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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020149 ID=TCONS_00020149|Name=TCONS_00020149|organism=Clytia hemisphaerica|type=transcript|length=969bp
TTGTTCTTTAGAATGAAAAGTCAAGCAGTTTGTTAGTCGATAAACTGATT
TTAAACTACTAATCaccaaatagaaaatgactTGTAGGTTCTTTGGGGAA
ATAGGAAGAAAAAATCAGTGGTGAGGGGGAGGGGCAAACTTCGTGACTTT
AAGGCGCACGGTAGGAAAGTTTATGAATGTTTACGATTTTTCACTGTAGG
AAAGTGGTAGAGGGAGGTTCATTCATTTCTGAGGATAGTGGGTGGATTAT
TTCGGCATTGTCTTAGTTGAGAGTTGAGGTTTTATCAGATtagtttttag
tatttttaatgAGGGATGATTCTGCTGTTTTTTGAACAGCCCGTCTTACG
TGGCACAAAGGTAAAGTATTCGGCTAAGTTGCGCAAGGTGCACGACCAAG
GTCTATTTCCCACCTAGTCATACCAAAAACATCGAGTACAAAATGGTACT
CGATACCTTTCTGCTTAATGTTCGGAAaataagagaaggatcaagagtag
gtggagcaatccagggagaaagagtagTACCCTcacctacctttgggtag
atagctatcgaaagaggagccttcgggttgcATCCGAGCACTGAGCTTCT
TTATACATGAAATAATAGATGAAACTGAGATGAAATCATCCAAATTCGTA
CTATCAGACAAGTTTGACCAAAAAGCcttttttatttggaaaaagagaaa
atctttttgaccACAATAATTTCGAAGTTGACTTCGAGGCTACTTTAAAA
AGCTATCGAGGTTACTTTAGAAAGTAATATTAAAAAGCTCCATAAGATGT
CTTGTTTTGTACATGTCTGTGAAATTCCTTTAAAGTCAAAACTTTTTGGC
CAATGTTTCTGTATATGAAAAAGATTATAAAGTTTTTGTCAGAGAAAGTA
GTTGTTTTTACGGTACAAGCTAGTCGCTAAAGACATACCTGGTCAAGCAT
GGCTTTGAACGATTTTAAC Run BLAST on NCBI transcript from alignment at sc0000349:265651..266619 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020149 ID=TCONS_00020149|Name=TCONS_00020149|organism=Clytia hemisphaerica|type=transcript|length=969bp|location=Sequence derived from alignment at sc0000349:265651..266619 (Clytia hemisphaerica)
GTTAAAATCGTTCAAAGCCATGCTTGACCAGGTATGTCTTTAGCGACTAG
CTTGTACCGTAAAAACAACTACTTTCTCTGACAAAAACTTTATAATCTTT
TTCATATACAGAAACATTGGCCAAAAAGTTTTGACTTTAAAGGAATTTCA
CAGACATGTACAAAACAAGACATCTTATGGAGCTTTTTAATATTACTTTC
TAAAGTAACCTCGATAGCTTTTTAAAGTAGCCTCGAAGTCAACTTCGAAA
TTATTGTggtcaaaaagattttctctttttccaaataaaaaagGCTTTTT
GGTCAAACTTGTCTGATAGTACGAATTTGGATGATTTCATCTCAGTTTCA
TCTATTATTTCATGTATAAAGAAGCTCAGTGCTCGGATgcaacccgaagg
ctcctctttcgatagctatctacccaaaggtaggtgAGGGTActactctt
tctccctggattgctccacctactcttgatccttctcttattTTCCGAAC
ATTAAGCAGAAAGGTATCGAGTACCATTTTGTACTCGATGTTTTTGGTAT
GACTAGGTGGGAAATAGACCTTGGTCGTGCACCTTGCGCAACTTAGCCGA
ATACTTTACCTTTGTGCCACGTAAGACGGGCTGTTCAAAAAACAGCAGAA
TCATCCCTcattaaaaatactaaaaactaATCTGATAAAACCTCAACTCT
CAACTAAGACAATGCCGAAATAATCCACCCACTATCCTCAGAAATGAATG
AACCTCCCTCTACCACTTTCCTACAGTGAAAAATCGTAAACATTCATAAA
CTTTCCTACCGTGCGCCTTAAAGTCACGAAGTTTGCCCCTCCCCCTCACC
ACTGATTTTTTCTTCCTATTTCCCCAAAGAACCTACAagtcattttctat
ttggtGATTAGTAGTTTAAAATCAGTTTATCGACTAACAAACTGCTTGAC
TTTTCATTCTAAAGAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020149-exon-sc0000349-1491911889:265651..266619 | TCONS_00020149-exon-sc0000349-1491911889:265651..266619 | Clytia hemisphaerica | exon |
| TCONS_00020149-exon-sc0000349-1510915933:265651..266619 | TCONS_00020149-exon-sc0000349-1510915933:265651..266619 | Clytia hemisphaerica | exon |
| TCONS_00020149-exon-sc0000349-1575043694:265651..266619 | TCONS_00020149-exon-sc0000349-1575043694:265651..266619 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000349 | supercontig | sc0000349:265651..266619 . |
Blast
The following BLAST results are available for this feature:
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