TCONS_00020123 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020123
Unique NameTCONS_00020123
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2875

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020123 ID=TCONS_00020123|Name=TCONS_00020123|organism=Clytia hemisphaerica|type=transcript|length=2875bp
CTAACTTGAATACGAGCTTTCTTACGAAGACTTTGACGCTTCTTGATGAC
TGTAACCTTCAATAGCTTCCAGCACCACAGTTGCAGCAACGAAAACAGAT
CTCCCATCACCATCAAATGATACAACATCAAGTGAACCGATATCCAAGCT
TACCACAACTGAATCTAAACTCAatacaggtcaacaaagtaaTTTTGAAA
TGAATGCAGTTAAAAAACAAGAATCTCCACGTTTTAAACCAAAAACGCAA
GATCATGAAGAAGCTGTTTTAACCAATACCTCAAACATGACCAACACAGA
AAGTAAAAACATTTGTGAATGGGATGGTAAAGAGATTCAGAATCGAACTT
TGGTTGGTGGAATCAACTCTGGTGATTTCAGAGAACATACCCAAGCAACT
ACTATGAAAGAATGTATGGGCCAATGTTGCAAAGAGGAAGATTGTGATCT
TAGTTTCATGATTGATAAGGATTGCTATACAGTGAAATGCTCCAGAAGTG
ATTTATGTCAAACCAGGAAAGCTAAAGCAACTTCTTTCATACCAAGAATC
GCTtacaagaaaaaatcaaatgttgTAGAGAacttgAACGAGAAAGAGAA
CGAAAAGATGGAGATCAGCAATAATTCAACATCCCTCTCGTCATCAAATA
CAACAAAAGGAGACGCAAAATCATCAGAAGCAAGTCTCGCTACACCAGTT
CTCGcTGAACCCAAAAAGCATTCCTGCAACGCCGGTAAAATCATATACAA
CGCTACCCTGAGATTAGGTATGCACTCCGGGATGTTCACGAAGCTCGGGC
GCGTGAACAGCATGGACGACTGTATAGAACGATGTTGCAAATCATCCAAT
GCAGACGTAGCTTATAAACTAGGCTCTTTTTGTTTTGCTGTCAAATGCAA
GACAAGGGAAATGTGCAAACCTTCGCCGACGATGTTTTCTGATATCACAA
GTTTGAATTTGAATCCAGCTATCTCGTTTTTGAATCAAGATAAAATGCCA
TTATCAGTTGTAGATGAGACAGACAAAGACATATTAGGTTCAATGTATTC
CACTGCGCTTGATACAGATGACCTCATAAATATTGTCATTCGTAACTTAA
CACATCAAGTCCGCCCCACTGCATCCGCCAAACGCCATAAAAGCCACCCT
CATTCACAATCATCCGTAACATCAAATTCCATACAACATAATACCATAAC
ATCAAATTCCATACAGCATGATATTATATCTTCTGAACAACAAGTTGACG
ATGATATTATAACTGAAGGTTACTGGGATGCTGgttcAAATGAAGGAACA
TGTTCTGACAGTCCAATCACTTATAATGTGACTCTTAGAGGTGGAATACA
CGCAGGTAAATTTACTCAACTTGGACGTGGTATTGACATGAGAAGTTGTG
TAGGGCGTTGCTGTAATACGCCCTTATGTGATGTGGCGTTTATGTTCTCT
GATAAATGTTATGCGGTTGGATGTTTCAATGAGGCAGATTGTCAAGCCGT
TGTCGCGAAGCCGTCTGCATTGAGCCCTAAATTGGCGTACATTTCGAAAA
ACCGTGGATCATCACAGCCGGCTATCACGGACGGCATCGAGTTTAAAGTA
CAATCAGAGGGAGTATGCAGTATCAATAAAGTGAAACATGGTCCAGTCTA
CAAAAACAAAACGCTTATTGGTGGTATGAAAGCTGGCAATTTCTCTTATC
TCGGCAAAGCAAAtgacaTCACACAATGTCTCAGTAAATGTTGTTCGTCT
GGTGGATGCGATTTAGCGTATTTGGTGAATCGTGATCAATGTTTTTCAGT
CAACTGTTTCACACCAGAGCTGTGTCAAGTCACTGATAAACTATTTCATA
ACCGTGATATCGAGATTGCGAAATTAATCAAACCCAAACACAGACATCAA
ATCAGTAGAGGTCTTTTAGCAGCTTATTTCGCCATTGGATTGCTGGGTGC
TGTGGTTGGAGTGGCTGGATTTCTTTGGGCTGCTCTTATCTTCGTCAAAA
GgaatGAAGTGAAAAAGAAGAACATAGCGGCACGAACGAGAAAAGAAGAT
GACGAACAGAAACCCGAAAGATGAACGGaaacattttgacaaaaaatctc
ttttggtgGTGCTGTATGGGTTGGTTGACGTATAAAGATGGCTAACGTTG
ACCTTCGAATGACGTAAGCATATTAGATAACGGACGAAATGAACTTTTGA
GAATTCCTGAAACAGTAACGAAATACGCCTCCAATGAAGATTTTCAAATA
ACGTTGACGAAAACTGTGGAAAAAGACCATGTTGGATAAAAACGCTGTAT
AATATAAATGACTTGACTTTCGGTGCCGTAGAGTTTGAGCGTTTTAACGT
AATTAGATGGTCATAAAATGACGAAGGGACAGATCGATTATTAGATACAG
