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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019204 ID=TCONS_00019204|Name=TCONS_00019204|organism=Clytia hemisphaerica|type=transcript|length=1756bp
AagtgatttgttttgatttttgcggACCGGATGGAAGCAGTTAACAACAA
AACCATTTCGCGATTTCTCATCTCAAAAATTTCCTCCGGCGAAGTTTGAA
GTTGAACTGTTGAATTTTGTCTTGGGGTTTATTCCACTATCATCCATTTA
ATTTTATATTGAATTAAAGGATATTTGATAATGATTACTGAAAATCAGAC
ACAAGTTATACCAACAGCTCCACCAGGAGAACCACAGAACGAAAAAGTAC
CCGCagaatttgaagaaattgaagTTCCGAATTTCTGGCACGAAGGAAAC
TTCAAAAGAGTCACCAAACGTATCGATGATGGAGCAAGAGTTCTTGAAGA
TATATCAAAAATGATTCATGAAAGAGCTGAGATAGAGAATTTATATGCTT
CTaaactaaaagcTTGGGAAAAGAAGTGGAAAGAGAATTTGCAACGTTCC
GGAGAATATGGAAGTATGGTGACCGGCCTGACAAAAGTGTTTGATGAAGG
CCATTCCATCAGTGATCTTCATCTCTCGGTCTTTGGAAAGCTGGATAATT
TATCAAAAGAAACTTTACAATGGAAGCAACAAAaatatccaaaatctttg
acaaaATATAAAGAAGTACGAAGAAGCGATGAAGCTTTCAGCAAAGCACA
AGGACCATGGATGAATAGATACAAAGAAGTTCAAAAATGTATGAAGGCGT
ATCATTCAGCTAAAGATATGTTACGTACACTGAAAGAACAAGAGAAGAAT
CTGAGAATGAATACACCCGAAACTTCTCAAGATCAAATTAACAAAATCAA
CACCAAAATCAAGAAATGCGAACTGGAAATTGAGAACAGTGACAACAAAT
ATCATAATGCTGTTCGAGATATCACAAATTATAATCCTAAGTATCAAGAA
GATATGAGTTATGAATTCAATCTATGTCAAGAATTTGAAAAGGTTCGAAG
AGAAATTGTGAAAGAGAAATTGGCACAGCTAGTTTCTTGTTTGGATCGAC
GAATCTTCATCGAGaaCTACAATGGGATATATTTAGATACAGAGAATGTC
GTGAATGGAATGAATATTGATGAAGATTTGAATTGGTTTCATCAAATGCG
TGGACCTCATCACCCTTTCGTGCCTGTTCAATACATTGATTACGACCCAA
TGTTTCATTCAGTAGCGGCAAATAACAAAGCTAATGCAGCAACGTCTTCG
CCTCGACCAAAGAGTAAAAGTCCAAGTAGCAGTGTCTGCACTACTTTATA
ATACTGATCAATTTAATATTCAAATGGCAATTATCTGTGATTTTTTGTTA
TGGGCTGGAAtaataccctgagtatcagatgTCAAGTTTTCATACAGAAA
ATATTAACTCGATAttttattcgagctgtgatactcatgGTACCggaata
ggccttttcataaatcacgtcacgaacatcacttgcctcgttttaaaatt
attgccaaggtgattaactcccagtggattttattaaaactactttctat
tcataaaaaatcatttaatgtctcaacggatataatcaccatggtaattg
tttgaatacgaggcaagtgatgttttgtgacgtaatttatgaaaaggtct
acttaagtggattaattttcgcgtggattaattttcgcgattttcgcgta
ttttgaccattttcgcgaaattttgtccacgcgaaatttttagaattgca
atttttgccaaaacccctaggaaaatgaaagaaattaggtaAAAAACAGG
CCAAAT Run BLAST on NCBI protein sequence of TCONS_00019204-protein >TCONS_00019204-protein ID=TCONS_00019204-protein|Name=TCONS_00019204-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MITENQTQVIPTAPPGEPQNEKVPAEFEEIEVPNFWHEGNFKRVTKRIDD
GARVLEDISKMIHERAEIENLYASKLKAWEKKWKENLQRSGEYGSMVTGL
