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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018599 ID=TCONS_00018599|Name=TCONS_00018599|organism=Clytia hemisphaerica|type=transcript|length=3968bp
gtagaaatcaatttttttgtttactttttatccTAGATCTCCAAACAGAA
ATCAACAAATTACCACGAGTTCGCCAATTGTCAGAATCAACTGTAGAACG
TCTGATCACAGAACCTTCTCAGACTGATGCATCTTGGAAACATGCAAAAC
AAGCCTACAGGTGTCCTTTGTGTGCcaaagtatttcctttcaaaagTAAA
CTACAAAGACACGTACTGGTACACACTGGAATTAAACCCTACAAGTGTAC
TGTATGTGGACGCGGATTTACACAACAGATTGATCTTCAGCGTCACTTAA
CACGTCACACCGGTGAAAAGCCTTTCAAATGTCATCTCTGTAAAGCTCAG
TTCATACGTGCCGATAATTTACGTAAGCATTGTAAAGATGCTCATTACGT
TAGTATCGAAGAACCCATACGTAAAAGACGGCGTAAGACAACGGGAAGTG
ATACTGTTTTACCACCACTCGAGGTTGCAATCGCATTAGCGTTATCAGAA
ACTGAACGAAATGGCGGGCGTGTTCTTGGCCGCGCGACGACTCGCACGAG
CACGCGAACGACAGCCAGTTCAAACACTAAGCCAAGATATGCTCAAGGTG
ATGGTTCCATTCCGAAAGCACCTCCATCGCGCGGCGCACCTGACGAACGT
CATCCTCCAGGTAGCATGTACCCACCCCGTATGTCCTCACGTGGGGAAGG
TGGCCAACCACCATCTGGTTATCCTCCTAACTACCCACCACACCTTGGAC
CAAGACATCAACAAAATGTACGGTACCCATTCCATCATGACGCACGCACA
CACGGTGCCGCTTACCCACCGCCTCCACACCATCCACCACAACAAAGACG
ACAGCATTCACCTCCGGCCGAATTTCATCACCCATCGTCACCTTCTTCAT
ATCACAGGAATAGAGATAGGCGATACATGCACCTAGACTCCCCTTCCTCA
TCTAGATACTACCATCATGAAGGACCCCCTCCTCCCCCAGGAGCACGTGG
GTACTATTCACATCACGAAGACCGCTACCATGAGAAGGAGGAACGTGACC
CTCGTGATCGTCTTCCATCTTCGACAGCttccaaagaaaaatatcaagac
TATCATAGTGTATCTTTAGAACAGTCTCAATCTCAGTCATCAGGGGGCTA
CCCACCCCATAAGAGGTCACTGCCACCTGATCATCCTAATCGTCTACCAC
ATGCAGAGGATTCAGAATACTCTCATGAAGGGCGGAAAGAGGATGATTAC
TCGAGGTTACCATCGTCACAAGATAAACTAGCTCCTTATCGCATGTCTTC
ATCACAAATTCAACAGCATTCGCCCGTTGATTATATCCAACCGCGCGAAC
GCGAAGAAGAATCCGCTTACCGCGGTGGGGAGGACCGAGATCGTCCTCGG
AACCCTTACTCGGCACCACCGAGAAGTGAGGAAGACCACCGAGCATTATT
CCGAGGAAAACCATCAATCTCGTACGGCGATTATGGTACTACGAGTAAAA
CGAGTAGTCGACCGTCTTCCGACGTTAGTATGGTGCCACAAAATCGTGAA
TACAACAGAAGTATCCCTCCACCGGAAGCCACTTCTCCATATCAACCACC
TCAGCCGAGATCGAGTACAACTTCTTCAGAACCAGGCGATTTCGCTTCGA
TGGTGGATAAAGACGCTCTTATTGAACCCCGCCCATCCTCATCACCTCCA
CCCCCGCCACAGGCGACAGAGGATATAAATGAAGATAATGTGTATTCGGA
CGAAATTCCAATAGTAACTCCTAGCGATGATAACACTTTGACTGTTCCTC
AAAGTGCTGTTTCCTCTTGATAATCAATACCTTAACTCTTTTGAATTAGA
AAATGTTTTGTAAAGTCCTGCTGGAGTGCTTCTTTGAGGATATAACACAC
