TCONS_00019894 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019894
Unique NameTCONS_00019894
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1790

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019894 ID=TCONS_00019894|Name=TCONS_00019894|organism=Clytia hemisphaerica|type=transcript|length=1790bp
ATAAAATTCATTTCGGTGTcctgcatgttttcatgttgtcCTAAAATAGA
TCAGTTAGAGAGAAAAAACAAAGAGTTCCTGTGTTTGAAAGTCTCTTCTT
TTATATATTTAGTTATaataagaaattgaaaatttgctcaTTCGTGGTAA
AAAATGGTTTCCAATGTAGCCCAAACGGGTGAAAATTCATCTGCTGCTGA
AACAAActcaaagaaatcaaagaaaaagtcagGTCCTCAATATGAATGCG
TCATCACATGCTTGGATGGCTCTGTGATCAACACTTCTGTTGAGaaaTCA
GCCAAAGGAGAAGAACTAGTCAATAAAGTAGCTCAAGAACTTGATGTGAA
ATCGAAAGATTATGTTGGTCTCCTTTTCAATAATGGAACAAGGcaatGGT
TGGATATTCATAAAGATATGAAACATCAGTTGGGAGatTCTAAAGCAGAA
TTTTTATTTCGGGTCAAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGA
AGATCATTTAAGATATTTACTTTATCTCCAGATTAGAGAAGATTTATCAG
AAAAAAGattAAAATGCACAGAAGAAGTAATTGCTCAACTTGGTGCATAT
ACTGCACAAgcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGA
TTACTTGAAAGATTATGAGTTTGCTGAGAATACCGATATACTTGAAAGAA
TCAATTTATTGCACAAACAACACAGGGGTCAAACACCTTTACAAGCTGAA
CTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATGGAGTGGACGT
ACATGATGCCATGGATACCAATGGGCATGTAGAGATTGGTATTGCTGCTT
TAGGAATAAACATCTATCGGGATGGAAAGCGTGAACAGCTTTTCAGATGG
CAAAATATGCATGACTTCAATTACAACCGAAGAAAATTCACCATTAAACT
CAAACAACCAGTGAGCGACAATGACAATAAGAAGAATTACGTATATTATT
TCGAATCTGCTAAAAGCTGCAAACAATGCTACAAAGTGGCTGTTGAATAT
CATTCTTTCTTCCGATTGACAAGACCTGATGCTCCACGAAAACGTGCTGA
CACCTTGAAAATGGGATCTAGCTTCAGATACAgTGATCGAACCTTGTATC
AACTGAGATACCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACTTC
AAACGAACGCCAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACACC
GTTGATTGAACCTGAAGTGCCATTCATTGAACCAACTAAAGTGGCACCAC
TTGAAGAAGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAA
GTAGAGTTCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtgagGA
ATGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCC
GCCGACGAATCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGAT
GAGGAGAAACCGTCAGAAGTCGACGAAGAACCCATCGAATATGAAGAAGT
TGAAATTGATGAAGCCAACCCTCAAGATGATCAATTTGATCCAAAAgagT
GGGAAGTTGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGCGTCAGA
CGGCGTCGTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGATCTGGT
GAATGAAAATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAAATGCTC
CAACACAAGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Run BLAST on NCBI

transcript from alignment at sc0000339:287788..298726+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019894 ID=TCONS_00019894|Name=TCONS_00019894|organism=Clytia hemisphaerica|type=transcript|length=10939bp|location=Sequence derived from alignment at sc0000339:287788..298726+ (Clytia hemisphaerica)
ATAAAATTCATTTCGGTGTcctgcatgttttcatgttgtcCTAAAATAGA
TCAGTTAGAGAGAAAAAACAAAGAGTTCCTGTGTTTGAAAGTCTCTTCTT
TTATATATTTAGTTATaataagaaattgaaaatttgctcaTTCGTGGTAA
AAAATGGTTTCCAATGTAGCCCAAACGGGTGAAAATTCATCTGCTGCTGA
AACAAActcaaagaaatcaaagaaaaagtcagGTCCTCAATATGAATGCG
TCATCACATGCTTGGATGGCTCTGTGATCAACACTTCTGTTGAGGTTTGA
AGTTTTTATTTTCCccttgaattttgatttttgtcatCATGATCATGTAT
AGGCAAATGGAAAAAAAGCTATTAAATTTATCTCCAAAGTTAGTTTCTTG
ATTTGATTGGGTtggaatatttattttttgtctaCAAGAACAGGTTGGgt
ttaattaaattttaattCCAAATAGTGTGTTATACAGATTGTAAGTGTAT
ATTTAATGGTAATTGATTCGGATTAGGCtggacggcaaaccaacaatttt
ttaagtccagccttatTTTGACCTCTAAAAGGCCCTTATAAAGTGCACAA
AGAATTTTATCAATGATAATGTGTTTCTATAACCAATacaacaaagggtt
ttttcgattttagaaaTCAGCCAAAGGAGAAGAACTAGTCAATAAAGTAG
CTCAAGAACTTGATGTGAAATCGAAAGATTATGTTGGTCTCCTTTTCAAT
AATGGAACAAGGGTAagattttcagaatattttccTATTGTAAAAAGCTT
AACATTTTcaggataatttttttcattttaccaTGCACAGGAGTACCTTt
ccagaaaattattttgataaacttattttatttttcagcaatGGTTGGAT
ATTCATAAAGATATGAAACATCAGTTGGGAGGTTGGTACTTCTTCAGTtt
tgtttttggaattttttttagtgaaaatctttaaattatGCATAACTTGC
CCATTTCATTTCTCTTTATGAATTATTTAGCAAGGAAGAGGTGTTTTCAA