TKVFDEGHSISDLHLSVFGKLDNLSKETLQWKQQKYPKSLTKYKEVRRSD
EAFSKAQGPWMNRYKEVQKCMKAYHSAKDMLRTLKEQEKNLRMNTPETSQ
DQINKINTKIKKCELEIENSDNKYHNAVRDITNYNPKYQEDMSYEFNLCQ
EFEKVRREIVKEKLAQLVSCLDRRIFIENYNGIYLDTENVVNGMNIDEDL
NWFHQMRGPHHPFVPVQYIDYDPMFHSVAANNKANAATSSPRPKSKSPSS
SVCTTL Run BLAST on NCBI transcript from alignment at sc0000321:21788..25846+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019204 ID=TCONS_00019204|Name=TCONS_00019204|organism=Clytia hemisphaerica|type=transcript|length=4059bp|location=Sequence derived from alignment at sc0000321:21788..25846+ (Clytia hemisphaerica)
AagtgatttgttttgatttttgcggACCGGATGGAAGCAGTTAACAACAA
AACCATTTCGCGATTTCTCATCTCAAAAATTTCCTCCGGCGAAGTTTGAA
GTTGAACTGTTGAATTTTGTCTTGGGGTTTATTCCACTATCATCCATTTA
ATTTTATATTGAATTAAAGGATATTTGATAATGATTACTGAAAATCAGAC
ACAAGTTATACCAACAGCTCCACCAGGAGAACCACAGAACGAAAAAGTAC
CCGCagaatttgaagaaattgaagTTCCGAATTTCTGGCACGAAGGAAAC
TTCAAAAGAGTCACCAAACGTATCGATGATGGAGCAAGAGTTCTTGAAGA
TATATCAAAAATGATTCATGAAAGAGCTGAGATAGAGAATTTATATGCTT
CTaaactaaaaggtaaaaaatatcttcctctttcaactttttatcaCTGA
AACCACACCAGCCAGGCACTCGCTCTCCTTTTTTGGTTTTACAATGTCTA
TCATTtccttttttatatttacgatTTTATAGTAGAAATGTCACTATAAA
GTTACATTTTAGGGTTGAAAATACGTTATGATAATGATAATAATTATATT
TATCATTTGAAGCTCTAAATaaatggaatgaaaaaatagcattctttttc
ccagacgatctcaatcgaacggaatcgacgattgaaccagtcgaaccaaa
tcgaatgcaatcgaccgattgaaattcgattgtcgaacgcaatcgaatat
taccgcaattttcagattcgattgatattcgattgcgttcgattgatgtt
cgattgtgttcgattgcgttcgatcgtcgattcattgacccccggattgt
tcatcgcataatttctacgggaaatcgaaagtaatttcattcggcttgtg
atgtttgagagcttggatgttgggaagctgcaagaattggaagaataaag
ccagacgatctcaatcgaacggaatcgacgatcgaacaacaatcgaacca
atcgaatattacccagagttttgacgttcgattgagattcgattgcgttc
aacaatcgaatttcaatcggtcgattgcgttcgatttggttcgatcgtcg
attctgttcgattgagatcgtctggtttttcaaaaaaggcagCAGTATTG
TCCGAAACGAAATAAGTGGGAGGACTGTATATTTCTATTATatgtttctt
cttctctatcTAGTTTCGTACTAATCATAAATTACAAATGTCGCGCTATT
TATATATCCACGTGACCCTACTGGTCACGTGGTCAAACTGTCAATCATAA
TTTCTATTCCACGACATTCCCCCCGAAAATATAAATCACAACAAGTATAG
CATAGCTGAACAGCTttgttttcttataataaaatacTAAGATCTTCGta
aaatagataaaaacaaGGCGACAATTTATTTCTCAAACTATTTAGTAagc
aaaattattatttttttcttgttttttattttgcctGTGCAGtagttttt
tctaaatattttaaaaatcgccattgtttttattatttagcTTGGGAAAA
GAAGTGGAAAGAGAATTTGCAACGTTCCGGAGAATATGGAAGTATGGTGA
CCGGCCTGACAAAAGTGTTTGATGAAGGCCATTCCATCAGTGATCTTCAT
CTCTCGGTCTTTGGAAAGCTGGATAATTTATCAAAAGAAACTTTACAATG
