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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019965 ID=TCONS_00019965|Name=TCONS_00019965|organism=Clytia hemisphaerica|type=transcript|length=1314bp
TTCTTATCAGAGAGAGTCATTTTAACATGCTTCTGGGTGTAGGATAAAAC
ATGATACTCAACAgatttttgttggtttttggaTTTATATCAACCCTCAA
TTATGTACAGTATGTCACAAAAAAGTGGAAActaatttttatataaagta
aaatccccatgatttttgtgaaattttataACTATACATAATATTTCGAT
ATCCAAAATCTATTCAATAATCTTGAGAAATGAAAATCAATTGATTGAGT
gagttttgattttattcaatttttctaagCCCAGTTTAGATAATTGAGGA
TTTTACTTAAAAGAACATTTGTCCGCAACAATATATAATGAAAACTACGC
AATAGTAATGACTGTTCATTTCTgaacagtcaaaaaaaattgccaaaaga
agacattctaccaaaagcttcaaaaattttggcttCGATTTCTATTCAAA
GATTATTTGGATCTTCAGAAAGACATAGGTCGAATCAGATGGTGTAAATT
GTCTTTCTTTTCTACTTGTCAAAGCAAAATCAGATGTACAATCAAGAATT
GTTGAGTCTAGCTATAAGCTATTTGGAATTTGAATGTGATTCTAGATTTG
ATCTCAAAGACTTTAAACGATGAAAGTATACAGAATGACTGACAGAATGA
TTGATGTCTTGTCAAGACTTGCTTTACTTCATTTTATGCCATGCTGAAAC
CCAGGTTGGCAATACTATTTTTGTAAGTTTTGAATAGTTcaataacaaaa
attaatagttatcggacagttgctagtacaatatgagaaatattttacaa
gttccgagatttttctgCTCCGAAAAATCCAGCCAGAaagagtgaaatat
ttccatattaaaCGAGCAAATGTCTGGCACAGTCAGTTTGTATGAGATAT
TAAGGGTGGAATCAAGTTGACCAAAAGCCCCCTAAAGGGCAACCTAAGCT
AAAAATAGAGCTTTATTCTAcctatttttcaaatgtttttactTGAGAAA
AGtctattttttaaaagttaattACTGTGGAGATAAATTAACCTTACATT
GGGTATTTTCACGTTGTGTAATCATAGCAAATGTCAACGCAAAAGAtcca
atttttatttatataataATTGACTGTATGGTATGGAAATTTGTATGAAG
TTAACTGAAAGCACACAAAGTTGACCaggctgaaaatattttgggaaaat
ATCAACTTGGGGCAGATGATGACAGGGAAGGGAACACCTTCTtcacaaaa
taaattcataatAATAACAGTTAATAGAAGTCACTTGTAAGTTCTGGTGC
TACAAATTAAAAAC Run BLAST on NCBI transcript from alignment at sc0000339:251159..252472 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019965 ID=TCONS_00019965|Name=TCONS_00019965|organism=Clytia hemisphaerica|type=transcript|length=1314bp|location=Sequence derived from alignment at sc0000339:251159..252472 (Clytia hemisphaerica)
GTTTTTAATTTGTAGCACCAGAACTTACAAGTGACTTCTATTAACTGTTA
TTattatgaatttattttgtgaAGAAGGTGTTCCCTTCCCTGTCATCATC
TGCCCCAAGTTGATattttcccaaaatattttcagcctGGTCAACTTTGT
GTGCTTTCAGTTAACTTCATACAAATTTCCATACCATACAGTCAATtatt
atataaataaaaattggaTCTTTTGCGTTGACATTTGCTATGATTACACA
ACGTGAAAATACCCAATGTAAGGTTAATTTATCTCCACAGTaattaactt
ttaaaaaatagaCTTTTCTCAagtaaaaacatttgaaaaataggTAGAAT
AAAGCTCTATTTTTAGCTTAGGTTGCCCTTTAGGGGGCTTTTGGTCAACT
TGATTCCACCCTTAATATCTCATACAAACTGACTGTGCCAGACATTTGCT
CGtttaatatggaaatatttcactcttTCTGGCTGGATTTTTCGGAGcag
aaaaatctcggaacttgtaaaatatttctcatattgtactagcaactgtc
cgataactattaatttttgttattgAACTATTCAAAACTTACAAAAATAG
TATTGCCAACCTGGGTTTCAGCATGGCATAAAATGAAGTAAAGCAAGTCT
TGACAAGACATCAATCATTCTGTCAGTCATTCTGTATACTTTCATCGTTT
AAAGTCTTTGAGATCAAATCTAGAATCACATTCAAATTCCAAATAGCTTA
TAGCTAGACTCAACAATTCTTGATTGTACATCTGATTTTGCTTTGACAAG
TAGAAAAGAAAGACAATTTACACCATCTGATTCGACCTATGTCTTTCTGA
AGATCCAAATAATCTTTGAATAGAAATCGaagccaaaatttttgaagctt
ttggtagaatgtcttcttttggcaattttttttgactgttcAGAAATGAA
CAGTCATTACTATTGCGTAGTTTTCATTATATATTGTTGCGGACAAATGT
TCTTTTAAGTAAAATCCTCAATTATCTAAACTGGGcttagaaaaattgaa
taaaatcaaaactcACTCAATCAATTGATTTTCATTTCTCAAGATTATTG
AATAGATTTTGGATATCGAAATATTATGTATAGTtataaaatttcacaaa
aatcatggggattttactttatataaaaattagTTTCCACTTTTTTGTGA
CATACTGTACATAATTGAGGGTTGATATAAAtccaaaaaccaacaaaaat
cTGTTGAGTATCATGTTTTATCCTACACCCAGAAGCATGTTAAAATGACT
CTCTCTGATAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019965-exon-sc0000339-1491911889:251159..252472 | TCONS_00019965-exon-sc0000339-1491911889:251159..252472 | Clytia hemisphaerica | exon |
| TCONS_00019965-exon-sc0000339-1510915933:251159..252472 | TCONS_00019965-exon-sc0000339-1510915933:251159..252472 | Clytia hemisphaerica | exon |
| TCONS_00019965-exon-sc0000339-1575043694:251159..252472 | TCONS_00019965-exon-sc0000339-1575043694:251159..252472 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339 | supercontig | sc0000339:251159..252472 . |
Blast
The following BLAST results are available for this feature:
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