TGTTGCTTAAAGTACTGATACTCGACTATGTGTATATTTCCTAGTTAGGT
ATAGCAAATTTCAGTgggattttagaaaaatgagaatttttctaCAATAT
TATATATTATCAGTATAGTTAGTTTAGTAGCCTTTTTATTATACATttta
cttttaaactttttatatattatattttttctattttttttttccggtgT
GTCTGTCCAATTTATTTTCAGCCATATTTACATGtagaaaggaaaaaaat
aaaattccggataaaatttttgaaccaaGATTTTGTCcgaagtttttttt
tgggggTAGGATTTGTGTTTTGTGTTGTATGCTCATTCAGCTAGAATCTT
CCTTAGAAAAACGCCTTTTGTTCATCTTTAAAATTGTcttttgttgacaa
aatatgaaaaaaagttgatgctttctaattcgattttcaagagagTTTCG
ATATTATCTAATAATGAATCGTATCGAATGGCATTAAAGTCGAGTTACAG
AGCGTCGTATTTCAATTTGTTCTTTAGTTTGTTTTGGGTGtcactttgat
ttcaaaaatttggttTCATTGTTGACCAAAGTGTATGCCAAACAATGAAG
TATCTCCCCTTAAAGTTGTGTTTCCAGTTGACAAGAGTTTTGCTTCGTGT
GAAAATGCTCATATCGCGTTACTTTCCAGTTGAAGTTGGTCTTTCTACGA
CATTTTatgcataatttttttaaatatattttatttaggaAAACGTTTAG
GTTCTTTCCACTAAAAGTGGATTTTAATCGCGAATGTTGTCTTCATATAA
GAAAGTTCATTGAACAAATGGGACTGTGTTGTGAACGTCATGTGACATGG
TGACGTCATCATATTACCATAAGTTGacaatgaaattttttattgaaaat
aaataatttttatatgtggattattttttcttttgtttcatttaTCAACA
ATGCTATCTAATATTAATAATTAATGAATATATATTAGTCGCTATCTTTT
ACTTTATATATTATAACCCATATGAAAAATTATCATTAATATTATTGCTT
ATTTGTATTTGCCATTGTTTTCAACACAATTCTCGATGAGAAGTAGATTA
ATTACTGCCTCTAAAATTAATTCAGTGGTAGATAAAGGCGAAGAGTGTCT
TATAAAATAATCTAaagattgaaattattttattagcTAAAATATTAGCC
TCTTAAAATCAACAATACAGGGACCAAGAAActtcaaattagagaaatta
aGGGAGCCTTATGTTCATGGTTAAATTGCAGAAAAACTTGGAGCTCCGAC
TTAGATGAAGCCAATGATTGTTAGTTACAACTTTTATATTCCTTGTGAGG
AAATGCCCGTTCTCGGTTATAAATCCCCTGTATCTACCACCTAAGCTTTC
TTGCCCCCATCTTCGGCACCCCAATTGACGCTTTAGTTAGGACACGCCTT
TAGTTCGCGTACATTAGAACGATAAGATACAACGTACATTAGAACGATGA
GATACCTTATCAGGAAACTTATTAACGATTTTCCTGGTAAGAGCATATTA
GCTGTCGATGcttaaaatgtgttttcatTTGATTAGTAAGCCAATCAGAT
TGATTTGATCATAATGCTTGAATGCGAAATACATTGGCTTACACCTCCTA
TGAAAACGTATTTTGAATGTTCTCTAGGTAGGCAATTTGTAACTTTCCAG
TTCATATATTAGTCAAGATATAGAACCCCGCCAACAATGActggaaaata
tttgaatttttttaaaaacattatttttgctACAGTACAGTTAACATTTT
AAGAAACGAATATTATACTACCTTTAATGtatttcattttacaagaatAT
TATCGTGGTTGTATATATTATCCTTGAAcgaagaaaaataactttacTAT
AATACTCCTAATATGCTATAATACTCATAAACAATTTGTTTTACATTTAT
TTTAAACTCatataatacacgttttttttttataaggaacacgtttataa
ggaactcgaggctggaaatggttcaaaaaataaggaattgttaaggaact
