTAAATTATATTTTTCTTTGTGAAACTCGAATTCTATAAA TCCATATTTTCTTTTTCAGTGAGATATACAGACGACCACGTCCAAGTGAT TACGTCATCAGAAAACGGCCCTCAAGCGATGTCTTTCCCGATAAATCCGA TTATACGGAAGATGGTATGTTTCTTATTTTACTAAAATTCTAGGTTACAC ACATCCCTATAATATGCTTTTATATAGGGAATGCGTATCGTGTATAAAAT TCCCGTCCCAGAATTACCTCTGTCTTTATGATTTTGAGTTTTAGAAACTT GATTAACTTGATTGGTAAGTTTTATAGTTTATAGTAATTATAAAATTTGA ATTAAAAATTTGAATGGCTAGAGTTAATACAATCGCTGGATTTCTGAAAA TCTTTAAGGAAATTGAAACAGGTTACCCCAAATTTGAGGTAATTCTGGGA CGGCAATTTAGACACGATTAGCATTACTATATTAAAACATGCGTGCAGCC TACTAAAACTCGTGTTTTACACTTTATGGTAATTGGACATTATGGTTCTC CCAGGCCAGACTATAAAAACCTTATATTTACTCCCAAAGAGGTTTAGGCT CCACTGGTCTCGCTATCGTTCTATTTTTAACTCTCATAAAAAACAACTTG TTGGTTCTATCCATTCATATCCATCGATTCGCCATTCATGAAACATTCTC CTTCCTTTGCATTTTCAGATGAGCCGTACATGTTCAGGAACAGTCGTCCC TACTCTGATTGGACTTTGAACCTTCGAGATACTGATTACCACTTCTTCCC CTGGCAACTTGAGAATTTTACTGGGAACGGCTCCATGTCGCCCAGTATTT CGAGTAGTGTCATCAGCCAAGGGTCTTCAGGTACGCGTGGCTAATCGATT TCTTTACCTTGCATGTTTCAGAACATTCTCTAACTCCTATTTGAACGACA TGCTGGAAGTTCGAAAATTTGATTATTTTTTATATTAGACATTGTTATTT TTTCCTTGCTAAATTTTACCATGCATAGTAAATTTTCCCTGAGAGCTTTT TAAGTTATCATATGCGACTCCAATGATCGTCATCCAATTGACTTCCACAT CTCTGACACAGGACTTGTTCCAGATTACGACGACAATGACTTAACCAAAG GTTTCAGCAATCTTTCTGTCAAGGACCTCAAAGATGTTCACTTTGCAAAT AAAAAATGGACCAAAATTCGACAGATTGGATCTGGCGCATTCGGAACGGT ATAGTTTGTCCCTTCTTCGAATTTGCAAATTAATTTTTAAATTTCTTAAA TGTTATTGCTTTAACCTACTTCACTTCCAGCTGTTTATAATGTTTACCAT CAAAAACTATCGCCAATTGCCCGCTTTTAAATCTTATCACTTATCTAAAA AAATATGATTATGTGATATAATAAAAAATCATCAAATTGCCGAATACCTA TCACAGAAAACCGAGCCGGCTGGCAGTGGCAAATTTTTAAACATGTAAAC CATAGACATTTGTTTTGCACCCATTTTAGCTTCTGTAATTCCAATATCAT TCATTCATACAGGTGTACTTGTGTCGTGACTTAACAACCGGTAAAGAGTT AGCCATGAAATGCGTGGAGACTGGGTCCGTCAATCCAGCCGCCATGCAAG AAGTTGAGATCCTTCACCGAGAAATCAATCTTTATAAAACGTTGAAACAC CAAAGGATTGTTTGTTACTATGGCAGCATACAAGACACTAAAAGTTTGTC AATCTTCATGGAATACATGGAAGGAGTAAGTTGTCTTCTTTGATGCATCT TTGTAAATATGATGGTCAACGTCTTTTTGGACCTACCTGGAGGTTCTATA AATTAACCTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT CGTTCGTTCGTTCGTTCGTTCGATTTTTTTGCTCAAAGTGGTGTATTAAC AATGCCCGAAACTAACCGAGTCCGATTTTTTAGAAAAAAATTTTTCCGGC GGAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATT GGTCGGACTTTTTCCTTATTTTAGGTTGTTTTTTGGACCTACCCCGGTGG GGTGGAGCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTAACC TTTCTCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCGTATTTTTGA TGACGGCTTGAATCTAGCAATTCCTTTGTCTTCGAGTGATATATTTTTCG AAATTAAGCGGTAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAG GCGGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCTGGCGGGT CGCTCAAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACC AAAGAGATTGACCTCTAGCCTTCGGCTTGAAACTCAATGGGGTGGAGGTC CTATAAATTAACCCGTGTTCGTTAGTTAGTTCGTTCGTTCGTTCGTTAGT TACCAACTTTTCTCGAGATTGGCTCATTAAATTTTTCTGATTTTTTGCAC AAAGGTGCATTACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAA AAAAAATTTTTTCCGGCCGGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGTTTTTTGCGATTTTTTGC ACATAGATGCACATTAGTACTGCCGAAAAGGTGTCGGAAACCGTTTGCCG AAAAAAAATTTTTTGCGCTCTGTAGAACCGGAAATGTGCCGGAAATCGTC