GAAGCAACAAAaatatccaaaatctttgacaaaATATAAAGAAGTACGAA
GAAGCGATGAAGCTTTCAGCAAAGCACAAGGACCATGGATGAATAGATAC
AAAGAAGGTTTGAACAAACAACGAAATTTACTTGTCATCTGCTGTGAAAT
AAACTCGTAACGGAAAAAAGATCCCAAAATTCCTCTCTCGTTAATCAAGC
AATTTATATAGGTATTTTCAATCATCGCATTTTCGCTAAAACGTGACCTT
CTTCGCGTTAATTCTCAAATTCTAATCTTCTCTCTTAATTTACTTTTCAC
AGTTCAAAAATGTATGAAGGCGTATCATTCAGCTAAAGATATGTTACGTA
CACTGAAAGAACAAGAGAAGAATCTGAGAATGAATACACCCGAAACTTCT
CAAGATCAAATTAACAAAATCAACACCAAAATCAAGAAATGCGAACTGGA
AATTGAGAACAGTGACAACAAATATCATAATGCTGTTCGAGATATCACAA
ATTATAATCCTAAGTATCAAGAAGATATGAGTTATGAATTCAATCTATGT
CAAGAATTTGAAAAGGTTCGAAGAGAAATTGTGAAAGAGAAATTGGCACA
GCTAGTTTCTTGTTTGGATCGACGAATCTTCATCGAGaagtaaatttgtt
ttttttagattctttcATCGAAGGTGTTCTTCTTCGAAGGTGTTATATAA
GGCCAAACTTTGTGCAACTGTTTCTCGGGGTCTTTATACAATCTCTTCTG
GATTTCCAATGATACAACCTTTTTTCAACTACGGCTCTACGTTGATTGAT
ACCGTAGCGTCATAGAAGTTTCGTTTGGGTTTACGTTTTGGTTTGcaaaa
ttatatatattttcaacgATTAAGTCTTTATTGTTTGACATAATATCTGT
AAAACTTATGTCAGTCTTTAAGAGAATTTCGTATTGGTGCGGTCTCGAAG
TCTATTCATTCATGAATAaacaattaattttgaaatattttgttcatCAT
AGCTACAATGGGATATATTTAGATACAGAGAATGTCGTGAATGGAATGAA
TATTGATGAAGATTTGAATTGGTTTCATCAAATGCGTGGACCTCATCACC
CTTTCGTGCCTGTTCAATACATTGTAAGTTGTAGGCCtggttttgttttg
atctggAATTAGACAATCTACTaattcaaaagaaatcaaacatTACCCAG
CTAAGCCTATAAAATAAAGCGAGTTCTTTTCCCTTTTCCCATAGTGTTAA
TAACTCTTTATCTCGCCTTGTCAATAAGACAGGGTTAAGTGGAACGGAAG
TTAACCGCCTCAAACCATCTTTAGACTTTAGAGCTACTTGATAAAATCAC
TACAACCAATCTATTATCCAAATAACTTTAGTttagacacccccttctca
caaaccccaAAAGGATTTTGTCAGCCAgcaggggtaaaaataacggtcTA
AAATTCAATGAGGATTGATATTCAAATGTTTCTAATGGCTGGGTATTCGA
ATaccaagtcagaaaattcagtggggatggaaacaATGACACAATATTTT
GTACCAAGGATTCGTTTATTTTCAGtgggacaaaaattgaagtataattt
tccttaggggacgatattttgaccaatttttctaGTCTGAGGaagtccca
ccgggtctgtgtgAATGGTGTATTTAGATATAACCCTTGTATaaaccaaa
aaataaaagactattttttgaatgttttatcTTCTTCCAGGATTACGACC
CAATGTTTCATTCAGTAGCGGCAAATAACAAAGCTAATGCAGCAACGTCT
TCGCCTCGACCAAAGAGTAAAAGTCCAAGTAGCAGTGTCTGCACTACTTT
ATAATACTGATCAATTTAATATTCAAATGGCAATTATCTGTGATTTTTTG
TTATGGGCTGGAAtaataccctgagtatcagatgTCAAGTTTTCATACAG
AAAATATTAACTCGATAttttattcgagctgtgatactcatgGTACCgga
ataggccttttcataaatcacgtcacgaacatcacttgcctcgttttaaa
attattgccaaggtgattaactcccagtggattttattaaaactactttc
tattcataaaaaatcatttaatgtctcaacggatataatcaccatggtaa
ttgtttgaatacgaggcaagtgatgttttgtgacgtaatttatgaaaagg
tctacttaagtggattaattttcgcgtggattaattttcgcgattttcgc
