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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018955 ID=TCONS_00018955|Name=TCONS_00018955|organism=Clytia hemisphaerica|type=transcript|length=1148bp
GTTTTGTAGTGTACTCGGAAtactaaacaaaataaaaataaataaaaatt
acttcagTGTATGCATAATTGTATGAGTTaaataataattaaaattttta
taaatctaATTGTTTCAAAATGCACGTGACTGTCCCAAATACAATCTGAT
AAGactaaacaaataaaatacaaagaataaaaaaaataaattcaattcaa
ttaaaaaatgacaaacaaatggaatgataagatctataaattgtaatgAT
GTAAggttgtttcatagaggtcaatagacctgagaattACACTTCTGAAA
ATTAAAATGCAAAGATGTTTTCACCAGGAGAGGTGTATAAGCTTTTAGTA
tggaaccaaaaaaaaaatagaatattATATCTAATTTTGCATTCCTTTGC
CTTTTggaaaagtttttgtaaaaatcatttaattaatgaaaaataatcTC
ACTGTAAAGTAACATCATAGTTTAAAAGAATATCaactaaaatttcagaa
attgacaGTAATTGAAATGGATGATGCTTAGCAATTTCAATTGCATTTGG
AATTGTATCGNGAAAACTTTCCAAATTAGGAAAGTGAaactattttcata
aattttgcaaaaagtacaaaaagttgCATGTTCCCAACAGCACAATTTGA
TAGATACCCTGGGATCGGGTAACATGCATCAGTGGCGGTTAACATGCATG
GCCATCAATTGAataacctggctggtcattaaaatacaaagttaaatcaa
aacaaattctcCTAATCATGAAAGTGATNTTTCTTGcaccattttctttc
aaaactttaGCGCATTCAATCAAGGTTTTGCCAGTCATAACTAGATCATC
AACAATAATACATTGCTTACCAGAAACTTCACCTTCTTTTATCTTGATAA
TTCGATCTTTCCCTGCTCTGACCTTCAGGCAAGTGGCAATTGggaaatca
ttttcaaaatgacttttGAAACGTTTTGTTGCACCCTCGTCTGGAAACAC
AATACATATATCTTTCATGTTCTCTGAAGCAATCTTCTTCNGTTGGCGAG
TAACAATATAAAAAAATACTCACTCAGCAGATACaccttttttctctttt
ttagaaatccacttttaagaaacatgagcctcagaatgcctaaaagct Run BLAST on NCBI protein sequence of TCONS_00018955-protein >TCONS_00018955-protein ID=TCONS_00018955-protein|Name=TCONS_00018955-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
MKDICIVFPDEGATKRFKSHFENDFPIATCLKVRAGKDRIIKIKEGEVSG
KQCIIVDDLVMTGKTLIECAKVLKENGARXITFMIRRICFDLTLYFNDQP
GYSIDGHAC Run BLAST on NCBI transcript from alignment at sc0000313:170954..172101 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018955 ID=TCONS_00018955|Name=TCONS_00018955|organism=Clytia hemisphaerica|type=transcript|length=1148bp|location=Sequence derived from alignment at sc0000313:170954..172101 (Clytia hemisphaerica)
agcttttaggcattctgaggctcatgtttcttaaaagtggatttctaaaa
aagagaaaaaaggtGTATCTGCTGAGTGAGTATTTTTTTATATTGTTACT
CGCCAACNGAAGAAGATTGCTTCAGAGAACATGAAAGATATATGTATTGT
GTTTCCAGACGAGGGTGCAACAAAACGTTTCaaaagtcattttgaaaatg
atttccCAATTGCCACTTGCCTGAAGGTCAGAGCAGGGAAAGATCGAATT
ATCAAGATAAAAGAAGGTGAAGTTTCTGGTAAGCAATGTATTATTGTTGA
TGATCTAGTTATGACTGGCAAAACCTTGATTGAATGCGCtaaagttttga
aagaaaatggtgCAAGAAANATCACTTTCATGATTAGgagaatttgtttt
gatttaactttgtattttaatgaccagccaggttatTCAATTGATGGCCA
TGCATGTTAACCGCCACTGATGCATGTTACCCGATCCCAGGGTATCTATC
AAATTGTGCTGTTGGGAACATGcaactttttgtactttttgcaaaattta
tgaaaatagttTCACTTTCCTAATTTGGAAAGTTTTCNCGATACAATTCC
AAATGCAATTGAAATTGCTAAGCATCATCCATTTCAATTACtgtcaattt
ctgaaattttagttGATATTCTTTTAAACTATGATGTTACTTTACAGTGA
gattatttttcattaattaaatgatttttacaaaaacttttccAAAAGGC
AAAGGAATGCAAAATTAGATATaatattctattttttttttggttccaTA
CTAAAAGCTTATACACCTCTCCTGGTGAAAACATCTTTGCATTTTAATTT
TCAGAAGTGTaattctcaggtctattgacctctatgaaacaaccTTACAT
cattacaatttatagatcttatcattccatttgtttgtcattttttaatt
gaattgaatttattttttttattctttgtattttatttgtttagtCTTAT
CAGATTGTATTTGGGACAGTCACGTGCATTTTGAAACAATtagatttata
aaaattttaattattatttAACTCATACAATTATGCATACActgaagtaa
tttttatttatttttattttgtttagtaTTCCGAGTACACTACAAAAC Coding sequence (CDS) from alignment at sc0000313:170954..172101 >TCONS_00018955 ID=TCONS_00018955|Name=TCONS_00018955|organism=Clytia hemisphaerica|type=CDS|length=330bp|location=Sequence derived from alignment at sc0000313:170954..172101 (Clytia hemisphaerica)
ATGAAAGATATATGTATTGTGTTTCCAGACGAGGGTGCAACAAAACGTTT
CaaaagtcattttgaaaatgatttccCAATTGCCACTTGCCTGAAGGTCA
GAGCAGGGAAAGATCGAATTATCAAGATAAAAGAAGGTGAAGTTTCTGGT
AAGCAATGTATTATTGTTGATGATCTAGTTATGACTGGCAAAACCTTGAT
TGAATGCGCtaaagttttgaaagaaaatggtgCAAGAAANATCACTTTCA
TGATTAGgagaatttgttttgatttaactttgtattttaatgaccagcca
ggttatTCAATTGATGGCCATGCATGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018955-exon-sc0000313-1491911889:170954..172101 | TCONS_00018955-exon-sc0000313-1491911889:170954..172101 | Clytia hemisphaerica | exon |
| TCONS_00018955-exon-sc0000313-1510915933:170954..172101 | TCONS_00018955-exon-sc0000313-1510915933:170954..172101 | Clytia hemisphaerica | exon |
| TCONS_00018955-exon-sc0000313-1575043694:170954..172101 | TCONS_00018955-exon-sc0000313-1575043694:170954..172101 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000313 | supercontig | sc0000313:170954..172101 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0009116 |
nucleoside metabolic process |
Blast
The following BLAST results are available for this feature:
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