TCONS_00020002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020002
Unique NameTCONS_00020002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length967

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020002 ID=TCONS_00020002|Name=TCONS_00020002|organism=Clytia hemisphaerica|type=transcript|length=967bp
cacataccttaagttatcaagctgcatgaattcttcaagaTTTGTCAAAT
CAAACATTGAATAGATATTCAAGAGACCTGGACACTATAGAAGACATTGA
TGCAAAAGGCCCTTTGTTTGTGTATGGTCTGCCGGCAACATTGTTTATCC
TTGTTCTACTCATTCTCTTTCTATTCTACTTATTATGTTGTTGTGACAGA
CGGAGAGACATGAAGGTGAAAAGAACATCAAACACgactaaaaattcaaa
atccaaaagTCATGAAATTGACATACCGTATGATATACAAAACCAAGACC
GGAATCAATCAACCCAGCTACTCTACACTCCAGAGCTCCCGAGTCACCAG
AGCAAACTTCAAAAAGACGGCAAGAATAAAGCATCCAATTGGTCTCTTTA
CTTAGATGCCGGACGAAGAAGTTTAAGTCGGGCATCCTCCCGAACAAGTG
GTTTGGCATACTATTCAGATGACCCGGTAAAAGGGACAGATGGCGAGGTT
GCGGTATTTGTGGAAAGTGGAAATCTAACACACCTCCATGTCAAACAATC
TTCGTTACAGCCAATAAGAAGAGAGAATTCTTTTAATCCATAACATAACT
TTTGGTGCGACCCTATAAAAGACTTTGGATTTAATTCaaactagactagt
aaaccacgtcgttgtatttcgctgcagcttAAGCTTGCAATGGGCTCTGT
GTctatgttcactgaatacaatgtctttccaaaccactctcccgcggAAA
TTTctattcttttataagaactctttatatAAGCACTATctgcgttcctg
tgtccaaggaaagacagacgcttgctagtctaaaCTCAAACCTGTATAAC
TCGAATATTattttaactcgaacaatttttaTGGTCCCTTCGCTTAATAA
TACTTAATaaatcttactccataactcgaaatttccataactcgaacaga
GTTTTGTGTTCCCCGGG
Run BLAST on NCBI

protein sequence of TCONS_00020002-protein

>TCONS_00020002-protein ID=TCONS_00020002-protein|Name=TCONS_00020002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=127bp
MKVKRTSNTTKNSKSKSHEIDIPYDIQNQDRNQSTQLLYTPELPSHQSKL
QKDGKNKASNWSLYLDAGRRSLSRASSRTSGLAYYSDDPVKGTDGEVAVF
VESGNLTHLHVKQSSLQPIRRENSFNP
Run BLAST on NCBI

transcript from alignment at sc0000345:242626..256327-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020002 ID=TCONS_00020002|Name=TCONS_00020002|organism=Clytia hemisphaerica|type=transcript|length=13702bp|location=Sequence derived from alignment at sc0000345:242626..256327- (Clytia hemisphaerica)
CACATACCTTAAGTTATCAAGCTGCATGAATTCTTCAAGTATGTATTTTT
TTATAATGGAATATAATTTTTTTTTTCAAGCAAACGCCTCAATCAATCAA
TAATTAAATCAATCATTTATTCCTGATTATTTTTTAATGTTTATTATTTA