ATgtgctttttatttatttcagatTCTAAAGCAGAATTTTTATTTCGGGT
CAAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGAAGATCATTTAAGGT
TTGTTATTTGTTTTCCCCTTTCtatacaaaaatgtttttgtttgaccCAG
CTTTATATTTTTTGCTCAAGTCTCAATATATTGACTGAATTATTTACTCA
Atgcaaattcaaattcaaaaacaaatgttttttattccttttaatgattt
tagtgaaacaggtttttaaattttggaattcttttgaaacccattaaatt
tttgtgttttcagATATTTACTTTATCTCCAGATTAGAGAAGATTTATCA
GAAAAAAGGTAAATAATGTTTATCTAGTTAACAAATTGTGTTGGTATAGG
TTTCCATGGAGAAGTTGGATTACAGCTTATTctaattaatgtaattaaag
tATATCCTTTAATCATCAAAATTACTTGGCACTTAGCAGCCATATTATTG
ATTTTAAtgacatcatttttttctttaagattAAAATGCACAGAAGAAGT
AATTGCTCAACTTGGTGCATATACTGCACAAggtaaatttgttttaaaac
ctTTGGCAATGTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCT
GTCAACCAAAGTTTAAAAGTCTTAACTgatatttttcaacatttaaaaaa
ttgagattcCAATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCA
TGTTTATTAAAacttatttgaaatttcaattgatattttttcagcTGAAG
TAGGAGACTTCAATTTATCAGAGCATGAGCATGATTACTTGAAAGATTAT
GAGTTTGCTGAGGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTT
AAGCTGAAATCACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttA
CCATAGAATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACA
CAGGtattcattttcttcatttttgattcAGTTCCAACCTTCTCTTGTAC
TTTTTTCACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGC
ATAAATGTCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAAC
ACCTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTA
GATATGGAGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAAA
TGAAGTTTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTA
TGTTCAAATATTGAATGTTCTTTTTTTGTCTTTAGGATACCAATGGGCAT
GTAGAGATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAA
GCGTGAACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACC
GAAGAAAATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTC
CTTTAGCTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACAtgtttc
taaaatattcagtaattttaaatgttttatttcaGAGCGACAATGACAAT
AAGAAGAATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATG
CTACAAAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTG
ATGCTCCACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGA
TACAggtataaaaaattgttttcacaaaatatttatttcaccACTAACTC
CACTTCTATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTC
AATTTTTATGTTTCTAAATTAGAAGGTTGATTTaatgcatgtttttttta
taacaacatccaaaaaattttaagccttcggaatcggatgttcttaactt
tttcatttttaagcctaagaatgttcttaaaatcttcttaatttctacat
tttttgagtgtttttgtgcaattttgaaagaaatcgagtgttttagagcc
catgaagccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTCA
TCGAATATGTTCTtatcttatatagtttgttcttattaaaaaagcgtgta
tgttcTTTCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAA
GGTGATGAAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCAC
AAGGAAGACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAG
TGCCATTCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTA
AATTAATGCTTATTTCTGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTGTTTTCTTTAAGATTAAAATGCACAGAAGAAGTAATT
GCTCAACTTGGTGCATATACTGCACAAggtaaatttgttttaaaacctTT
GGCAATGTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCTGTCA
ACCAAAGTTTAAAAGTCTTAACTgatatttttcaacatttaaaaaattga
gattcCAATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCATGTT
TATTAAAacttatttgaaatttcaattgatattttttcagcTGAAGTAGG
AGACTTCAATTTATCAGAGCATGAGCATGATTACTTGAAAGATTATGAGT
TTGCTGAGGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTTAAGC
TGAAATCACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttACCAT
AGAATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGG
tattcattttcttcatttttgattcAGTTCCAACCTTCTCTTGTACTTTT
TTCACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCATAA
ATGTCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACACCT
TTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATA
TGGAGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAATGAAG
TTTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTATGTTC
AAATATtaaatgttctttttttgtCTTTAGGATACCAATGGGCATGTAGA
GATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTG
AACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGA
AAATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCCTTTA
GCTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACATGTTTCTAAAA
CATTCagtaattttaaatgttttatttcaGAGCGACAATGACAATAAGAA
GAATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACA
AAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCT
CCACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAg
gtataaaaaattgttttcacaaaatatttatttcaccACTAACTCCACTT
CTATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCAATTT
TTATGTTTCTAAATTAGAAGGTTGATTTaatgcatgttttttttataaca
acatccaaaaattttaagcTTTCGGAATCGgatcttcttaactttttcag
ttttaagcctaagaatgttcttaaaatcttcttaatttctacattttttg
agtgtttttgtgcaattttgaaagaaatcgagtgttttagagcccatgaa
gccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTCATCGAAT
ATGTTCTtatcttatatagtttgttcttattaaaaaagcgtgtatgttcT
TTCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGAT
GAAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAA
GACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCAT
TCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAAATTAA
TGCTTATttctggtttttacacaaaaaattGTGGTTGGAATATATGTCTG
GAGACTGAAGActaaattttcaaatctttttccttTAGTGGCACCACTTG
AAGAAGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAAGTA
GAGTTCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtgaggtatt
ttttattttggggAGCCTTTCGATGCTATTCTACAGTTTACTACAGTTGA
ATTAGTTCAGTTTTTTTtgctggaaatttttttatcttttcgtTTTATGA
GAAACTTGGATTCATAAGAAACTTGAAGAACTTTTTATTAAATCTTCAAA
GTCATTGAAAACTTTATCACTTTCCTCTAGGAATGGGAAACAGTTGAGAA
GACGATGCCTGATGGTTCGAAGAAGAAATCCCGTCGACGGGTCATCGTTC
TTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTTGAAGAACCA
GTTCAATATTATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGA
TAAATTTGATCCTAAGGTATATTGTTAGCACAGAATTTCCTTTTCCGAAA
TCTTCAGTGTGACCTGAAGATCTGGAAAACGAtaagattttgctgaaatt
ttgcctACTCTGACatgtcttttttttcctttNCGGATTTGGCTTATATT
TTGCGCACTCTGACATGTCTCTATtcctttttttgcttgagacgAGCTTT
GTACGATAGCTTCGCGTTCTTATCAATTTATAATATACTAAATTTAAGCC
CATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGCTTTCACT
GCATTTTGAACTCAATCAACTTCACTTACTTTCGTCTTCTTCAGGAATGG
GAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAG
ACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGAAATCTC
TAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGATGAAGCC
AATCCTGATGATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaattt
cttttttctaaaaacatcGGGGTGACCTGGAGATTGGGGGAACGATCGGA
TTTGGCTTATATTTTGCGCACTCTGACATGTCTCTATtcctttttttgct
tgagacgAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTATAATATA
CTAAATTTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTC
ATCTGCTTTCACTGCATTTTGAACTCAATCAACTTCACTTACTTTCGTCT
TCTTCAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGA
AGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAG
AGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGA
AGTTGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGTATCGT
TAGCAcagaatttcttttttctaaaaacatcGGGGTGACCTGGAGATTCG
GAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTCTGACATgtctctat
ttctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTAGT
TATtgagaaaatattgaatttaagCCCATTCGACTATGAAATAAGTTGTC
AATGTCTTTCACTGCAATATGAAGTCACTCAACTTCacttactttcgttt
tcttcagGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGA
AGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAG
ATTGGGAAATCTCCAGTCGAAGAACCAGTTCAATATAATGAAGAAGTAGA
GTTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATTTT
TTATTTGGGGAAAGCctttcaatgcaattttacaGGTGACGAGTTCAGTA
TTTTTTGCTGGAATTTTTTACGTCTTTTcgttttataagaaatttttcaa
aatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGA
AGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAATTATTGTT
CTTAATGTTGTGAAGAAACAAAAGAGTGGGAAATCTCCAGTCGAGGAAGA