GTTTTTTTCACATTTCCGTCACATTTTTTCAACTTATTTAATTGTTCCTT TACAGAAAAATGTTCTTTATGATGATGCCCAAAACTTAGCATNTTTTCCG ACCGAAAATGCCGGAAATATGCCGGAGAAACCGGTTTTTTGACATTTTCT CGATTTTTCATCCTTAGTTTTTTCTGATTTTTTGCAGAAAGATGCGTATT CGCAATGCTCAAAACATGACCGAGTTCGATTTTTTTATAACAATTTTTTT CCGGCCGAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTGCAGACTT TTTCCTAACATTTCATTTCTTCCTAAAAACATCATTGATAGCAATTCCCA CCATCAAGCATGATTCGATTGTCAATATAACTGATTTCTGCAACCGGAAC TTTCTATATCTTTTTTCCCTTCTCCCCTTCCCTCTCCCCATCAACAATCA ATGATGAAATTTAACGCGTTATGCCCTTTCGCTAAACATTATATTTTCTA ACGGATTGTTTCCGTTTTTCTCCTTATTGCTATCTAACTTTCATCATTAG GTAGATCCACCCAGCATCTAGCTTGTTTTGGTTGTACTAGAATGTACTTT TATTGAGCCAATCTTATATTTTTATTCAAATTTTCCAAAAAAAACTTGTG CTATCGATGAATACAAAAGCTGATTAGGAGAGTTCATCTAACAATTCCAA ACCATCTAAAGAACGACAAAAACTTAAAAAAGAACGACAAATTTTGCATG CATTCTAGTGCAATATTTGATGTTCGACCAAAATTTGTCTGGTATCCTTT ATAATCAACCTTTGTTACGTATGATTCCTACTAGCGACACAACATCACAT CTTAACCTTTGTCATTTCTCTTCTTTTAGGGTTCACTACACGAGCGAATT TCTCGTTCTGGAGCTATGAGCGAAGATGATGTGCGAAAATATTCTCGTCA AATGTTGGAAGGACTTGATTATCTCCACAATAACCATATCATACATCGCG ACGTTAAAGGTATTTTAATCTCCGTAACCTTATTATACGATACCTGTAGA ACTAATTTTGTCAGTCACTCTAAGTTTTGCATGCCTAAGTACATCGAAGC CATTGTCTAGCCTTTCGGTCGAATCTGTTAGCAAGTTTGAGAAACAACTC CACCACTAGTTGCATTCGGAATTCTTTCACTTATTTTCACCTTCATCATA GGTGCCAACATCTTATTGGATAAGAACGATAACTGTAAACTTGCAGACTT TGGTTCATCGAGGCAAATTAAGGTACGTTTATCTCAATTTACACTTGTCA ACTTTCAATTTTAATTATCCTTTTAGCGGCGACATGCTCCAAGACGGCCT TTAGAGTTGCCTTATTAATACTCAGTCGGAATATTCATTTATTTAAGGGC TCTGACCATNCTGTTACGTATGCTTCCTACTAGCGACACAACATCACATC TTAACCTTTGTCATTTCTCTTCTTTTAGGGTTCACTACACGAGCGAATTT CTCGTTCTGGAGCTATGAGCGAAGATGATGTGCGAAAATATTCTCGTCAA ATGTTGGAAGGACTTGATTATCTCCACAATAACCATATCATACATCGCGA CGTTAAAGGTATTTTAATCTCCGTAACCTTATTATACGATACCTGTAGAA CTAATTTTGTCAGTCACTCTAAGTTTTGCATGCCTAAGTACATCGAAGCC ATTGTCTAGCCTTTCGGTCGAATCTGTTAGCAAGTTTGAGAAACAACTCC ACCACTAGTTGCATTCGGAATTCTTTCACTTATTTTCACCTTCATCATAG GTGCCAACATCTTATTGGATAAGAACGATAACTGTAAACTTGCAGACTTT GGTTCATCGAGGCAAATTAAGGTACGTTTATCTCAATTTACACTTGTCAA CTTTCAATTTTAATTATCCTTTTAGCGGCGACATGCTCCAAGACGGCCTT TAGAGTTGCCTTATTAATACTCAGTCGGAATATTCATTTATTTAAGGGCT CTGACCATAGTGAATTTTGATATTTGTCATGTACAAAATATAAATTTCTG CCTGATTTAGCTGGCAAAACTTTGACATGTTATACATTTTCTGTTAGGCC AACTATCTTTGAGTCTGAAAATTTAAGAATCGCAAAGAAAAAATTTGATG AAGAAGAAAATGAAGACTTTTGCGACGAAGAGTATTTCAACTTTGAAGAC CTTATTTTGATCGAAGAAGAAATATTTTGAAAAAACTTTTGTGGTAGATG GTGTATCTTTTACCGAACTAGAAATCTATTTTCGGAAAATTTTTCTAAAA GCTTAATCTTGAAAAAAGTGCTTTTTGACCAATTTTTCATCCCAAATGTT CATAGAAAAACAGCTATTACTCTTGATGCATCAACTTAGAAAATTGTTCC GAAAAATTTAAAACAGCTCAATTATTTGCGGACAGTTTGAAAAAATATAA ATGTTTGAAATAATTTTGTAAAGACAATTCTTTGTTAAAAGTGTAAAGGA ACCTCAGACATAACTGTTATGCTCAAATACCAAAATCAATTTTTTGACTA TGGTCAGAGTCCTTAAACTTCCATTTTCCATTCTTATAGACAATCCGATC AAAAACGGGGTGCAAATCGGTTCACGGGACGCCCTATTGGATGAGTCCAG AAGTGATCAATGGGCAAGGTTATCGATGCAAAGCAGATATTTGGTATGTG TTCACCGTTTAAAGTTCTCAGTTTTCGTAATTGTTTTTGGCAGATCGGAT CTATCGGTTGATGGGTATATTAGAACCCAATAGAAACAATTCGGACTAGT TTGATTAATTTTAGAACCCATTTAAAGTCTTTAGACCTGAGTAACATGTT TTATGACGAAAGAGTATTAAAAATACACAGAGAAACACCCACGCTCTATT