AAGCATTAAAGCTTTATAAGTGCATGACATGATCTTTATGTGGGGGCATT
TAGTGAAAGCTATGACTAGTTTAATAGGTATAAGTTTTGTTCATTATGTA
GAAGCTTACAGCTTATTTTATTTTATTTCAATATTTTTATTAACCTATGC
TACGTTTTTAGGTGTTGAATCTATCTAAAATACTTTCATTTTCTGCAAAA
TTTTAACCTTTAGACGCCGAGAGACGTACCACGTACGTCGTATATANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGAGGCGTCTTTTTGGTATTATCTGAAATAAT
AGATCCTTAGCTTTTCAAAATGGGTTTACTTTTTACTTAAGCTTTAGCGG
TTCAGATTTTATGACATTTTCTGCGAAACCTCCATTTTAGTGAAAAAAAC
AGCGGCAGCAGCGCGCACTGTTTTTAAAAACAGCGGTGTCTAAAGGTTAA
ATCATTTTAGTTAAAATCTTCAAGCGCGACTTAACCTAATTCGTCAATAA
ATAAAATAAAGATACATTTACATTGTGTCAATCTTTTAATAAGTCGATAA
ATACGCAATGTGTAAACAAATCTTTTGAAGCCAAATACACAAATCTTTCA
GTCTGAGGACAAATATAAATGTAAAGTTTTGTATCAATTTTTTTTGTATA
GATTTTTTGATGTGAATGAAAGGTACGCCTGGTTCTTGTACACTAGCTTA
TAGTTTAGAAAAGTTGAACTAAGGAAAATAAGAAAATCCTCCAAATAATG
GTAAGGAAAATACTTTTATTATCAAATCTATTTTGGACTTAGGATTATGT
AGGATTGTGTCGTTTGGAAAGAAATCATATTGAATCATAAACCTGATCCT
TTTTTGTCTTTCTAAGCACCCAGCTGACACACAAAGATTTTTCCTTCAAG
TTTTTTTCTAAAATTTGCTTTCTGCGAAAAGACTTTATAGCGATCAAATT
ATACTTAGAACGAGACCGGGAGGTAAATGACCTACCGTGTGTGCGGCCCT
TAAGGGTCCCTTTCCCGTTTTTCCCAAGCCTCTCAAAGTGCACTCTAAGG
GTCGAAATGAGCAAAGATTAGAAAAACTGCATTCTAAGAGTGTAAAATTT
GAAAAATCTGACCATACTTTGCCTGAAAATAGTCAAAAACTCTCAAGAAA
ATAATTAGATTTCCCTTTGATTTGTTGAGAGCGAAAATTTTGCTAGGACA
GCAATACAGAAAAATATCATACGATACGGCGAGCTTTAATTGGATTTATC
AGAAAAATATTCAATTTTGGTCGTAAAAAAAATCGACGATTTTTCCTTTA
TCTGACAAGGAACAATAAAACGAATATCCAGTGAAAACTTCAGAGCTCTA
CTCCTTCTTAATCGGGAATTGTTCCAATTACGCCATTGTTTGACCGGCGA
ATCAAATATATTTAGATTAGTGTCATGCCTTGCCTTGCCTTGATTCATCC
GTGTGGTGAAGCATCGACAAAGTCTTTTTTCCACTTTTGACGATATGACA
TGACTGTTAGCAAATCTTTACCGGCAAGACCAGTTTCCTCTTCAATAATC
AATTTGAGGGTGACATAGGGGCGACCGACACGTCTTGGGGCATCTGGAAG
CCATGTTATCAATTTTCCGGATGGTTCGTTATGTCTTGAGACATGACCTG
CAAGTTTGAGTCGCCGTTGGCGTACAACCGATGTGCTACGGTGAAGATTG
CCGTAAATTTGTTGGATCGTAGCATGTTGTTGCCAAGAAATATTGTATAT
ACGCCTTAGCATTTTAGTATAAACTCCATCAAGTCGTTTACTTCGTTTGA
CATTGAGACACCAGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGCTTTCCAAACATTAGATAGGGAATGCAGGGCGCTCCAAGCTTGAGCGA
TACGTACTTCCATGTCGTGGTTGGTGTCAGTGAAGCTCCCGAGATATTTA
AAATCGTCGACTCGTTCAATTTTGGATCCATCAGAGGAGTTTAATTGTGT
GTTCGAAGAGGGATTGATATGCATGTATTTTGTTTTAGGTGCATTCCGAA