gctcaggctgagaataag Run BLAST on NCBI protein sequence of TCONS_00018599-protein >TCONS_00018599-protein ID=TCONS_00018599-protein|Name=TCONS_00018599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
RNQFFCLLFILDLQTEINKLPRVRQLSESTVERLITEPSQTDASWKHAKQ
AYRCPLCAKVFPFKSKLQRHVLVHTGIKPYKCTVCGRGFTQQIDLQRHLT
RHTGEKPFKCHLCKAQFIRADNLRKHCKDAHYVSIEEPIRKRRRKTTGSD
TVLPPLEVAIALALSETERNGGRVLGRATTRTSTRTTASSNTKPRYAQGD
GSIPKAPPSRGAPDERHPPGSMYPPRMSSRGEGGQPPSGYPPNYPPHLGP
RHQQNVRYPFHHDARTHGAAYPPPPHHPPQQRRQHSPPAEFHHPSSPSSY
HRNRDRRYMHLDSPSSSRYYHHEGPPPPPGARGYYSHHEDRYHEKEERDP
RDRLPSSTASKEKYQDYHSVSLEQSQSQSSGGYPPHKRSLPPDHPNRLPH
AEDSEYSHEGRKEDDYSRLPSSQDKLAPYRMSSSQIQQHSPVDYIQPRER
EEESAYRGGEDRDRPRNPYSAPPRSEEDHRALFRGKPSISYGDYGTTSKT
SSRPSSDVSMVPQNREYNRSIPPPEATSPYQPPQPRSSTTSSEPGDFASM
VDKDALIEPRPSSSPPPPPQATEDINEDNVYSDEIPIVTPSDDNTLTVPQ
SAVSS Run BLAST on NCBI transcript from alignment at sc0000303:16350..20780+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018599 ID=TCONS_00018599|Name=TCONS_00018599|organism=Clytia hemisphaerica|type=transcript|length=4431bp|location=Sequence derived from alignment at sc0000303:16350..20780+ (Clytia hemisphaerica)
gtagaaatcaatttttttgtttactttttatccTAGATCTCCAAACAGAA
ATCAACAAATTACCACGAGTTCGCCAATTGTCAGAATCAACTGTAGAACG
TCTGATCACAGAACCTTCTCAGACTGATGCATCTTGGAAACATGCAAAAC
AAGCCTACAGGTGTCCTTTGTGTGCcaaagtatttcctttcaaaagTAAA
CTACAAAGACACGTACTGGTACACACTGGAATTAAACCCTACAAGTAAGC
GGTTTTTaactttgtatatattttttcctACAGTCTTTAATTGATGAAAA
GTGCTTgacgtgttcttatttttcatgatttacaGTCTCGTGCGCTCTTA
GCTGCTCTTAGATCTGCTTAGATATGCTACTCTTCATTTATTGATGAAAA
ATTGTATGTTCGAAATTTTTGAGATTCGACTCTGATATTGTTTCCAATTT
GTTttaaacttttgacaaaaaaattgagccTTGTGTTTGTACGTCAAGTA
GTAAAGCTTTTAAAAGCACATTTTTCCTCAATTTCACTTTCAGGTGTACT
GTATGTGGACGCGGATTTACACAACAGATTGATCTTCAGCGTCACTTAAC
ACGTCACACCGGTGAAAAGCCTTTCAAATGTCATCTCTGTAAAGCTCAGT
TCATACGTGCCGATAATTTACGTAAGCATTGTAAAGATGCTCATTACGTT
AGTATCGAAGAACCCATACGTAAAAGACGGCGTAAGACAACGGGAAGTGA
TACTGTTTTACCACCACTCGAGGTTGCAATCGCATTAGCGTTATCAGAAA
CTGAACGAAATGGCGGGCGTGTTCTTGGCCGCGCGACGACTCGCACGAGC
ACGCGAACGACAGCCAGTTCAAACACTAAGCCAAGGTAAAACACATTTTC
CTTAATCAGGTCTAAAGGctctaaaacttttaaaattatatttatctttt
tttgatttttctgaaaattagatTAATTTGATTAGTTAGCTGTGTGACCC