CAATTAATTAATTGCTTCAAAATGCGTTGACTCTCACTTGAGATATTGGT ACAAGTTGCAGAAGATATAATTTTGATTGTGCTTACTTCAGGTCATTGGG ATGTACAGTGGTGGAGATGTTGACCACCAAACCACCCTGGTTCCACCTGG AACCTGTTGCCGCCTTGTTCAAGATCGCCACACAACCCACCAAACCACAA CTGCAAGGGTCCTCCCTCATGTGCATCAAGTTCGTCGAGCTCTGTCTTGA AAAGTAAGTAACCTTCTTATACACAGAGGAATGCTAAGACTTTTACCCAA TGAGTTATTAAAAAATGCTATAAAAGTCATTATCTACAAAACAGTATAAA GGTGTTATAAGGAACACGAATCTTTAGTGGATGCCAGCTGCCTATAAAGT CCTTTAAATTGATCAAGGTTACCTTTTGGCTCATATCCTCTGTGTTTTGA TTGTTGTTCTTCTTCGCCTTTGATTGATAAAACAGTCAATTGAAACCTAA TGGTTTTCAAACACAAATTTTGATTGAAGTGGATTAGAATTAATTACCAA TCAGTTAGATCTTCTTAATTGTTTCGCTTCGTTTTCTGATTAATTCATTT AATTATCGCCATCCACTTTCTTTTCATTGTTCAGGGACAGCAACGTTCGC CCATCTGCTCTTGAGCTATTACGTCATCAGTTCTTAGTAGACCGATAGCC TTGGTATGAAGCGTGTAGCCTGACTTGAATGTGCGAGTTGTGGATTGGAT ATAGTGTCCTCAAAACAAGGAGGAGAGAAGAGGATGTCACGTGACTCTCT CGTAATTCCAAAAAGATTCTTTCAAGGAGATACGGAAATGAATATCGTGA AAGTTAAACCTTTTCAAATTAAAATCGAATGGAAATTCTCATTGAGTCTC CGAGTGTTATCAAACACCAAGAGATATGGTTTTTCACCGAGAACGCGATC CTCCAGGGATTTTGGCTTCCAATCTCTCCTGTTGCCAATGGTCAAATTAA ACATTGAGAAAACACGAATAAAGTCGATCGATTCAGAGAAAAGCTCCTTT TGAGGGGCAGTTTTAGATTCACCATTGGATGACGCTCGATAGTTCTAAAA AGCGACAGACCTATGCAAAAATTGCGTTCGGACTTTTTGACGAAGCATTG TGAACGTATTTAAGGAAACAGTTTTTCAAAACGAAAATTCCATCCGTTAC CCGAACGAACGAACTTAAAGAGTATAATAAACGAAAAATACATTAAATGA TTTGGACTGAATGAAAAGATTTGATAAACAGACAGAAGAAGAAGGAACTT TAAGACTTGAGTTTTTATATTCCCGATGAGATAATTATTAGACGATTTTT ATGTGCATCGATAAACTACCGTTTGCACCGATCTGAACTTTTGGTGGCAG AAAAATTATTTCATATAGTATATGACTTGTTTTGATTTTATCTGCATATA AACAAATATATTGTTAGAAAGCTTTTCTCGATAGATTAAAAAGTTATGGT CAAAAAGTGTCTTTACCACAACCCTACATATAGATTTGAGTACTATTTTT GCCAGAACTTTTTGGATACTTAGGTTTCACTCACAGGGAACGCTATCATA CAGATGCAGGTCCGCAAATTCTTATCTGGTGCTTTCGGTAGTCCGCATTT TATGTCAACATTTTTATGTAAATAGCCAATCCCATGTGATATATTTTTTC AATTTTCCTTTAGTTTTTTAAAGATTTGTTGTTTTTTTGTCTGTTTTCTT TACCGTCAATATGACATGATTAGTAAGAAATTTGATGACTAGATAAATAT ATGCTCAGAATGAGCGCTAATTCGAATTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011345XLOC_011345Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020205-exon-sc0000350-1575043694:44247..44317TCONS_00020205-exon-sc0000350-1575043694:44247..44317Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:43562..43765TCONS_00020205-exon-sc0000350-1575043694:43562..43765Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:42125..42189TCONS_00020205-exon-sc0000350-1575043694:42125..42189Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:38458..38611TCONS_00020205-exon-sc0000350-1575043694:38458..38611Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:38131..38187TCONS_00020205-exon-sc0000350-1575043694:38131..38187Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:37733..37872TCONS_00020205-exon-sc0000350-1575043694:37733..37872Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:37404..37498TCONS_00020205-exon-sc0000350-1575043694:37404..37498Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:36688..36849TCONS_00020205-exon-sc0000350-1575043694:36688..36849Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:36320..36456TCONS