AGAGACCAACGTCTTGACAGGCTTTTTTAACAGCTGTTAAGGTGGGAGTC
ACATGAAAAATTGAGAAAGTTGATTTTTTACATTTTCCTGTATAACTTTT
GAACTTGAAGAGATTTTTAAATGAAATTTTCTACAGAGGTAACTTGACAA
TAGATGATTTCAAAAATGTCTAAAAATAGCCAAGACGGGGGTAAAACCAA
CCAGGGGGTAATGTACTGTAAAAATATTGTGTCAACGTTTTAGAAAAATC
TACAAAACCTATCACAAAAATTTTTTTTGCAGCTTGTTAATATTTGGATA
AGGAGTGTTATGAATGGAATTTTTTTTTGAAATTTCATTCCAGGGGGTCT
GGAAACTAGAAAATGCATTTTTTGAATTTAGAAATCAAAAAAGTATTTTT
TCAAAAATGTAATCCATTCATAACACTCTAGACCATAAATTGAATTTCTC
CTGAAAATTTCAAGTTCATAGCACTTGTCAATCCTGAGAAAACGTTGCCA
AGGTGTGCAAAAACCCCCTGAAACCTATTTTGAGAAAACGGTCCGTAAAG
TCAGAAGTAGATATATATCTCTATTTCTCTGTAATAAATCGACCGTTTTA
CAAAATTCTTTCGCTGTTTGACTAAAATGGACTATATTTCTACTTTATAT
ACTTTAAAAAAGGCTTTGAAATATCAAAATAGTCCAGAAATTCCAAATTA
TCACTTTTACGTGATGTGCGCCGATCCTTAAAATTTTGCGCCAAACTCCA
CGTCAACATTGATTTAAGTCAATTTAAATGTGTTTTCACAACAAAAACCA
TATTTTCAATGTAATAGATCAGCCTAGTATATTTTCCTCACTGATTCTGC
CAGTTATAGGTTAATCTAAAGTTGATCTGTTGTGATACAAGAATCCACTT
GGACATCTAGCCGTGCACGATTTCTTCGTGAATGTAAATAATCCAGCCAG
GCCAGAGCAGAGGGAGCGCCCCAGACCTTCAATAATTCATCACACACAAT
TGTTAAACCTTTAACACTTGGATCTTTAAATAGATACATCATTGAATATG
CCACGGCTATTCAGCGCAAGCTATTCCCGCGAAGCTTTAGATTTGGGCGC
TTTATGTAGGCGAGAGGGCGGGAGGAGCAAGCTTACGGGCGTAAATTAAC
ACCCTTCATTAAAATTGCTATTTTGAAGGGGTTTTAAGCTATAAAATACA
GGTTTTTCATTTTAACAGGCGAGTAGAACCTCTCTTTAGAACAAAATAAT
CAATATCATACCATTAAAACGCTTTTCTTTGCTAAAATCAGTCTTTGAGA
ACATGCCTTTCAAGCTTGCATGTCACCAAAATAATGGCTCTGATTCGAAA
AACGAATGAAGGTTGACGTCGAAGAAATATTTCATTGATTAGACTAAGGG
TTGATAATTCCCTTTTTAACAGTTTGCAAGTCATTGTCATTTTTTAAAAA
GGTGTATTCAGCCGAAGTAAACCACCTATTTCGGTAAATTTTTGCTTCGG
TTGTTTCTTCTTTTAGCGCCGCCATATTGAATCCACGGAAAACGAAACAT
TCGAATTGGTCCAAAACATTCGAAAATCCTAGTTCCAGTCGGCAAACCGC
GTTAAATTTGCGCGGGAAACAAAAAAAAACAAGCCAACTCGTGGCCTTGT
TGGCTTTAGAAGCTTCTTTTCTTATACAATTGTATGTTTCTTTTAATTCT
GAAACAACCTAATTAAAACCTGGAAGAAAAAATCTTCGAAATTCCATGCA
GCTACTTAGAACTGCTAATAAAAAGGTGAAAAGAGAGGGTTTACTTACAA
AATAAACAAGACATTTTGGCCAAGGTCTAATGTGTCATCATTTAAGATAT
ATAAAAAGTACGTTGACAAGACTTGCATTAGGTTTTAATTCATCTCTTGC
AAATATTTTCAGTCAGTTTAGGATTTAATAGGTGTACAATAATGACTGAT
TACATAAGGATATATAAGATAAAAAACAATCGAAAATAATCCACGATATT
AAATAACAAGAATATTTTTCTAAATATTATGCTAATTAGTGAAGCAAAAG