gtattttgaccattttcgcgaaattttgtccacgcgaaatttttagaatt
gcaatttttgccaaaacccctaggaaaatgaaagaaattaggtaAAAAAC
AGGCCAAAT Coding sequence (CDS) from alignment at sc0000321:21788..25846+ >TCONS_00019204 ID=TCONS_00019204|Name=TCONS_00019204|organism=Clytia hemisphaerica|type=CDS|length=5355bp|location=Sequence derived from alignment at sc0000321:21788..25846+ (Clytia hemisphaerica)
ATGATTACTGAAAATCAGACACAAGTTATACCAACAGCTCCACCAGGAGA
ACCACAGAACGAAAAAGTACCCGCagaatttgaagaaattgaagTTCCGA
ATTTCTGGCACGAAGGAAACTTCAAAAGAGTCACCAAACGTATCGATGAT
GGAGCAAGAGTTCTTGAAGATATATCAAAAATGATTCATGAAAGAGCTGA
GATAGAGAATTTATATGCTTCTaaactaaaagcTTGGGAAAAGAAGTGGA
AAGAGAATTTGCAACGTTCCGGAGAATATGGAAGTATGGTGACCGGCCTG
ACAAAAGTGTTTGATGAAGGCCATTCCATCAGTGATCTTCATCTCTCGGT
CTTTGGAAAGCTGGATAATTTATCAAAAGAAACTTTACAATGGAAGCAAC
AAAaatatccaaaatctttgacaaaATATAAAGAAGTACGAAGAAGCGAT
GAAGCTTTCAGCAAAGCACAAGGACCATGGATGAATAGATACAAAGAAGT
TCAAAAATGTATGAAGGCGTATCATTCAGCTAAAGATATGTTACGTACAC
TGAAAGAACAAGAGAAGAATCTGAGAATGAATACACCCGAAACTTCTCAA
GATCAAATTAACAAAATCAACACCAAAATCAAGAAATGCGAACTGGAAAT
TGAGAACAGTGACAACAAATATCATAATGCTGTTCGAGATATCACAAATT
ATAATCCTAAGTATCAAGAAGATATGAGTTATGAATTCAATCTATGTCAA
GAATTTGAAAAGGTTCGAAGAGAAATTGTGAAAGAGAAATTGGCACAGCT
AGTTTCTTGTTTGGATCGACGAATCTTCATCGAGaaCTACAATGGGATAT
ATTTAGATACAGAGAATGTCGTGAATGGAATGAATATTGATGAAGATTTG
AATTGGTTTCATCAAATGCGTGGACCTCATCACCCTTTCGTGCCTGTTCA
ATACATTGATTACGACCCAATGTTTCATTCAGTAGCGGCAAATAACAAAG
CTAATGCAGCAACGTCTTCGCCTCGACCAAAGAGTAAAAGTCCAAGTAGC
AGTGTCTGCACTACTTTATAAATGATTACTGAAAATCAGACACAAGTTAT
ACCAACAGCTCCACCAGGAGAACCACAGAACGAAAAAGTACCCGCagaat
ttgaagaaattgaagTTCCGAATTTCTGGCACGAAGGAAACTTCAAAAGA
GTCACCAAACGTATCGATGATGGAGCAAGAGTTCTTGAAGATATATCAAA
AATGATTCATGAAAGAGCTGAGATAGAGAATTTATATGCTTCTaaactaa
aagcTTGGGAAAAGAAGTGGAAAGAGAATTTGCAACGTTCCGGAGAATAT
GGAAGTATGGTGACCGGCCTGACAAAAGTGTTTGATGAAGGCCATTCCAT
CAGTGATCTTCATCTCTCGGTCTTTGGAAAGCTGGATAATTTATCAAAAG
AAACTTTACAATGGAAGCAACAAAaatatccaaaatctttgacaaaATAT
AAAGAAGTACGAAGAAGCGATGAAGCTTTCAGCAAAGCACAAGGACCATG
GATGAATAGATACAAAGAAGTTCAAAAATGTATGAAGGCGTATCATTCAG
CTAAAGATATGTTACGTACACTGAAAGAACAAGAGAAGAATCTGAGAATG
AATACACCCGAAACTTCTCAAGATCAAATTAACAAAATCAACACCAAAAT
CAAGAAATGCGAACTGGAAATTGAGAACAGTGACAACAAATATCATAATG
CTGTTCGAGATATCACAAATTATAATCCTAAGTATCAAGAAGATATGAGT
TATGAATTCAATCTATGTCAAGAATTTGAAAAGGTTCGAAGAGAAATTGT
GAAAGAGAAATTGGCACAGCTAGTTTCTTGTTTGGATCGACGAATCTTCA