ACCAGTTCAATATGAACAAGTGGAAGTTGATGAAGCCAATCCTGATGATG
ATAAATTTGATCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaa
acatcGGGGTGACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTT
TTGCGCACTCTGACATgtctctatttctttttttgcttgagacgAGCTNG
GGGGAACGATCGGATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTA
TtcctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTAT
CAATTTATAATATACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGT
TGCCAATGTCTTTCATCTGCTTTCACTGCATTTTGAACTCAATCAACTTC
ACTTACTTTCGTCTTCTTCAGGAATGGGAAACAGTCGAGAATACGATGCC
TGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTG
TGAAGAAACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATAT
TATGAAGAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTGA
TCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaacatcGGGGT
GACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTC
TGACATgtctctatttctttttttgcttgagacgAGCTTTGTACGATAGC
TTCGCGTTCTTAGTTATtgagaaaatattgaatttaagCCCATTCGACTA
TGAAATAAAAAGTTGCCAATGTCTTTCACCTGCTTTCACTGCAATATGAA
GTCACTCAACTTCacttactttcgttttcttcagGAATGGGAAACGGTCG
AGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATC
GTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGA
ACCCATTCAATATAATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATG
ATGATAAATATGATCCTGAGGTATGTTTTTTTTGGGGAAAcctttcactg
aaatttcaggCAATTTTACAGTTTGCAGGTGACGAGTTCAGTATTTTTGC
TGGAATTTTTTACGTctctttgttttataagaaacttttcaaaatcattt
taaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAAGAAGATG
CCTGATGGTTCAAAGAAAAAGTTCCGCCGACGAACCATTGTTCTTAATGT
TGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTC
AATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATAT
GATCCTAAGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAA
GCCAATATTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACG
AGCCAGGTCTACTCAAAtttacattatttttcaaatatctcCTCTAGGAA
TGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGAANGTTGTCAATGT
CTTTCACTGCAATATGAAGTCACTCAACTTCacttactttcgttttcttc
agGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAA
TTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGG
GAAATCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCG
ATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATGTTTTTTT
TGGGGAAAcctttcactgaaatttcaggCAATTTTACAGTTTGCAGGTGA
CGAGTTCAGTATTTTTGCTGGAATTTTTTACgtctttttgttttataaga
aacttttcaaaatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAA
ACAGTCGAGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACG
AACCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAG
TCGAGGAAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAGGCAAAT
CCTGATGATGATAAATTTGATCCTAAGGTATTGTTTGCACAGAAtttctt
tctctctctctcacTTTAAAGCCAATATTGTGCATCTCCGAGTCATTTGA
TGTTTTTCAGGTCTCAAACGAGCCAGATCTACTcaaatttacaatatttt
tcaaatatctcCTCTAGGAATGGGAAACAGTCGAGAAGACGATGCCTGAT
GGTTCGAAGAAGAAATTCCGCCGACGAATTATTGTTCTTAATGTTGTGAA
GAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATATG
AAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATCCT
AAGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAGCCAAT
ATTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGAGCCAG
GTCTACTCAAAtttacattatttttcaaatatctcCTCTAGGAATGGGAA
ACAGTCGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCCGCCGACG
AATCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGATGAGGAGA
AACCGTCAGAAGTCGACGAAGAACCCATCGAATATGAAGAAGTTGAAATT
GATGAAGCCAACCCTCAAGATGATCAATTTGATCCAAAAGTAAATAATTG
ATGTGACTTTCTTCAGTTTCTCTTACTTCATTACCTATGCCACATTTTGA
CATCTTgttttttacaatttcttaacTTAACTTGATACATCACATTTTAG
GCTTCCCAggcagtcacaacttaaccatcttttaattttttttaggagTG
GGAAGTTGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGCGTCAGAC
GGCGTCGTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGATCTGGTG
AATGAAAATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAAATGCTCC
AACACAAGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011193XLOC_011193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019894-exon-sc0000339-1491911889:287788..288081TCONS_00019894-exon-sc0000339-1491911889:287788..288081Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:287788..288081TCONS_00019894-exon-sc0000339-1510915933:287788..288081Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:287788..288081TCONS_00019894-exon-sc0000339-1575043694:287788..288081Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:288451..288549TCONS_00019894-exon-sc0000339-1491911889:288451..288549Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:288451..288549TCONS_00019894-exon-sc0000339-1510915933:288451..288549Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:288451..288549TCONS_00019894-exon-sc0000339-1575043694:288451..288549Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:288676..288718TCONS_00019894-exon-sc0000339-1491911889:288676..288718Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:288676..288718TCONS_00019894-exon-sc0000339-1510915933:288676..288718Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:288676..288718TCONS_00019894-exon-sc0000339-1575043694:288676..288718Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:288860..288935TCONS_00019894-exon-sc0000339-1491911889:288860..288935Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:288860..288935TCONS_00019894-exon-sc0000339-1510915933:288860..288935Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:288860..288935TCONS_00019894-exon-sc0000339-1575043694:288860..288935Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:289151..289195TCONS_00019894-exon-sc0000339-1491911889:289151..289195Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:289151..289195TCONS_00019894-exon-sc0000339-1510915933:289151..289195Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:289151..289195TCONS_00019894-exon-sc0000339-1575043694:289151..289195Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:289367..289419TCONS_00019894-exon-sc0000339-1491911889:289367..289419Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:289367..289419TCONS_00019894-exon-sc0000339-1510915933:289367..289419Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:289367..289419TCONS_00019894-exon-sc0000339-1575043694:289367..289419Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:289632..289699TCONS_00019894-exon-sc0000339-1491911889:289632..289699Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:289632..289699TCONS_00019894-exon-sc0000339-1510915933:289632..289699Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:289632..289699TCONS_00019894-exon-sc0000339-1575043694:289632..289699Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:289794..289840TCONS_00019894-exon-sc0000339-1491911889:289794..289840Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:289794..289840TCONS_00019894-exon-sc0000339-1510915933:289794..289840Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:289794..289840TCONS_00019894-exon-sc0000339-1575043694:289794..289840Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:289979..290066TCONS_00019894-exon-sc0000339-1491911889:289979..290066Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:289979..290066TCONS_00019894-exon-sc0000339-1510915933:289979..290066Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:289979..290066TCONS_00019894-exon-sc0000339-1575043694:289979..290066Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:290173..290322TCONS_00019894-exon-sc0000339-1491911889:290173..290322Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:290173..290322TCONS_00019894-exon-sc0000339-1510915933:290173..290322Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:290173..290322TCONS_00019894-exon-sc0000339-1575043694:290173..290322Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