CCCTGAATAAGTCATTATGATTATTGACAATGTAGATAGAAATGACAATG
TAAAAAGAATATTACACAGACCCGAATTGATGTATAATTGACATGGATAG
CGATTCGTTTGAACTTGGACTTGCTGTCTTtataatgatattttttttgt
tttttgacgaagattttattttctgatagctaattatttttgtttagatT
ATTATATTACTTGTTTAGTCCTCTTTTCACTGAAATTTATTCTTCGCATG
TTTGGATCTCCTGAAAATTGGGTGCCCGGTATGTGTGAGCCGTCCTTCAa
aagggtacaaaaaccattaaaaagcaaattgtcTGTAGGGGttagaaaat
tatgaaaataaaaaatcgaccccctcaaagggtcataaattcgtGAAATT
TTGACTATAATTTGAAGATGTTGGCTGAAATTTGGGGAaatgtctctcta
agggtggctaaaacgtttaaaaaag
Run BLAST on NCBI

transcript from alignment at sc0000349:291697..304884+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020123 ID=TCONS_00020123|Name=TCONS_00020123|organism=Clytia hemisphaerica|type=transcript|length=13188bp|location=Sequence derived from alignment at sc0000349:291697..304884+ (Clytia hemisphaerica)
CTAACTTGAATACGAGCTTTCTTACGAAGACTTTGACGCTTCTTGATGAC
TGTGTAAGTAGTGGTATTTCCATAATATGAGCCTTTGTAACTCCAAATCT
TCCCTTCATCGGTAtcaaaaacacccccttctcacagaccctgtACGATT
TTtctcagccagtgggggtatagataacggacaaaaaattgatggggatt
gatatccCCATATTCTTTATGGCCgtggatttgaattccattgttttcga
gccagaaaagTCGAAACTAGGATCGAAAAATTAGCActatattttgcagt
gagaattTGCTTATGTATGAATATTTTCAGCAAGAACAAAAAATTtgtgt
ataattttccactggggacgatattttggccaatttttccagtgggaagg
ggttccagtgggtctgtgagaattgGGTGTTTGAAACTGATTCCCTAAAG
AATTATTAATAACTCGGATAAATCTAACTTTTCCCCATGCGTGTTTGTGT
TATGGAGAATccatatattttattttcatcaccAACTAACGGTTTTGATG
TTTTACGAATCTGGATAGAGATAAAAGGTTGAGCTTATTCCAGTTTTGAA
ACCTTATCCTAGATTTAGATAATGTACTTATGCAGCTTTACATAATTTGG
ATACGTTTTAATTATATGATATTTATACTAGTTTTACAACCAACCTGTAA
ATTCCAACTGCCTGTCAATCATAGAACCTTCAATAGCTTCCAGCACCACA
GTTGCAGCAACGAAAACAGATCTCCCATCACCATCAAATGATACAACATC
AAGTGAACCGATATCCAAGCTTACCACAACTGAATCTAAACTCAatacag
gtcaacaaagtaaTTTTGAAATGAATGCAGTTAAAAAACAAGAATCTCCA
CGTTTTAAACCAAAAACGCAAGATCATGAAGAAGCTGTTTTAACCAATAC
CTCAAACATGACCAACACAGAAAGTAAAAACATTTGTGAATGGGATGGTA
AAGAGATTCAGAATCGAACTTTGGTTGGTGGAATCAACTCTGGTGATTTC
AGAGAACATACCCAAGCAACTACTATGAAAGAATGTATGGGCCAATGTTG
CAAAGAGGAAGATTGTGATCTTAGTTTCATGATTGATAAGGATTGCTATA
CAGTGAAATGCTCCAGAAGTGATTTATGTCAAACCAGGAAAGCTAAAGCA
ACTTCTTTCATACCAAGAATCGCTtacaagaaaaaatcaaatgttgTAGA
GAGTAAGTTTTGAAATCTCTAATATCATTTTTGAAGCGAATATTTAgcaa
tgaatttttttccatgTTCCTCAAAAAGAGAGTAAATTTATAAGAAGCAT
CAATATGTTGTGGAGACTCAGTTGTTGTAAAACCCCCTAATAACATTTTA
TTGGAGAGAATATCCAGCAATGGATTTTCTTCCATACTTTTTTTATAGAG
TGCGAATTTAGAAATAACTATCAATAAATAAACTTAGTGTAAGGAAGTGT
GAGAATTATGCAAATTTGCTCCCAAATTTTGCTGAACCAATCACTCTTCT
GGTATAAACCCCTCCTAATATTCAAAAAGATTCAAACCATATCAAACCAT
CATTTATTACACTAAATCATTCCTTCGTTGACATTCGCACATTTTCATAC
CATATAATACCACGTCATATACCAATCATTTATCGAAATGTCAGATGTAC
TTACCATCTCAGTAAATCAATAATGACCATACATTCCGAACAACACAATT
TTTCACACATATTATCATGACCACACAGTAAAAAAtgtttattcattcat
tcagtcACCAATTTTATCACAATATCAAATGTACTTACCATCCCAGCAAA
CCATCACAATAAAGTAATTTCATCCATTCATTCCATCAAATCCttattca