ATCTTTAAGGTACctacacaattatcattgtatACTGATTCTCTTTTAGA
TATGCTCAAGGTGATGGTTCCATTCCGAAAGCACCTCCATCGCGCGGCGC
ACCTGACGAACGTCATCCTCCAGGTAGCATGTACCCACCCCGTATGTCCT
CACGTGGGGAAGGTGGCCAACCACCATCTGGTTATCCTCCTAACTACCCA
CCACACCTTGGACCAAGACATCAACAAAATGTACGGTACCCATTCCATCA
TGACGCACGCACACACGGTGCCGCTTACCCACCGCCTCCACACCATCCAC
CACAACAAAGACGACAGCATTCACCTCCGGCCGAATTTCATCACCCATCG
TCACCTTCTTCATATCACAGGAATAGAGATAGGCGATACATGCACCTAGA
CTCCCCTTCCTCATCTAGATACTACCATCATGAAGGACCCCCTCCTCCCC
CAGGAGCACGTGGGTACTATTCACATCACGAAGACCGCTACCATGAGAAG
GAGGAACGTGACCCTCGTGATCGTCTTCCATCTTCGACAGCttccaaaga
aaaatatcaagacTATCATAGTGTATCTTTAGAACAGTCTCAATCTCAGT
CATCAGGGGGCTACCCACCCCATAAGAGGTCACTGCCACCTGATCATCCT
AATCGTCTACCACATGCAGAGGATTCAGAATACTCTCATGAAGGGCGGAA
AGAGGATGATTACTCGAGGTTACCATCGTCACAAGATAAACTAGCTCCTT
ATCGCATGTCTTCATCACAAATTCAACAGCATTCGCCCGTTGATTATATC
CAACCGCGCGAACGCGAAGAAGAATCCGCTTACCGCGGTGGGGAGGACCG
AGATCGTCCTCGGAACCCTTACTCGGCACCACCGAGAAGTGAGGAAGACC
ACCGAGCATTATTCCGAGGAAAACCATCAATCTCGTACGGCGATTATGGT
ACTACGAGTAAAACGAGTAGTCGACCGTCTTCCGACGTTAGTATGGTGCC
ACAAAATCGTGAATACAACAGAAGTATCCCTCCACCGGAAGCCACTTCTC
CATATCAACCACCTCAGCCGAGATCGAGTACAACTTCTTCAGAACCAGGC
GATTTCGCTTCGATGGTGGATAAAGACGCTCTTATTGAACCCCGCCCATC
CTCATCACCTCCACCCCCGCCACAGGCGACAGAGGATATAAATGAAGATA
ATGTGTATTCGGACGAAATTCCAATAGTAACTCCTAGCGATGATAACACT
TTGACTGTTCCTCAAAGTGCTGTTTCCTCTTGATAATCAATACCTTAACT
CTTTTGAATTAGAAAATGTTTTGTAAAGTCCTGCTGGAGTGCTTCTTTGA
GGATATAACACACTGTTGCTTAAAGTACTGATACTCGACTATGTGTATAT
TTCCTAGTTAGGTATAGCAAATTTCAGTgggattttagaaaaatgagaat
ttttctaCAATATTATATATTATCAGTATAGTTAGTTTAGTAGCCTTTTT
ATTATACATtttacttttaaactttttatatattatattttttctatttt
ttttttccggtgTGTCTGTCCAATTTATTTTCAGCCATATTTACATGtag
aaaggaaaaaaataaaattccggataaaatttttgaaccaaGATTTTGTC
cgaagtttttttttgggggTAGGATTTGTGTTTTGTGTTGTATGCTCATT
CAGCTAGAATCTTCCTTAGAAAAACGCCTTTTGTTCATCTTTAAAATTGT
cttttgttgacaaaatatgaaaaaaagttgatgctttctaattcgatttt
caagagagTTTCGATATTATCTAATAATGAATCGTATCGAATGGCATTAA
AGTCGAGTTACAGAGCGTCGTATTTCAATTTGTTCTTTAGTTTGTTTTGG
GTGtcactttgatttcaaaaatttggttTCATTGTTGACCAAAGTGTATG
CCAAACAATGAAGTATCTCCCCTTAAAGTTGTGTTTCCAGTTGACAAGAG
TTTTGCTTCGTGTGAAAATGCTCATATCGCGTTACTTTCCAGTTGAAGTT