_00020205-exon-sc0000350-1575043694:36320..36456Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:35793..36005TCONS_00020205-exon-sc0000350-1575043694:35793..36005Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:33509..33638TCONS_00020205-exon-sc0000350-1575043694:33509..33638Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:33246..33316TCONS_00020205-exon-sc0000350-1575043694:33246..33316Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:31825..31928TCONS_00020205-exon-sc0000350-1575043694:31825..31928Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:31365..31526TCONS_00020205-exon-sc0000350-1575043694:31365..31526Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1575043694:29785..30983TCONS_00020205-exon-sc0000350-1575043694:29785..30983Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:44247..44317TCONS_00020205-exon-sc0000350-1510915933:44247..44317Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:43562..43765TCONS_00020205-exon-sc0000350-1510915933:43562..43765Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:42125..42189TCONS_00020205-exon-sc0000350-1510915933:42125..42189Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:38458..38611TCONS_00020205-exon-sc0000350-1510915933:38458..38611Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:38131..38187TCONS_00020205-exon-sc0000350-1510915933:38131..38187Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:37733..37872TCONS_00020205-exon-sc0000350-1510915933:37733..37872Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:37404..37498TCONS_00020205-exon-sc0000350-1510915933:37404..37498Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:36688..36849TCONS_00020205-exon-sc0000350-1510915933:36688..36849Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:36320..36456TCONS_00020205-exon-sc0000350-1510915933:36320..36456Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:35793..36005TCONS_00020205-exon-sc0000350-1510915933:35793..36005Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:33509..33638TCONS_00020205-exon-sc0000350-1510915933:33509..33638Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:33246..33316TCONS_00020205-exon-sc0000350-1510915933:33246..33316Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:31825..31928TCONS_00020205-exon-sc0000350-1510915933:31825..31928Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:31365..31526TCONS_00020205-exon-sc0000350-1510915933:31365..31526Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1510915933:29785..30983TCONS_00020205-exon-sc0000350-1510915933:29785..30983Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:44247..44317TCONS_00020205-exon-sc0000350-1491911889:44247..44317Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:43562..43765TCONS_00020205-exon-sc0000350-1491911889:43562..43765Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:42125..42189TCONS_00020205-exon-sc0000350-1491911889:42125..42189Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