TCGAGaaCTACAATGGGATATATTTAGATACAGAGAATGTCGTGAATGGA
ATGAATATTGATGAAGATTTGAATTGGTTTCATCAAATGCGTGGACCTCA
TCACCCTTTCGTGCCTGTTCAATACATTGATTACGACCCAATGTTTCATT
CAGTAGCGGCAAATAACAAAGCTAATGCAGCAACGTCTTCGCCTCGACCA
AAGAGTAAAAGTCCAAGTAGCAGTGTCTGCACTACTTTATAAATGATTAC
TGAAAATCAGACACAAGTTATACCAACAGCTCCACCAGGAGAACCACAGA
ACGAAAAAGTACCCGCagaatttgaagaaattgaagTTCCGAATTTCTGG
CACGAAGGAAACTTCAAAAGAGTCACCAAACGTATCGATGATGGAGCAAG
AGTTCTTGAAGATATATCAAAAATGATTCATGAAAGAGCTGAGATAGAGA
ATTTATATGCTTCTaaactaaaagcTTGGGAAAAGAAGTGGAAAGAGAAT
TTGCAACGTTCCGGAGAATATGGAAGTATGGTGACCGGCCTGACAAAAGT
GTTTGATGAAGGCCATTCCATCAGTGATCTTCATCTCTCGGTCTTTGGAA
AGCTGGATAATTTATCAAAAGAAACTTTACAATGGAAGCAACAAAaatat
ccaaaatctttgacaaaATATAAAGAAGTACGAAGAAGCGATGAAGCTTT
CAGCAAAGCACAAGGACCATGGATGAATAGATACAAAGAAGTTCAAAAAT
GTATGAAGGCGTATCATTCAGCTAAAGATATGTTACGTACACTGAAAGAA
CAAGAGAAGAATCTGAGAATGAATACACCCGAAACTTCTCAAGATCAAAT
TAACAAAATCAACACCAAAATCAAGAAATGCGAACTGGAAATTGAGAACA
GTGACAACAAATATCATAATGCTGTTCGAGATATCACAAATTATAATCCT
AAGTATCAAGAAGATATGAGTTATGAATTCAATCTATGTCAAGAATTTGA
AAAGGTTCGAAGAGAAATTGTGAAAGAGAAATTGGCACAGCTAGTTTCTT
GTTTGGATCGACGAATCTTCATCGAGaaCTACAATGGGATATATTTAGAT
ACAGAGAATGTCGTGAATGGAATGAATATTGATGAAGATTTGAATTGGTT
TCATCAAATGCGTGGACCTCATCACCCTTTCGTGCCTGTTCAATACATTG
ATTACGACCCAATGTTTCATTCAGTAGCGGCAAATAACAAAGCTAATGCA
GCAACGTCTTCGCCTCGACCAAAGAGTAAAAGTCCAAGTAGCAGTGTCTG
CACTACTTTATAAATGATTACTGAAAATCAGACACAAGTTATACCAACAG
CTCCACCAGGAGAACCACAGAACGAAAAAGTACCCGCagaatttgaagaa
attgaagTTCCGAATTTCTGGCACGAAGGAAACTTCAAAAGAGTCACCAA
ACGTATCGATGATGGAGCAAGAGTTCTTGAAGATATATCAAAAATGATTC
ATGAAAGAGCTGAGATAGAGAATTTATATGCTTCTaaactaaaagcTTGG
GAAAAGAAGTGGAAAGAGAATTTGCAACGTTCCGGAGAATATGGAAGTAT
GGTGACCGGCCTGACAAAAGTGTTTGATGAAGGCCATTCCATCAGTGATC
TTCATCTCTCGGTCTTTGGAAAGCTGGATAATTTATCAAAAGAAACTTTA
CAATGGAAGCAACAAAaatatccaaaatctttgacaaaATATAAAGAAGT
ACGAAGAAGCGATGAAGCTTTCAGCAAAGCACAAGGACCATGGATGAATA
GATACAAAGAAGTTCAAAAATGTATGAAGGCGTATCATTCAGCTAAAGAT
ATGTTACGTACACTGAAAGAACAAGAGAAGAATCTGAGAATGAATACACC
CGAAACTTCTCAAGATCAAATTAACAAAATCAACACCAAAATCAAGAAAT
GCGAACTGGAAATTGAGAACAGTGACAACAAATATCATAATGCTGTTCGA
GATATCACAAATTATAATCCTAAGTATCAAGAAGATATGAGTTATGAATT
CAATCTATGTCAAGAATTTGAAAAGGTTCGAAGAGAAATTGTGAAAGAGA
AATTGGCACAGCTAGTTTCTTGTTTGGATCGACGAATCTTCATCGAGaaC
TACAATGGGATATATTTAGATACAGAGAATGTCGTGAATGGAATGAATAT
TGATGAAGATTTGAATTGGTTTCATCAAATGCGTGGACCTCATCACCCTT