CTCATGGAAAGTTTAAGGCCTGGAGGGAGGGGGGTCCAAAAGTTCCAAAA
GCTTTCTAGGCTTTGATGGTCAAAGAAACCTACCTGTTAGCTGTAGAATT
CTCTACTTCAGGTTCTATTCCTTTGTAGAAGTAAAAAGCTTCATTATCAA
AAATGTTTGAAAAATTTTTTGGTTTACCAATATTATGAAAAGAGTTTCAA
GGGGGACTAATCCAGCTGATGCTAAGTAGTATATAAATTAAAAATCATTG
ATCAAATACTGTCAGTCCAGTCATCTTTCACACAAGGTACATACAACATT
CGCACCCTCGATGGGGGACTCTTCATTAAATGTAATGTTAATCGAATAAA
GTATAGACTTGGTCTAGAATGATGGATTGACTGAAAAGTGCAGGTTTAAA
TATAATTATGAAGTACAATTGTTCATCATATTATCAGATTATAATCGTGA
GAAAAGGTAAATTGAATACATTTCTCATCCATGATCAACATATGTAAATA
ACAAAGGTCAGGTAAGTTAATGTTCTAAAATGCCAAGAAATCTATTCATG
AAAGTCAACTACCACGTCATAAAGCCAACAACAGGAATTCTATTCTGCTG
TGTATGTCATTTCCCAACCCGTAATCATAACAACGTCTGCTTTGAAAATC
AGTATTCGGTTTGCAAGCGATAAATTGTACCTGAAAAAAAAGGATTGAAA
TTTATTATAGTCATATGAAAAATTGACAATTTAAAAATGAAATTGGACAA
AACATTGTTTGACAATTTAAAGGTTTTGTGAAAAAGTCGGTTGAAAAGGT
TACGGTACAAAATGTTTGTCCATTTTTTTAAATAAAACTTACTATATCTA
AGCCATTGCACGAACATTCAACAATGATTATTTGTATTGAGCAGAAGTCA
AGATGAACAATATGCAATATCAAGCCAATGGATTTCAACGCACAACGCGA
TTTTGTCCGAGCAATCTTGACAAACCATGCCAGTCAATTCCCTAAAATTG
GAATACAATATAATAATGATCGTGTTAAGTCTGTTATTGAAATATCCATC
AATCAGACAAGAAAATTGCCAAGTGCTTGTGGTACTCTGTAGCTAATCTA
GTCATTTTCACCCACAGTTACGCCCTGCGATATAAATCTCACTTTTGCAT
TTTACACATACCAACTAAGAGCTGAAGGTTGAATTGTTTTTACCTATTAA
GAATAGGGATGGCTGGCTCTACGTAGTAATGCTACAGATTGTAAGGAAAG
ACTTTCTTAATGTGGCACTATTATATATCGCGGGATACAAAAATAGTTGG
TAATGAAGCTTTAAATTAGCCTTTAAACTCTATATTATGATGAAGCTTGG
TTCTTAAATAGGGTTTGACAACAATAAAAGTAATTCATAGGCAGAAGCTA
GGTCTTAAACTTAAAGAATCACCTTTGAAAACCACTCACAAACAGCAGAA
GTGACATAATTCTGGCCCAAAATATAGTGCATCTTCGAATAGACATAGCT
TCACAGAAAAAAATGACAATGATGTAGAATTTTCACCTGCTGGTAGCATG
ATCTTTCTCCTTTCCAGAACATCCAAATCGATTCTCTAAAGCTTGGGCAT
TAAATTTCCATCAGCTTATCCCTAAAGCATACTTTGAAGGTGTCCTCAAA
CTATAGTCTAAAAAATTCCACATTGCTCGAAGTAGGATGCACTTTTCTGA
CTTCTGATTTTTGGTTTTTAACCTCCAGAGAATTTGGTTTCCAGAGGATT
CTTCTCCAAATTTCTCCGATTTTCAAAATTTTGGGTAATTCGAGGAACAA
GAATGAGCAAAAAAGATAAATTTTGAGGCCGCCAGCCGCCCGAACAAAAA
CACGCGATTTAAGGCCCCATCTACATTGCGCGATTCTCTAAGCTTCGCGC
TGTGAATAATAGCCGTGGCCTTTGGTCTTCGTCCTTCAATAAAAGTTTTT
TGGTGTCGTCAAACTATAAGTTCATATCGAAAACGTTGAGTTTGAGAATT
ACACCTTTCCCGTAATTCGTAAAACTAATGCGCGCGCATTATTTTGATGC