ttcattcagtcAGCAAATCTATCGAAATGTCAAAACGTTGATGATCACAC
AGTAAAAACCACacaataatataataattttcattcatccaGTCCATGAA
ATCAAGTCATTCATTATTCCATATGGGTTTCATATTTATTCATTCAATCA
gcaattttattgaaatgtaGATGTACTTACCATCTCAGTAAACCATTCAT
GACCATTCAGTCAAAATCACACAATAAAGTAATGTTCATCCATTCATCCC
AACAAATCCatattcattcattcgttcagCAACTTTATCGAAATATCAAT
GCACCTAACATCTTAGCAAAATACagccaaaatcaattttcgtcCATTCA
TTCCATCCAATCAAATCCATATCCTATCTATTCATTCAGTCAATATTCAT
CCACACTCGCCACAACTCTCAAATCCTTCACCAGTACCCTGACTGCTGAC
CAATCACAACAAACAATAAATTCAACATTGCAGCAATTGAATTACACAAA
TCCCTCCAAAAACATGTACTTTTCACTAAAACACCATACTGGCTAACAAT
GATTTGGTCTAGCTAACATTACAGTGACACATCCATCATCAAGCAAAACA
CATTGCCATCACCAAGACTAATAAATGCATCACTTCTGCACTCTATagtt
taaacaaaaaacttttcaacctacatataacgtccaaataacgtcaATCT
AACATCCAATACAGCCCAATAATGTTGAATATTGTAATACCAACAATGGC
TCCAATGAAACACCAATAATTAATAGCATCACATCACGAATTCTCTGACA
GTAAATAAGACACAATCATGCATCAACATCCACCAGTCAATCTCATTACT
ACCAACACGACATATCATAAAATCTGACCCACCATCTATTAATAAGATAC
AATTATTTTTAGACTTATACCAGATTAGAAGTAGTAGAAAGAAGGCCATT
AGAACTTAACATTAGTGACAAAACATTACctaaagggaactaattttagc
gagaactaattttggcgaatggcaGGGTAATTTGGTTATTTTTGCCTTAG
AAAAGGCGTTTTAACACCCACTTCTCACAGTTAGGGTAAAAATAATGAAC
CAacactcgatggggattgatattcttatatttttatggcttgggACTTT
GGacattgttttcgagccagagAATTCAGTGGAGATAatagaaaaaatag
cacaatatttttcagtgaggatttgcttatctgactATTTTCAGTGGGAT
TAGAGTTAGAATCTGTACAAACCAGGCTGTAGTGTTTATTATCACAATGT
ACACAATATATTTTTACGCTAAGAAGGTTAATTCGTTCTCCTCACTCTGA
TTAACAATTTTTCCAACCTCCTGACTTATCTTCATCGTGTTTTTATCAGA
agaaatgacgtaatcttgacttaaaCATACAATACATAAAACCATCCATC
ACCTTTGTCATCCATTCATTCAatcatttattcattcatttcatTCCACA
AACGAACAGGTGTCAGTGAAGCTCTTGATTTTGTCAAAGACACTGTGGCA
GAACTGACTTTCGATCAAGATAGAGTTATTCGGCCTCTAAAGGCCCTTTA
TAAGGGTTTGGGCGACATCAACGAGCCGACGTCCCCAGTGACAAAATATG
TTATTAAATCAACACATAATGTGGCTGGAAATTCCAGAACATCAGACACT
GATCATGATCTAGAATCTGATCCGTTCGATCGTaagttcattcattcatc
cattcgtacattcattcatttattcattcCTTCCACCCAAGTATCCGATT
ATTCATTCATTAGTTTGTTAATTCATTTATTCATTAAtccaaattattta
tttttcattcatttttcattcattcattttccatttttcattcgttttcc
attcattcattcattcattcattcattcgttcattcgttcattcattcat
tcatttatacATTCAACGAAGAGATGGCAAGGGGAAGGAAGAGGGAGGCT
TTCCGAGACAAATGTGTTCAATCAATTCAATTTGTTCCCGCTCTTACCTA
GAActcttgatatttttttcagacttgAACGAGAAAGAGAACGAAAAGAT
GGAGATCAGCAATAATTCAACATCCCTCTCGTCATCAAATACAACAAAAG
GAGACGCAAAATCATCAGAAGCAAGTCTCGCTACACCAGTTCTCGGTGAG
TAATTTGTATCTTAGCCAGTAACTAGCTAACCTGTATTAGGCGTCTATAG
CTTTTTATTGTATAGCAGATGAATGAGTGAAAAATTCGGTTTGCTGGTCT
CAGTCTAGTCAGTATCTGATCTCTAAAGcttgttttaaagaaagaaaggt
tttaatttttaaaatttgaagccATTCTATCATAATACattcgccgtgtc
aattcaagacagacttaagtccattttttcgaaaattgacttaaaaccAT
AACCCCTTATTTCAGCATGCACGCTTTCCAAAAACGGCCTTAAGTCCACA
GAATTCTAATGGGAAAGaggtgtattttgcaattcaaaaaaaataagaat
ttcaaatgttccataatatatcaaccataaacagccttaagtcctaaatt
taagtgcaaattttatttcctatgaagcattgacatgaaatgtgtagcct
taagtccaacacatctcaacctttaaagtcaattatctcaaaatggaaaa
aatggacttaaggctgtcttgaattgacacggcgtaTTGTACTCTAATgc
