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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019199 ID=TCONS_00019199|Name=TCONS_00019199|organism=Clytia hemisphaerica|type=transcript|length=1124bp
tgtaaagacgcctttaaaaaaaaaactaaaacaaaagaacacaTATGTAG
CAAGACAGCAAAAGATACTATAAGTGCATTATTTTGGCATGAATTTAATT
TGgtaattttcgccaaatttaatccccgccaaagtTAATTTACTAAAGGT
GTGTTGCACTTgtaataaaacctttaatattaGCTGATAGAATCAagtca
aacaaaaacaaaatttaaatacGCCGATGGATTTAAGTCATAGTTCTCAG
TAAAAGTAACACGTGGTTgtgataaaaaatatcaatcgagTGAATAGTTC
AACAAATAAACTATGCAGCtttgctcgcagctctactctaccatgtTAGA
ATCTCATATTTGCCATTCGAGTAATTTTCATAGATTTGTAAACCAGCTAG
ATagcgtacttttgctgaaaagtgtgcagTGGATtccagcgcttgaccaa
tcagaagcttcacaGGTTTTCCaggggttttcgaaaacaatagcaacaat
attttttccgatattcacttttttttgcctgcaatGGCTTAACGCACAAC
ATCTAGCCCTTTTTGATTTCGAAAAAACTGTATCACAATTGAATTGTTAC
ATTCAGCTAATCGGCCATAGACCTTGTACTAGGTACAATGTCACATTGGA
TAATTAAAACTCCAGCAAATATCTCAATAACTCCAGGTTTCAATGGATGC
AAgggaaacaacaacaataatcaAAAGGGCCATTCCAGAGAAAGGATACG
TAACGTCACTCTGATTTTTGACTAGATGCCAGTAGGGACTTACATCGAGA
CAGTTGTTCAACCGGGCATAGACTCTAATAATTACAGTTACTGGAGGACA
ATATCTTGAAAAGACCCAAAAAGTGAGCCCAAAGTAAAGAAATAAACTGG
CTGCAAAACAGCCGAAAGTTGTTCAAAAGATTTTAAGTCAATACTCGCAA
TGGTTACACAAAATTATTCATCTTTGAACGGTGAATCATTCAAATCTTGC
TTTAGGTGATAAATGTTCTTTTGCATCGGTTAGGTTGCCATATGCAGTGA
GTGATCTTGGTTgggacagagcccaattttcgaaaaacatttttttccgg
ccgaaaatgccggaaatatgccgg Run BLAST on NCBI transcript from alignment at sc0000320:295158..296281 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019199 ID=TCONS_00019199|Name=TCONS_00019199|organism=Clytia hemisphaerica|type=transcript|length=1124bp|location=Sequence derived from alignment at sc0000320:295158..296281 (Clytia hemisphaerica)
ccggcatatttccggcattttcggccggaaaaaaatgtttttcgaaaatt
gggctctgtcccAACCAAGATCACTCACTGCATATGGCAACCTAACCGAT
GCAAAAGAACATTTATCACCTAAAGCAAGATTTGAATGATTCACCGTTCA
AAGATGAATAATTTTGTGTAACCATTGCGAGTATTGACTTAAAATCTTTT
GAACAACTTTCGGCTGTTTTGCAGCCAGTTTATTTCTTTACTTTGGGCTC
ACTTTTTGGGTCTTTTCAAGATATTGTCCTCCAGTAACTGTAATTATTAG
AGTCTATGCCCGGTTGAACAACTGTCTCGATGTAAGTCCCTACTGGCATC
TAGTCAAAAATCAGAGTGACGTTACGTATCCTTTCTCTGGAATGGCCCTT
TtgattattgttgttgtttcccTTGCATCCATTGAAACCTGGAGTTATTG
AGATATTTGCTGGAGTTTTAATTATCCAATGTGACATTGTACCTAGTACA
AGGTCTATGGCCGATTAGCTGAATGTAACAATTCAATTGTGATACAGTTT
TTTCGAAATCAAAAAGGGCTAGATGTTGTGCGTTAAGCCattgcaggcaa
aaaaaagtgaatatcggaaaaaatattgttgctattgttttcgaaaaccc
ctGGAAAACCtgtgaagcttctgattggtcaagcgctggaATCCActgca
cacttttcagcaaaagtacgctATCTAGCTGGTTTACAAATCTATGAAAA
TTACTCGAATGGCAAATATGAGATTCTAacatggtagagtagagctgcga
gcaaaGCTGCATAGTTTATTTGTTGAACTATTCActcgattgatattttt
tatcacAACCACGTGTTACTTTTACTGAGAACTATGACTTAAATCCATCG
GCgtatttaaattttgtttttgtttgactTGATTCTATCAGCtaatatta
aaggttttattacAAGTGCAACACACCTTTAGTAAATTAactttggcggg
gattaaatttggcgaaaattacCAAATTAAATTCATGCCAAAATAATGCA
CTTATAGTATCTTTTGCTGTCTTGCTACATAtgtgttcttttgttttagt
tttttttttaaaggcgtctttaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019199-exon-sc0000320-1491911889:295158..296281 | TCONS_00019199-exon-sc0000320-1491911889:295158..296281 | Clytia hemisphaerica | exon |
| TCONS_00019199-exon-sc0000320-1510915933:295158..296281 | TCONS_00019199-exon-sc0000320-1510915933:295158..296281 | Clytia hemisphaerica | exon |
| TCONS_00019199-exon-sc0000320-1575043694:295158..296281 | TCONS_00019199-exon-sc0000320-1575043694:295158..296281 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000320 | supercontig | sc0000320:295158..296281 . |
Blast
The following BLAST results are available for this feature:
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