TCTCCACCGTTTGGTCTCTGGAGGTAAACAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGTT
CAGAAAGGGTATAGGGTCATAAAACGCGCAAAATCCCGAAATCGATAATT
TTTTCACCAAATCTCAAAACTTCATGTGACTCCCACCTTAACAACTTTTG
AGCAGCAATTATTTCGTCCTCGATTAAAGCGATATCGTCAGCGTAATCTA
AGTCAGAGAGACGTTCAGTTGGGTAGCGACGACTTTGACGACGTGCCATA
GGAAAACCTAATTCCCTGTTCATTACATAGATTTATGAAGCCTGAAGGGC
TAGATGTCGTACTTTTGTGCCGTGGTTAGGTAGGAAATCCGACCTGTCAC
GTGACATTACAATAGAATTTCAGCGCTTGACCATCCAGAAGCTTCGCGGG
TTTTCGAAAAGAATAACGACAATATCTTTTTCCATCTTCAATTTTTTTGC
CTGCGATGGCTTAAAGCACGACATCTAGCCCTTCGGGCTTTATAAATTTA
TGGTTCATTAGCCTATTTCATAGGATTCTTGCATCTGTTACATTTTTATT
CAATTTAAAGGGAAAAACCATTGAGTCTAAAGCACGAAGGACTAACCTTT
CCCAGGCAAGAAAAAGTGAAGCGACTTATTTCCCATTTAGAACGCGCCTA
AAACGTGCCGCAATCATGACGACGATTGTCCCTAGCGGTTCCTTTTTTTT
TCGAGGACTGCATTTTTCGGGCTTAGAAGTCAATGGAGAAAAAATGTATA
AGTCTGTAAAGAATTCCTTTGGAGAAATTGATTACTGTAATGACGTAGAA
AAATATTCTGTAATTAATAAAACACGAGTCCTATCATAGTCCGTATAAAA
TACCCTGGTCTGGAAGCCTTTTTTTTCTTTCCATTGTTTCTTACTTGAAC
TTATGTTGAGAAATTAGTTTAAGTACTTGATAACGTGATCAAAAACTCGG
TAATCGATTTTTATCTTTTGTAACAAAGGAAAAGCTAACCAAAAGTTAAA
AAAATAAGCTTCCAGACTAGTGTTTTTATAAAGACTATGGTCCTATGAAA
TAGGCTAATGTGATATTAAAAAAACAGTGTTTCTTCAATTTTAGGATTTG
TCAAATCAAACATTGAATAGATATTCAAGAGACCTGGACACTATAGAAGA
CATTGATGCAAAAGGCCCTTTGTTTGTGTATGGTCTGCCGGCAACATTGT
TTATCCTTGTTCTACTCATTCTCTTTCTATTCTACTTATTATGTTGTTGT
GACAGGTATATCTTTTTCACTCTTATCTAATTTTTGTTTTTGCATGGTCT
ACCGGCAATTTCTGCTATTTTTTATGGTCTACTGCAGCATTGTTTATTCT
TGTTCTACTTATTCTTTTTCTATGCTACCTATTATGTTGTTGTCCGGGGG
GTGGTACTTGGGCAAAGTGAGTGCCGGGTATGTGGGAGCCATAAGGGGCC
CTTTTTAAAAACCCTCGAAAGTTTCAAAGGGGTATAAAAACTATGAATTA
GTAGTTGAGTTGAGTAGTTGAAAGGGTCCCAAAATTACAAAATATTAAAG
ATCAACTCCCTCAAAGGGAGTAGCGTAGACAGAAGGGGCGCAAAAACTGT
GTAAGAGAGCAGATTTTTATGACACTGTAATTATCTATTCATAATATAAA
AAGATGATTACTGTGTCATAAAAATCTGCTCTCCTACACATATTTTGCGC
CCCCACCCTTGGCTACGCTACTGAAAGGGTCATAAAATCTGGAAATTTTG
AGCTAAAAATAGTCTCTCAAAGGGTTGCGACCGTAGTACAGTGGTAGAGC
ATCCGGCTACGGTTCGCAAGGTTGTGGGTTCAACCCCCAGCCGGGTCATA
CCAAAGATTCCCAAAATGGTACTTGATGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTCTCTCTGCTTGATGCTCAGCAACTAAGAGAAGGATCAAGGGTAAG
TGGAGAAATCCAGGGAGAAAGAGTGGCGCCCTCCCCTACCTTCGGGTAGA