aaaaactttaaactttactGAATGCGAGGATGATggagttttttcaattt
ttcttcaatcttcagcTGAACCCAAAAAGCATTCCTGCAACGCCGGTAAA
ATCATATACAACGCTACCCTGAGATTAGGTATGCACTCCGGGATGTTCAC
GAAGCTCGGGCGCGTGAACAGCATGGACGACTGTATAGAACGATGTTGCA
AATCATCCAATGCAGACGTAGCTTATAAACTAGGCTCTTTTTGTTTTGCT
GTCAAATGCAAGACAAGGGAAATGTGCAAACCTTCGCCGACGATGTTTTC
TGATATCACAAGTTTGAATTTGAATCCAGCTATCTCGTTTTTGAATCAAG
ATAAAATGCCATTATCAGTTGTAGGTAAGTGGTGTAATTTTTTTGCAAGA
CTTGCAGACGTCATTTTAACCACGAATTTGGTATACTTTTTCACTGTTCA
TGTGACTCTTACAACTATTTCAGTATATGACCACCAACATGTCAGTTAAA
TTTGAAAACACACTCAAATCGACAGGTCAGAATCATACATTTAGGGGGCC
ATACTCCAGAGCTCTTTCATGTTACTGATATCTTAAAATTATAACTGTCC
CATGGTGGTTACGTAGTAGTGGCGGATCTAAGGATTAAAGTGACGGAGAG
TGTTTCAAATCAAGACTCTCCGCCGTAAATTTTGACCCCCTTTACCACTG
CATAGGGTTGCATTCAATATGGTTCATTCATTGATCAAAGTATACCGCAT
TCTTTACAGCACTGCACTATTCATAGCATATAATATACACTTATTATTGG
TTTGGTGCATTTCCCTAACATACATTCAATTCACCtcaattcgaacctct
ataattcgaacgaAAAGTTTGGTCGCTTTCGATTTGAAGGTcgtaaaata
ctcaaaaattcaaatctttctacgAAACGTCCTAATCTTTGAAGAAGAGA
CTCTAGTAACCCAGTAAGTACATCAAGTCTCTAGTAAGTACATTAACGAC
CTATCTTACCTTTTCATAGCGTACACCTATTATAATTATCATATATTACA
TTTTCATACTATTCATTTGACACTATTACTCATATATTACATTTTCATAC
TATTCATTTGACACTATTACTCATATATTACATTTTCAGATGAGACAGAC
AAAGACATATTAGGTTCAATGTATTCCACTGCGCTTGATACAGATGACCT
CATAAATATTGTCATTCGTAACTTAACACATCAAGTCCGCCCCACTGCAT
CCGCCAAACGCCATAAAAGCCACCCTCATTCACAATCATCCGTAACATCA
AATTCCATACAACATAATACCATAACATCAAATTCCATACAGCATGATAT
TATATCTTCTGAACAACAAGTTGACGATGATATTATAACTGAAGGTTACT
GGGATGCTGGTAAGCATAGTTTATGAGGCTTTCGAATTCCCCAAATTTTT
CCTTACAAACAAATCTGTGTCACAGACACAGTTCCAACAGATAAATCAAC
TAGAAACTTCTTTGTGAGAAAGTACTCTAAAATTCCTTTCCATTAAAGAA
GTACACTTAGCTCTCAATTTTACTGGGCAGGCACCATAGCTTTGAAGGTC
CCCTATGGGAATTTTGAACCGAGAAGGATAGAGTTTGAAACATCTACCCT
CCCTTAACCCCTCTTGACATTATCTTAGGAATTTCTAGACGGTTATTTAT
TAATACTGGGGTGTTTACAAAATTAATATATGTAATCTACAgggtgcaat
taacgattaattgctctctttgaaggggcgccaaaaaagaaaaaataact
catcgtgcgattaataCATTTAATCTcgatttctttctttgattattttg
gactttctctcctttccacacgtcttttaaagaacaatttcataagaata
tgaGGCTCGATATCAGTGAAAACCTtagaacaacttaagaacaaTCTCAG
CCTCAGTTTTCAGGAATGGCTAAGGAAAGCTGATTTTGAGCCACTTTTAA
GTTTATaagtgaataaaaaaacatattgagaacatcttaagaacattcaa
gcctggaaatcatgaaaaaaatagaGCAGCTAAGCCTCGGCCAAAATGTA
CTGgttttataagaagaaaaaaCGTGCAACGTGCAAGGGTTTTACGCCGT
TTGGTGAAAGTCATATTCTGGTATGTACTGTGTGTGCTGTTACTTTCTGG
TCTTTTCTGTCCATCGCATCGTGATCTTTATAAATTGCAAAGGCTTTTCG
ATAAGCTGGTAAtagaaaaactgttttaaagGGCGTTTTTTTCTTCACAC
CTTACACAAAGCGTCAAAGCAAAGTCCATAATGCATTCATAACACGTTAG
ATGAAGATTGTTGGGTGCTTGCTGGATCCTTTCTCCTTACTGATGCTGAA
AATCCCTTCGGGGCTCGAAGAGGTCATTCAAAGGCTCCTTGCCCATGCAA
ATTTGTCTGCCGAGAAAAATTATAACTAGTTTTTTAGATGTTTTTGTGTA
AGATGCCCTTTATCAGAATCAAAATAAACTTGATTCCAACCAATTATAcg
atattgaatatttttttaggttcAAATGAAGGAACATGTTCTGACAGTCC
AATCACTTATAATGTGACTCTTAGAGGTGGAATACACGCAGGTAAAGTCA
AAGTTTGACATCTCTACACGATTTTTTAATGTTGTAGCCTATCCTGTATC