:290423..290592TCONS_00019894-exon-sc0000339-1491911889:290423..290592Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:290423..290592TCONS_00019894-exon-sc0000339-1510915933:290423..290592Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:290423..290592TCONS_00019894-exon-sc0000339-1575043694:290423..290592Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:291004..291161TCONS_00019894-exon-sc0000339-1491911889:291004..291161Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:291004..291161TCONS_00019894-exon-sc0000339-1510915933:291004..291161Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:291004..291161TCONS_00019894-exon-sc0000339-1575043694:291004..291161Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:293376..293482TCONS_00019894-exon-sc0000339-1491911889:293376..293482Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:293376..293482TCONS_00019894-exon-sc0000339-1510915933:293376..293482Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:293376..293482TCONS_00019894-exon-sc0000339-1575043694:293376..293482Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:298179..298376TCONS_00019894-exon-sc0000339-1491911889:298179..298376Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:298179..298376TCONS_00019894-exon-sc0000339-1510915933:298179..298376Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:298179..298376TCONS_00019894-exon-sc0000339-1575043694:298179..298376Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1491911889:298533..298726TCONS_00019894-exon-sc0000339-1491911889:298533..298726Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1510915933:298533..298726TCONS_00019894-exon-sc0000339-1510915933:298533..298726Clytia hemisphaericaexon
TCONS_00019894-exon-sc0000339-1575043694:298533..298726TCONS_00019894-exon-sc0000339-1575043694:298533..298726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:287788..298726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.355956	0	0	0.376296	3.75658	3.79438	3.0475	3.65808	0.505706	0.238396	0	0.375978	0.191618	0	0.215132	0	0.400885	0.173653	0	0.404861	0.445979	0.591016	0.679954	0.589734	0	0.64767	1.05214	0.677564	0.249601	0.242375
Blast
[Close]
BLAST of TCONS_00019894 vs. Swiss-Prot (Human)
Match: E41L2 (Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.219e-69
Identity = 141/351 (40.17%), Postives = 207/351 (58.97%), Query Frame = 1 
Query:  184 NSSAAETNSKKSKKKSGPQYECVITCLDGSVINTSVEKSAKGEELVNKVAQELDVKSKDYVGLLFNNGTRQ--WLDIHKDMKHQLGDSKAEFLFRVKFYEPEPSKIQEDHLRYLLYLQIREDLSEKRLKCTEEVIAQLGAYTAQAEVGDFNLSEHEHDYLKDYEFA--ENTDILERINLLHKQHRGQTPLQAELNFLEIAKKIPRYGVDVHDAMDTNG-HVEIGIAALGINIYRDGKREQLFRWQNMHDFNYNRRKFTIKLKQPVSDNDNKKNYVYYFESAKSCKQCYKVAVEYHSFFRLTRPDAPRKRADTLKMGSSFRYSDRTLYQLRYQKGDEAPKNAANFKRTPSTR 1221
            N   AE  S+K  KK+    +C +T LDG+  +  +EK AKG+ L +KV + L++  KDY GLLF     Q  WLD  K++K QL +    F F VKFY P+PS++ ED  RY L LQ+R+D++  RL C+    A LG+YT QAE+GD++  EH    L +++FA  +  ++ E++  LHK HRG +P QA+  FLE AK++  YGVD+H A D+ G  +++G+ A G+ IY+D  R   F W  +   +Y R  F IK++ P      +    +   + ++ K+ +KV VE+H+F+RL  P+ P K A  L +GS FRYS RT  Q R Q      + A +F+RT S R
Sbjct:  200 NELKAEKASQKVTKKT-KTVQCKVTLLDGTEYSCDLEKHAKGQVLFDKVCEHLNLLEKDYFGLLFQESPEQKNWLDPAKEIKRQLRNLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDIASGRLPCSFVTHALLGSYTLQAELGDYDPEEHGSIDLSEFQFAPTQTKELEEKVAELHKTHRGLSPAQADSQFLENAKRLSMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVR-PAELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPK-AKFLTLGSKFRYSGRTQAQTR-QASTLIDRPAPHFERTSSKR 546
The following BLAST results are available for this feature:
BLAST of TCONS_00019894 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L21.219e-6940.17Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2... [more]
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