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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019839 ID=TCONS_00019839|Name=TCONS_00019839|organism=Clytia hemisphaerica|type=transcript|length=143bp
cgagaaagaagaaggatgCTTTTATACAATTTctgtttaatttctttttg
tcattcaaCCGTGTTGTGGCAACATCTCTCCTGCTTCCAAGTGCCATGAA
CAATAAGGATTAATTTTTGAAAGtgTCCTGGTCAGTTCAATCA Run BLAST on NCBI transcript from alignment at sc0000338:166176..168043- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019839 ID=TCONS_00019839|Name=TCONS_00019839|organism=Clytia hemisphaerica|type=transcript|length=1868bp|location=Sequence derived from alignment at sc0000338:166176..168043- (Clytia hemisphaerica)
CGAGAAAGAAGAAGGATGCTTTTATACAATTTCTGTTTAATTTCTTTTTG
TCATTCAACCGTGTTGTGGCAACATCTCTCCTGCTTCCAAGTGCCATGAA
CAATAAGGATTAATTTTTGAAAGGTATGTTGCTTTTTTTCTGGCCGTTAA
AATAGATTTACCTCGCTCGCGCAGACAAACATAAAAAGACTCATCAAAAA
GTGAGGAACTAAAAAACTTTGTTTACATGCATCAACTTTACAGGCACATG
TTCAACTTTTTCGCATTTAGACCTTTTTATTTAAACTTTGTCATCTTTAC
CCCTGCGGACGACATTTTCGTAAAAATTAGGGCCTTGGTTTGGAATTTCC
TTCCCAGACCCCCGCGCTCAATACATAGGATCTATCATCGGGACAGCTTG
CTGACAGATCGAGATGTGATTGATGGATTACTTATCGATTCGGATAGGAG
ATTGATCAAAGATTGATACTCAAGATTTTATAAGCTTATGATTAATTATC
GATTATGCATTCGATTTATCATCAATAATATTTTTCGATCATATTGATTT
TATCCATTCTTTCTAATGATCGAGCTCTATCGATTTACAATCGATGTACT
TGATTGAACTAATACTAGCTCGATAAATATTATTATTATTATCAGCAAAG
GATCAATACTCAAGACTTTTTTATGGCTGAATCCTCTATCAATCTCCTAG
GCGGCAATCACAAAATATCTTCATTTCGCGTCCTCGTTGGATTTAAAAAG
TGAGTCTGTCGGTCGGTCGGTAGTAAAAATTTTCGGGTTTTCTTAAAATT
GGTCTGTGAGGCGGTAAAAGGTAAAAGGGCGTTAACTGAGGCGACAGGAG
GCCCAATCGCATGTATGTTTTGCGTGGTTTCAGATTATGAGATTTAAACA
CTGTGACCTTTGACACCTAATGGCACACGTGTAATGATAAACAAAATTAA
AATGCTGCGAATGCGCTAGAAATCGCTAACAAAAATCGACAAAAATAAAA
ATTTCGAGCAAAGGAAACGTCATCAAAACAAAAAGTCCGAAAAATTTACC
GACTCTCCGACTCAATTTCACTCAATTTTCAGGAGTCGGTCGGGCGACGT
GAAACGAAGATATTTGTGATTGCCGCCCTATCCGGATCGATAAGTAATCC
ATCAATCACATATCGTTCTGTCATCAAGCCATCCCGATGGTCGATAGGAT
TGATCACATAGGTCGGGCCATTTTTCAGAAAATGTCTTAGAAATCCCAAG
TTTTTCAAAAATCATTTTGACTTAAATTCTGTGTTGCCCCCCTCCCATTT
AAAGATTGGAATGGCAGGCATTTGCATACGCTTTGGATATTTTCAGTGCA
CAAATACAATATGGACAGCCCCAATAGTGGTTTAAATTTTCTTAATTATC
GCGTGGATACAAAATAGGGGATGCATAAGATTTTTTATATTGTTGCTGTA
AAATCAAAAGGTCTACAGTATTACTGGTATTTTATTGGTTTGATTGTCAT
TTGACTGGCTAGTTTAAAACGCAGGTCCCAATTTCTCTCAAAAGAAAGTG
TTAATAGAGCAACAGTACTCTGAGGCCAGAAAGATTACATCATTTAACCC
AGGATTCCCTCTCACCAAACCATTTTCAAAAAGTGACCCAGGAGGGGAGT
GGGTTTGAGTCTTCCCTTAAAATTTAAGAATCTTTGTTTTAATCCCGGAT
GCGTCAAAAAAAGCAGTGGCACAAAACAATTCAAGAGAAGTTTTAACTTT
GGCGAGAACTGAGTTTGGTGTAATCAGTGAAAAAATGACCACCCTGGAGA
GGGTTTATTTTCAGACAGATACTAATAATCTTTTTTTTTTCTTTACAGTG
TCCTGGTCAGTTCAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019839-exon-sc0000338-1575043694:167921..168043 | TCONS_00019839-exon-sc0000338-1575043694:167921..168043 | Clytia hemisphaerica | exon |
| TCONS_00019839-exon-sc0000338-1575043694:166176..166195 | TCONS_00019839-exon-sc0000338-1575043694:166176..166195 | Clytia hemisphaerica | exon |
| TCONS_00019839-exon-sc0000338-1510915933:167921..168043 | TCONS_00019839-exon-sc0000338-1510915933:167921..168043 | Clytia hemisphaerica | exon |
| TCONS_00019839-exon-sc0000338-1510915933:166176..166195 | TCONS_00019839-exon-sc0000338-1510915933:166176..166195 | Clytia hemisphaerica | exon |
| TCONS_00019839-exon-sc0000338-1491911889:167921..168043 | TCONS_00019839-exon-sc0000338-1491911889:167921..168043 | Clytia hemisphaerica | exon |
| TCONS_00019839-exon-sc0000338-1491911889:166176..166195 | TCONS_00019839-exon-sc0000338-1491911889:166176..166195 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338 | supercontig | sc0000338:166176..168043 - |
Blast
The following BLAST results are available for this feature:
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