TTAATAatgtttttagcctaaaaatggTTCTTAAAGttcttttttcagca
ttttgtgGATTATTTTGTCATTATTCTCTTTTGTTATTAGATTAGAAACT
ACCGAACTGAAATCAGCTTGTACGTTCTCGAACAGCTCACAATTTCTATG
CGAGACCAATTAGGTTAGCTGGTCTCCTGGCCCGACCCTAAAATCTAAGA
AAGCCAAATAAAAATGTCtacatcaaaaatttgaaacttttcagGTAAAT
TTACTCAACTTGGACGTGGTATTGACATGAGAAGTTGTGTAGGGCGTTGC
TGTAATACGCCCTTATGTGATGTGGCGTTTATGTTCTCTGATAAATGTTA
TGCGGTTGGATGTTTCAATGAGGCAGATTGTCAAGCCGTTGTCGCGAAGC
CGTCTGCATTGAGCCCTAAATTGGCGTACATTTCGAAAAACCGTGGATCA
TCACAGCCGGCTATCACGGACGGTTCGTTCAGTTTTTATTCTTAATTTAC
GAAATTTTTCATTGTTCTATTAAAATGACTTTAAGCTAGGCAAGAAATTC
CCGTAATTTGACCGTTAAAGAGACCTGTGGAAACTTTCTCGAGTTATTCC
ATTTGACAAATGGCAGAAGGTTTGTGGCAGACTTTGTATTTAGGCTTTCA
TGGTTAGGTTTTCGTGTTGGTTGGACTCATTACAGGCCATTGACAGAAga
atgaattttctattttcatcTGTCTTTGTAGGCATCGAGTTTAAAGTACA
ATCAGAGGGAGTATGCAGTATCAATAAAGTGAAACATGGTCCAGTCTACA
AAAACAAAACGCTTATTGGTGGTATGAAAGCTGGCAATTTCTCTTATCTC
GGCAAAGCAAAGTAAGTACATCTTGTTTCGTTGCAAATTAGAGGGGGTTA
AGATTTGTAACTGAGCGTttcttttgtaaactttttccTCGCCACGATGT
CATGTTGAAAAAACTTCAGCACAAATCGTGATAACTCCACGTTTCAACGG
ATGATTggaaaaagcaacaaaaatagCAAAGTTAAAACTTGTTGGGCGGG
AGTTTTTGATTATTCCAAATGACATCGTGATTATtaggaaaaggtctatt
cgtaTTACTTGTGAAGAATTTTTCTCCATGCTCagaactaaagtctgttc
acgataagtgtgcactcttttttcttttagctataacttttgaaagaatt
cttcaatctttataaatttggtatcgttggagagatatttgcgagtggaa
caatttcaaataaaaaaatcttcaaaagaattctaaaaatgaagatgaaa
atgaagaagaaaaaaatgaagatcttgtagaaaagtgctacaactttcat
ttttactggagagattctttgatctttggaggtcatcactgtaaaaaaat
ttcactacaatatttattcaatacaaagttatgatacaaagttaataagt
gattgaccccaaaaaacagcagaaaacagcagaaaacagcgtttttgaac
gtcaattagcttataactttgtttgatatcttttgactgaatgattattt
ttgagaagttttttcacagtgatgacgttcgataatcaaaGTTTCACTTC
ANAAGTtataagtaaatgaaaaaagagtgcacacttatcgtgagcTAGTC
TGTTAATCCCCTGTTGATAATCATGTCAGAGGTGGAAAACACGGCGAGCG
TTTGTTAAAAATgtagctgcgtaggagaacaaGCAAAAGTTGGTAAGAGG
CTGTCGATTAACTTTCAGCCCTTACCGCTGACAAATTTTCTTCCTACGAT
ACCGTAGGAAGTTGTCCCTTAAACACTCCTGTATGAGTACCTAATATTGA
AGCCCTATCATGGGTAAACAATGCATTAGTTCCTCTCACCAATTTTGATA
TCCGTTTTCTAATCTTTCTCCCCGGGGTAGACAAAGGGAACATATTCAGG
GGTGGTTATAGAATGGTTTGTGTAACTTGGCTTGATTTTAACCTTCCCTT
CTCTTTGAATTTACCGGGATTAGAGTTTAATCATATTGTTAACGGTTTTC
TTTCGGTCTTATAGCTTATAGTTAACCGTTAAAAAACCGTTTccgtgata
ttttttttcagtgacaTCACACAATGTCTCAGTAAATGTTGTTCGTCTGG
TGGATGCGATTTAGCGTATTTGGTGAATCGTGATCAATGTTTTTCAGTCA
ACTGTTTCACACCAGAGCTGTGTCAAGTCACTGATAAACTATTTCATAAC
CGTGATATCGAGATTGCGAAATTAATCAAACCCAAACACAGACATCAAAT
CAGTAGAGGTAagaaaacgtcaaaacaacgtccatctaacgtctGGAACA
TCCATAAAACGTCAGATGGACGTTGGAAATCGTGGTATTCAGTTAGGAGT
ttaactactctcgggtacctaatagccggggagTTTggataagcgggggg
gttggaaaaaatctcaaataatAAGCAGGGggagttggaataaaaatgtc
ctgggtggaaaatttttgaaaaggaggctaatacagcagaattaggacaa
aagagggaactttcaaaaacattttcccaaaaattaataagcgggggggg
ggggggggggggtgggggttggaataagaatgccctggggggaaaatttt
cgaaaaattaattagggggggggggggggtttggggTGGGAAAAAAAATG