TCGTGCCTGTTCAATACATTGATTACGACCCAATGTTTCATTCAGTAGCG
GCAAATAACAAAGCTAATGCAGCAACGTCTTCGCCTCGACCAAAGAGTAA
AAGTCCAAGTAGCAGTGTCTGCACTACTTTATAAATGATTACTGAAAATC
AGACACAAGTTATACCAACAGCTCCACCAGGAGAACCACAGAACGAAAAA
GTACCCGCagaatttgaagaaattgaagTTCCGAATTTCTGGCACGAAGG
AAACTTCAAAAGAGTCACCAAACGTATCGATGATGGAGCAAGAGTTCTTG
AAGATATATCAAAAATGATTCATGAAAGAGCTGAGATAGAGAATTTATAT
GCTTCTaaactaaaagcTTGGGAAAAGAAGTGGAAAGAGAATTTGCAACG
TTCCGGAGAATATGGAAGTATGGTGACCGGCCTGACAAAAGTGTTTGATG
AAGGCCATTCCATCAGTGATCTTCATCTCTCGGTCTTTGGAAAGCTGGAT
AATTTATCAAAAGAAACTTTACAATGGAAGCAACAAAaatatccaaaatc
tttgacaaaATATAAAGAAGTACGAAGAAGCGATGAAGCTTTCAGCAAAG
CACAAGGACCATGGATGAATAGATACAAAGAAGTTCAAAAATGTATGAAG
GCGTATCATTCAGCTAAAGATATGTTACGTACACTGAAAGAACAAGAGAA
GAATCTGAGAATGAATACACCCGAAACTTCTCAAGATCAAATTAACAAAA
TCAACACCAAAATCAAGAAATGCGAACTGGAAATTGAGAACAGTGACAAC
AAATATCATAATGCTGTTCGAGATATCACAAATTATAATCCTAAGTATCA
AGAAGATATGAGTTATGAATTCAATCTATGTCAAGAATTTGAAAAGGTTC
GAAGAGAAATTGTGAAAGAGAAATTGGCACAGCTAGTTTCTTGTTTGGAT
CGACGAATCTTCATCGAGaaCTACAATGGGATATATTTAGATACAGAGAA
TGTCGTGAATGGAATGAATATTGATGAAGATTTGAATTGGTTTCATCAAA
TGCGTGGACCTCATCACCCTTTCGTGCCTGTTCAATACATTGATTACGAC
CCAATGTTTCATTCAGTAGCGGCAAATAACAAAGCTAATGCAGCAACGTC
TTCGCCTCGACCAAAGAGTAAAAGTCCAAGTAGCAGTGTCTGCACTACTT
TATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019204-exon-sc0000321-1491911889:21788..22199 | TCONS_00019204-exon-sc0000321-1491911889:21788..22199 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1510915933:21788..22199 | TCONS_00019204-exon-sc0000321-1510915933:21788..22199 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1575043694:21788..22199 | TCONS_00019204-exon-sc0000321-1575043694:21788..22199 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1491911889:23328..23594 | TCONS_00019204-exon-sc0000321-1491911889:23328..23594 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1510915933:23328..23594 | TCONS_00019204-exon-sc0000321-1510915933:23328..23594 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1575043694:23328..23594 | TCONS_00019204-exon-sc0000321-1575043694:23328..23594 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1491911889:23790..24126 | TCONS_00019204-exon-sc0000321-1491911889:23790..24126 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1510915933:23790..24126 | TCONS_00019204-exon-sc0000321-1510915933:23790..24126 