TAGCAATCGAAAGAGGAGCCTTCGAGTCGCCTCCGACTGCAGTCGCAGAC
TTACTAAAGGGTTGCAAAAACGTCAAATTCAGTCTCTCAAAGGGGCGATT
TTAGAACTTTGGCTCGGACATACCTGTCATCTCGCAAACCTAGTACCCTC
CGGGTATTGTTGCGAAAGGTATTCCTTTTTGTAAAAGGTATTCCTTTTTC
AGTCTCCATAATTTTTTACAAATCTCTCTGTAAGCCTTTTCATAGCCTTC
GTGTTTTTAGTACATGCTGTTTTCTGGTATTTTATGGAAAAGTAAGTCTT
ACATAACAGTGAAAAAGAATTCTTGAATTCCCAAAGTTTGTTGGGTGATG
ACGAAAAAGAAATTTTTTGAATGTCTTTCTTAAAGATAGATTTGTGCATT
TCCCCCCTGCAAATTGAATTAGAAAATAGCGTGTAACAGATGCACGAATC
CTATGAGATAGATTAATTCGAACTAAAACCTTGGTCACATCAAGATGAAT
CGCTAGGTATCTAGTCTGATTACAGCACCATTGTTTCTAACTTAAACTTG
CATTGAGAAATTATTTTGTTTTGCTCAATTTTTGATTAAACTTTAAACCA
CAAACCCAAGAGGGGTACTTTGTAACGTGATCAAAAATACTAACAGAGGA
AAAAGCTAACAAAATATGAAAATTTTTGTTTTTGAATAAGAGTGAAATCC
GTGAAATCGTTTGCTTACTCATCAATTATAATTTCCAAGCTTTTTCACAT
TGGATTGACATGGATGTGGCGCAAGATTAGTTAAAAAAAGGAAAAGAAAA
CATTGCTTATATAAGCAGAATAAAACAATAGGGAGACACTGTCCTGATAT
GAAATATGTGTCTGATATGAAACGGGAACACTTATGTAAAAACAAAACCT
TTAAGGGCTCTGGTCATAGTGAAAAATCAATTTCAGAATTTGAAGATAAA
ACCTTATGTTTTCGCTTCTTTGACATGTTTAAGAACAAACTGCTTTTGAA
AAAATGAATTTAAGTAATTACATCATGAGTAATTAAGGAATAAGTGTGGC
ATAGACCTTAATAAAACATCAAAACGACGCTGTTCATATATTTTTCACAA
AAAAAGCCTAATCTCCTTGGGGAAATTATTTTATTTTTTCAAACTTTTTT
TAAGTTCATGACAAATAATTTCTTTATTTAGATTTTTTCGGAAAAATTTT
CTATTTGGCTACATTCCAAGTTATAGCTGTTTTTGTATGGAAATTTACTG
GAGAAAATTGCCAAAAATGAGGTTTTTTGGAGATTTTAAAGGAAAGATAC
TTCCACAATTATTTTTAGATACTAAATAGATACATCACCTGAACCAGAAA
AAAATTCCAAAATGTTTGATTTTTACCGAGGTTAGGGCTTCGAAAGGTGA
AATACTCTTCTTCGAAAAACTCTTCGTTTTCTTCTTCATTTAATTTTTTC
ATCTCAATTCTTCGATTTTTAAATTCTAAAAATGTAGGTTTAACAGGACA
TATAAAAAAAGTTAAACATTAATCTTTTTAAAATGCAGAAATTGCCATTT
AAGTTGGTGTAAAATCGAAAAATTGGGTATGTCCAGAGCCCTTAAGCTTC
CAGACCATAGTTTATAATACGGGTTATGGTCTGATTTGGGCTAACAAAGT
GCTGAAAAATTAACATTCACAATAAATTTTGTTCATTTACAGACGGAGAG
ACATGAAGGTGAAAAGAACATCAAACACGACTAAAAATTCAAAATCCAAA
AGTTAGCATTACTTGCATTTACTTCACCTTATTCAAAGAGTTACCTTGTA
TAGCTGTTTGTTATAGTGAGCCTCTCGATACTAGAATCTGATTTAAAATG
CTCTGATACAACTCTATTTTCTTCTATCTGCCGAGAGTGCTCGATGATAT
TAGAGCTTGTTCAAATTAAAAGATAGAGACTTTGATTTATTATTTAGAAC
TTTAAGTTTCATGCCGCCCTTATGGACGACAATCATCAGCTAAATTGCTC
TGATAAATACACCTTTTCGACCGTAACCGTGGTAAGCCGCCTGCCACGTG
CTTTATTATTTAGTTATCCCCCTAAGCTCGATCCAGTCCTTTTTTACACC