Ccctggggggaaaattttcgaaaaattaattagggggggggggggggttt
ggggttggaataagaatgccctgggtggaaaattttcgaaaaattaatta
gcggggggggacggctattaggtacccaagagtattGTCCGTTAGTTTGG
ATGTTTCATAGCCGCCGCCTAGACAATTAAATAACCATCTGTATGAACGA
TGCTTAAGACTAGTCTTCCCTGAAGAAAATTGAGTTTTGAAGAACTTTTC
GAGAAAGGTAAGTCAGTAAGTTTCCATCATCGCAATATTCAGCTTCTGGT
AACAGAACTATTAAGATGCAAATCAAACATTTCAAAGCTAAACGATGGAA
TATTTGTTCATAATGAAAAGTCTACGAACACACGAcatcaaatgtttttc
aaaccTAGAAACATTAGAACAGTGTTCCATGGTGAGGAATCTCTATCTTA
TCAAGGCCCAAAAATATGGAAATTATTTCCCCAAGAACTTCGACATCTTA
ATGACCCTAAAGAATTTAAAGACAAAATTAAGCATTGGAAACCAACGCTA
TGTCCCTGTAGAATATTCATTTAAGAACATAAAAAAGTagctatttgttt
tttttatgtcaACAATAATTAACAATTACCAGCAAACAAACAAACGAACA
ATGTATTTAATTTTAGGTCTTTTAGCAGCTTATTTCGCCATTGGATTGCT
GGGTGCTGTGGTTGGAGTGGCTGGATTTCTTTGGGCTGCTCTTATCTTCG
TCAAAAGGTTTGCATCcagtgaaatagctattttttaaccttttaaaAAT
CAAACTCTTCTGTTGCTTTAATAGGGATAGTGATTACAAATTACGGAAAT
CTCATAAATAATAAAGGTCTTCTTCTTGGGGATGCATTCACTGACCAAAT
AATCTCTTTATAAAGCTCAGTGATGCAGAAAAGGGGTTAATCACTCCCCA
AAAAGGACAAGTTTTTTTTCGTGATTTAGGGAATTTTGGggatttttgcg
gttttttatATTTAGGATTTTTTGGGGATTTTTGGAAGGTGTAGAGCTTT
TTTAGCATGTCGAAATATTACAAATTTGGTTAAAGCCTTTCctacttttt
ttcaataataatactttttcattttcaggaatGAAGTGAAAAAGAAGAAC
ATAGCGGCACGAACGAGAAAAGAAGATGACGAACAGAAACCCGAAAGATG
AACGGaaacattttgacaaaaaatctcttttggtgGTGCTGTATGgtttg
tttgtttacaaattaaCCCCAATCTGACCTCACTGCCAATGTTTTTCCAG
TACTTATTTGATgtatttgaaaatatacttGGGCCTCGATTGTGTTAACA
GTCAAGaactattgcaaactaggataAATGCGAGTATTTAGCCTAAAAAG
GATAAAttatcctaactaggataaaacctatatcctaattaggataaaag
gaagaaaaacttgatttattGAATAAACTTTGAGATCCGCATCGAGATTT
GCATGAATTTGAGTAATTTCGAACCAGCAAAGTATGCTTGTGAAGTCTCA
TCTCCCAGTCAGCGTGCGTTCAgaagttattcaattttcaagaagTACTT
TACAAACTCCAAATGTTAAGCATCAAACTTTCTTGGTGATAACTTTGCTT
ATGATGNTTTCAAGAAGTACTTTACAAACTCCAAATGTTAAGCATCAAAC
TTTCTTGGTGATAAATTTGCTTATGatgattgtttttttaaagaaaatct
tcaaatagaTACTATTAAGATATAACACCAGCGTTATTTacaattttatt
tattattttatgaCGGGAAAAGCGCGTAACACATAAAAATATCATGTACT
ATTCGTCCTAATTAAGCTATTTTATCTTAGTTAGGATAAgtgttttatat
tttcttactcCGCACTAATAGGAAGTTCATATTTGGTTAAAGTTAATGTT
CTTTATCTGCATAATTGATTAAAAGAGTAAAGAAGACGATAAATTATCTT
ATCTAGGATAAATATTCTAGCCTATTTAGGATAAAAGCCTAACTAGGATA
ATTtatcctagtttgcaatagtacTTGACTGGTTAAGGGTGTTCAATCTT
AAGTAGAGACAAAATGcgcacaaaatggtgaaaggAACACGAGgaacatg
ttaaaaatatttctaggcttgaaactaaaaaaaattaagaacacctgaaa
gcttataaaaaacgtgtattcatgatatgcaccattgcaatgtcttccat
tccacccaatagctgattggttgtaagtgatgtattgactgattttacgt
cacttacaaccaatgagcgattggttccgtgatgtaatATCATGAATGAC
GATTAGTCATGTTTTTTCATTACGTAATCAGGGTTGGTTGACGTATAAAG
ATGGCTAACGTTGACCTTCGAATGACGTAAGCATATTAGATAACGGACGA
AATGAACTTTTGAGAATTCCTGAAACAGTAACGAAATACGCCTCCAATGA
AGATTTTCAAATAACGTTGACGAAAACTGTGGAAAAAGACCATGTTGGAT
AAAAACGCTGTATAATATAAATGACTTGACTTTCGGTGCCGTAGAGTTTG
AGCGTTTTAACGTAATTAGATGGTCATAAAATGACGAAGGGACAGATCGA
TTATTAGATACAGCCCTGAATAAGTCATTATGATTATTGACAATGTAGAT
AGAAATGACAATGTAAAAAGAATATTACACAGACCCGAATTGATGTATAA