:38458..38611TCONS_00020205-exon-sc0000350-1491911889:38458..38611Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:38131..38187TCONS_00020205-exon-sc0000350-1491911889:38131..38187Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:37733..37872TCONS_00020205-exon-sc0000350-1491911889:37733..37872Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:37404..37498TCONS_00020205-exon-sc0000350-1491911889:37404..37498Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:36688..36849TCONS_00020205-exon-sc0000350-1491911889:36688..36849Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:36320..36456TCONS_00020205-exon-sc0000350-1491911889:36320..36456Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:35793..36005TCONS_00020205-exon-sc0000350-1491911889:35793..36005Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:33509..33638TCONS_00020205-exon-sc0000350-1491911889:33509..33638Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:33246..33316TCONS_00020205-exon-sc0000350-1491911889:33246..33316Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:31825..31928TCONS_00020205-exon-sc0000350-1491911889:31825..31928Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:31365..31526TCONS_00020205-exon-sc0000350-1491911889:31365..31526Clytia hemisphaericaexon
TCONS_00020205-exon-sc0000350-1491911889:29785..30983TCONS_00020205-exon-sc0000350-1491911889:29785..30983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:29785..44317 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11887 0.987274 0.861812 0.901443 0.00291027 9.14166e-05 1.03277 0.136449 2.34158 2.76926 1.28755 2.1361 6.37294 3.39083 1.60019 4.16818 3.74102 2.76413 7.54127 5.49729 6.08796e-06 0.0013435 5.59252 6.47527 0.388971 1.98395 4.33357 1.93694 1.62536 1.21271
Blast
BLAST of TCONS_00020205 vs. Swiss-Prot (Human)
Match: M3K3 (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 1.884e-84
Identity = 146/266 (54.89%), Postives = 185/266 (69.55%), Query Frame = 3
Query: 1044 WTKIRQIGSGAFGTVYLCRDLTTGKELAMKCVETGSVNPAAMQEVEILHREINLYKTLKHQRIVCYYGSIQD--TKSLSIFMEYMEGGSLHERISRSGAMSEDDVRKYSRQMLEGLDYLHNNHIIHRDVKGANILLDKNDNCKLADFGSSRQIKTI-RSKTGCKSVHGTPYWMSPEVINGQGYRCKADIWSLGCTVVEMLTTKPPWFHLEPVAALFKIATQPTKPQL------QGSSLMCIKFVELCLEKDSNVRPSALELLRHQF 1814
            W + + +G GAFG VYLC D+ TG+ELA K V+    +P   +EV  L  EI L K L+H+RIV YYG ++D   K+L+IFMEYM GGS+ +++   GA++E   RKY+RQ+LEG+ YLH+N I+HRD+KGANIL D   N KL DFG+S++++TI  S TG +SV GTPYWMSPEVI+G+GY  KAD+WSLGCTVVEMLT KPPW   E +AA+FKIATQPT PQL       G   +   FVE      +  RPSA ELL H F
Sbjct:  362 WRRGKLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGMRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHGRDFLRRIFVE------ARQRPSAEELLTHHF 621          
The following BLAST results are available for this feature:
BLAST of TCONS_00020205 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M3K31.884e-8454.89Mitogen-activated protein kinase kinase kinase 3 O... [more]
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