TTTTTCTATGGATGCGAAAAAAAGACTAAGACGGTTTTAAGGTGGTGAAA
CGGCCAAAAAATGCTCTCGCGGCAATTGGTGGCTACGGTCGAAAAGGTGT
ATTACATTTACAAGTCTTTCTAATGTATAATTTCACTCGTTCCAGGCCTA
CTAGTTTTCATGAACGTCATTTAGAAATTTTACATATTTTTAGGTCATGA
AATTGACATACCGTATGATATACAAAACCAAGACCGGAATCAATCAACCC
AGCTACTCTACACTCCAGAGCTCCCGAGTCACCAGAGCAAACTTCAAAAA
GACGGCAAGAATAAAGCATCCAATTGGTCTCTTTACTTAGATGCCGGACG
AAGAAGTTTAAGTCGGGCATCCTCCCGAACAAGTGGTTTGGCATACTATT
CAGATGACCCGGTAAAAGGGACAGATGGCGAGGTTGCGGTATTTGTGGAA
AGTGGAAATCTAACACACCTCCATGTCAAACAATCTTCGTTACAGCCAAT
AAGAAGAGAGAATTCTTTTAATCCATAACATAACTTTTGGTGCGACCCTA
TAAAAGACTTTGGATTTAATTCAAACTAGACTAGTAAACCACGTCGTTGT
ATTTCGCTGCAGCTTAAGCTTGCAATGGGCTCTGTGTCTATGTTCACTGA
ATACAATGTCTTTCCAAACCACTCTCCCGCGGAAATTTCTATTCTTTTAT
AAGAACTCTTTATATAAGCACTATCTGCGTTCCTGTGTCCAAGGAAAGAC
AGACGCTTGCTAGTCTAAACTCAAACCTGTATAACTCGAATATTATTTTA
ACTCGAACAATTTTTATGGTCCCTTCGCTTAATAATACTTAATAAATCTT
ACTCCATAACTCGAAATTTCCATAACTCGAACAGAGTTTTGTGTTCCCCG
GG

Coding sequence (CDS) from alignment at sc0000345:242626..256327-

>TCONS_00020002 ID=TCONS_00020002|Name=TCONS_00020002|organism=Clytia hemisphaerica|type=CDS|length=768bp|location=Sequence derived from alignment at sc0000345:242626..256327- (Clytia hemisphaerica)
GTCATGAAATTGACATACCGTATGATATACAAAACCAAGACCGGAATCAA
TCAACCCAGCTACTCTACACTCCAGAGCTCCCGAGTCACCAGAGCAAACT
TCAAAAAGACGGCAAGAATAAAGCATCCAATTGGTCTCTTTACTTAGATG
CCGGACGAAGAAGTTTAAGTCGGGCATCCTCCCGAACAAGTGGTTTGGCA
TACTATTCAGATGACCCGGTAAAAGGGACAGATGGCGAGGTTGCGGTATT
TGTGGAAAGTGGAAATCTAACACACCTCCATGTCAAACAATCTTCGTTAC
AGCCAATAAGAAGAGAGAATTCTTTTAATCCATAAATGAAGGTGAAAAGA
ACATCAAACACGACTAAAAATTCAAAATCCAAAAGTCATGAAATTGACAT
ACCGTATGATATACAAAACCAAGACCGGAATCAATCAACCCAGCTACTCT
ACACTCCAGAGCTCCCGAGTCACCAGAGCAAACTTCAAAAAGACGGCAAG
AATAAAGCATCCAATTGGTCTCTTTACTTAGATGCCGGACGAAGAAGTTT
AAGTCGGGCATCCTCCCGAACAAGTGGTTTGGCATACTATTCAGATGACC
CGGTAAAAGGGACAGATGGCGAGGTTGCGGTATTTGTGGAAAGTGGAAAT
CTAACACACCTCCATGTCAAACAATCTTCGTTACAGCCAATAAGAAGAGA
GAATTCTTTTAATCCATAAATGAAGGTGAAAAGAACATCAAACACGACTA
AAAATTCAAAATCCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011234XLOC_011234Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020002-exon-sc0000345-1575043694:256290..256327TCONS_00020002-exon-sc0000345-1575043694:256290..256327Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1575043694:246473..246633TCONS_00020002-exon-sc0000345-1575043694:246473..246633Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1575043694:243877..243935TCONS_00020002-exon-sc0000345-1575043694:243877..243935Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1575043694:242626..243334TCONS_00020002-exon-sc0000345-1575043694:242626..243334Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1510915933:256290..256327TCONS_00020002-exon-sc0000345-1510915933:256290..256327Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1510915933:246473..246633TCONS_00020002-exon-sc0000345-1510915933:246473..246633Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1510915933:243877..243935TCONS_00020002-exon-sc0000345-1510915933:243877..243935Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1510915933:242626..243334TCONS_00020002-exon-sc0000345-1510915933:242626..243334Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1491911889:256290..256327TCONS_00020002-exon-sc0000345-1491911889:256290..256327Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1491911889:246473..246633TCONS_00020002-exon-sc0000345-1491911889:246473..246633Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1491911889:243877..243935TCONS_00020002-exon-sc0000345-1491911889:243877..243935Clytia hemisphaericaexon
TCONS_00020002-exon-sc0000345-1491911889:242626..243334TCONS_00020002-exon-sc0000345-1491911889:242626..243334Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020002-proteinTCONS_00020002-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345supercontigsc0000345:242626..256327 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.248626	0.907223	1.15496	1.89091	2.22697	3.20866	3.2529	3.97749	3.11822	4.58738	6.14608	0.660987	0.572399	1.48656	1.17706	4.64688	1.71744	0.64602	0.713833	1.48875	0.747445	3.87317	4.64992	1.24329	0.998479	1.72593	1.21473
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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