TTGACATGGATAGCGATTCGTTTGAACTTGGACTTGCTGTCTTtataatg
atattttttttgttttttgacgaagattttattttctgatagctaattat
ttttgtttagatTATTATATTACTTGTTTAGTCCTCTTTTCACTGAAATT
TATTCTTCGCATGTTTGGATCTCCTGAAAATTGGGTGCCCGGTATGTGTG
AGCCGTCCTTCAaaagggtacaaaaaccattaaaaagcaaattgtcTGTA
GGGGttagaaaattatgaaaataaaaaatcgaccccctcaaagggtcata
aattcgtGAAATTTTGACTATAATTTGAAGATGTTGGCTGAAATTTGGGG
Aaatgtctctctaagggtggctaaaacgtttaaaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011303XLOC_011303Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020123-exon-sc0000349-1491911889:291697..291749TCONS_00020123-exon-sc0000349-1491911889:291697..291749Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:291697..291749TCONS_00020123-exon-sc0000349-1510915933:291697..291749Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:291697..291749TCONS_00020123-exon-sc0000349-1575043694:291697..291749Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:292421..292948TCONS_00020123-exon-sc0000349-1491911889:292421..292948Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:292421..292948TCONS_00020123-exon-sc0000349-1510915933:292421..292948Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:292421..292948TCONS_00020123-exon-sc0000349-1575043694:292421..292948Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:295669..295791TCONS_00020123-exon-sc0000349-1491911889:295669..295791Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:295669..295791TCONS_00020123-exon-sc0000349-1510915933:295669..295791Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:295669..295791TCONS_00020123-exon-sc0000349-1575043694:295669..295791Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:296412..296720TCONS_00020123-exon-sc0000349-1491911889:296412..296720Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:296412..296720TCONS_00020123-exon-sc0000349-1510915933:296412..296720Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:296412..296720TCONS_00020123-exon-sc0000349-1575043694:296412..296720Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:297486..297755TCONS_00020123-exon-sc0000349-1491911889:297486..297755Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:297486..297755TCONS_00020123-exon-sc0000349-1510915933:297486..297755Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:297486..297755TCONS_00020123-exon-sc0000349-1575043694:297486..297755Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:298916..298987TCONS_00020123-exon-sc0000349-1491911889:298916..298987Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:298916..298987TCONS_00020123-exon-sc0000349-1510915933:298916..298987Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:298916..298987TCONS_00020123-exon-sc0000349-1575043694:298916..298987Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