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1575043694:23790..24126 | TCONS_00019204-exon-sc0000321-1575043694:23790..24126 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1491911889:24490..24610 | TCONS_00019204-exon-sc0000321-1491911889:24490..24610 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1510915933:24490..24610 | TCONS_00019204-exon-sc0000321-1510915933:24490..24610 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1575043694:24490..24610 | TCONS_00019204-exon-sc0000321-1575043694:24490..24610 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1491911889:25228..25846 | TCONS_00019204-exon-sc0000321-1491911889:25228..25846 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1510915933:25228..25846 | TCONS_00019204-exon-sc0000321-1510915933:25228..25846 | Clytia hemisphaerica | exon |
| TCONS_00019204-exon-sc0000321-1575043694:25228..25846 | TCONS_00019204-exon-sc0000321-1575043694:25228..25846 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000321 | supercontig | sc0000321:21788..25846 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00019204 vs. Swiss-Prot (Human)
Match: PACN1 (Protein kinase C and casein kinase substrate in neurons protein 1 OS=Homo sapiens GN=PACSIN1 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.505e-45 Identity = 96/297 (32.32%), Postives = 155/297 (52.19%), Query Frame = 1
Query: 280 NFWHEGNFKRVTKRIDDGARVLEDISKMIHERAEIENLYASKLKAWEKKWKENLQRSGEYGSMVTGLTKVFDEGHSISDLHLSVFGKLDNLSKETLQ-WKQQKYPKS-LTKYKEVRRSDEAFSKAQGPWMNRYKEVQKCMKAYHSA---KDMLRTLKEQEKNLRMNTPETSQDQINKINTKIKKCELEIENSDNKYHNAVRDITNYNPKYQEDMSYEFNLCQEFEKVRREIVKEKLAQLVSCLDRRIFIEN--YNGIYLDTENVVNGMNIDEDLNWFHQMRGPHHPFVPVQYIDYDP 1149
+FW GN+KR KRIDDG R+ D+ + ERA+IE Y +L W K+W++ +++ +YGS+ + E +S+LH V L N E ++ W++ Y K + +KE + +++ F KAQ PW + KE++ KAYH A + + T + K + TPE Q K+ K+ KC+ +++ + KY + D+ P+Y E+M F CQ+FE+ R +KE L + L+ EN Y +Y + E + G + EDL WF GP P Q+ +++P
Sbjct: 18 SFWEVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSLERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPE----QQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLN---LAENSSYIHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWNP 307
The following BLAST results are available for this feature:
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