:299291..299518TCONS_00020123-exon-sc0000349-1491911889:299291..299518Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:299291..299518TCONS_00020123-exon-sc0000349-1510915933:299291..299518Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:299291..299518TCONS_00020123-exon-sc0000349-1575043694:299291..299518Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:299778..299907TCONS_00020123-exon-sc0000349-1491911889:299778..299907Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:299778..299907TCONS_00020123-exon-sc0000349-1510915933:299778..299907Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:299778..299907TCONS_00020123-exon-sc0000349-1575043694:299778..299907Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:301158..301354TCONS_00020123-exon-sc0000349-1491911889:301158..301354Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:301158..301354TCONS_00020123-exon-sc0000349-1510915933:301158..301354Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:301158..301354TCONS_00020123-exon-sc0000349-1575043694:301158..301354Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:302413..302503TCONS_00020123-exon-sc0000349-1491911889:302413..302503Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:302413..302503TCONS_00020123-exon-sc0000349-1510915933:302413..302503Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:302413..302503TCONS_00020123-exon-sc0000349-1575043694:302413..302503Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:302875..302991TCONS_00020123-exon-sc0000349-1491911889:302875..302991Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:302875..302991TCONS_00020123-exon-sc0000349-1510915933:302875..302991Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:302875..302991TCONS_00020123-exon-sc0000349-1575043694:302875..302991Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1491911889:304128..304884TCONS_00020123-exon-sc0000349-1491911889:304128..304884Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1510915933:304128..304884TCONS_00020123-exon-sc0000349-1510915933:304128..304884Clytia hemisphaericaexon
TCONS_00020123-exon-sc0000349-1575043694:304128..304884TCONS_00020123-exon-sc0000349-1575043694:304128..304884Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000349supercontigsc0000349:291697..304884 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.20188	1.38967e-05	0	0.0797186	0	0	1.66101e-05	0.0274535	2.42177e-07	0.0096625	0.19239	0.36142	1.51956e-06	0.241837	0.634017	0.751227	0.14268	0.11977	0.536481	0.443422	0.000645439	0.00908196	0.0105737	0.0521636	0.0247917	0.0506552	0.365437	0.716472	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020123 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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