GGTCTTTCTACGACATTTTatgcataatttttttaaatatattttattta
ggaAAACGTTTAGGTTCTTTCCACTAAAAGTGGATTTTAATCGCGAATGT
TGTCTTCATATAAGAAAGTTCATTGAACAAATGGGACTGTGTTGTGAACG
TCATGTGACATGGTGACGTCATCATATTACCATAAGTTGacaatgaaatt
ttttattgaaaataaataatttttatatgtggattattttttcttttgtt
tcatttaTCAACAATGCTATCTAATATTAATAATTAATGAATATATATTA
GTCGCTATCTTTTACTTTATATATTATAACCCATATGAAAAATTATCATT
AATATTATTGCTTATTTGTATTTGCCATTGTTTTCAACACAATTCTCGAT
GAGAAGTAGATTAATTACTGCCTCTAAAATTAATTCAGTGGTAGATAAAG
GCGAAGAGTGTCTTATAAAATAATCTAaagattgaaattattttattagc
TAAAATATTAGCCTCTTAAAATCAACAATACAGGGACCAAGAAActtcaa
attagagaaattaaGGGAGCCTTATGTTCATGGTTAAATTGCAGAAAAAC
TTGGAGCTCCGACTTAGATGAAGCCAATGATTGTTAGTTACAACTTTTAT
ATTCCTTGTGAGGAAATGCCCGTTCTCGGTTATAAATCCCCTGTATCTAC
CACCTAAGCTTTCTTGCCCCCATCTTCGGCACCCCAATTGACGCTTTAGT
TAGGACACGCCTTTAGTTCGCGTACATTAGAACGATAAGATACAACGTAC
ATTAGAACGATGAGATACCTTATCAGGAAACTTATTAACGATTTTCCTGG
TAAGAGCATATTAGCTGTCGATGcttaaaatgtgttttcatTTGATTAGT
AAGCCAATCAGATTGATTTGATCATAATGCTTGAATGCGAAATACATTGG
CTTACACCTCCTATGAAAACGTATTTTGAATGTTCTCTAGGTAGGCAATT
TGTAACTTTCCAGTTCATATATTAGTCAAGATATAGAACCCCGCCAACAA
TGActggaaaatatttgaatttttttaaaaacattatttttgctACAGTA
CAGTTAACATTTTAAGAAACGAATATTATACTACCTTTAATGtatttcat
tttacaagaatATTATCGTGGTTGTATATATTATCCTTGAAcgaagaaaa
ataactttacTATAATACTCCTAATATGCTATAATACTCATAAACAATTT
GTTTTACATTTATTTTAAACTCatataatacacgttttttttttataagg
aacacgtttataaggaactcgaggctggaaatggttcaaaaaataaggaa
ttgttaaggaactgctcaggctgagaataag Coding sequence (CDS) from alignment at sc0000303:16350..20780+ >TCONS_00018599 ID=TCONS_00018599|Name=TCONS_00018599|organism=Clytia hemisphaerica|type=CDS|length=5454bp|location=Sequence derived from alignment at sc0000303:16350..20780+ (Clytia hemisphaerica)
agaaatcaatttttttgtttactttttatccTAGATCTCCAAACAGAAAT
CAACAAATTACCACGAGTTCGCCAATTGTCAGAATCAACTGTAGAACGTC
TGATCACAGAACCTTCTCAGACTGATGCATCTTGGAAACATGCAAAACAA
GCCTACAGGTGTCCTTTGTGTGCcaaagtatttcctttcaaaagTAAACT
ACAAAGACACGTACTGGTACACACTGGAATTAAACCCTACAAGTGTACTG
TATGTGGACGCGGATTTACACAACAGATTGATCTTCAGCGTCACTTAACA
CGTCACACCGGTGAAAAGCCTTTCAAATGTCATCTCTGTAAAGCTCAGTT
CATACGTGCCGATAATTTACGTAAGCATTGTAAAGATGCTCATTACGTTA
GTATCGAAGAACCCATACGTAAAAGACGGCGTAAGACAACGGGAAGTGAT
ACTGTTTTACCACCACTCGAGGTTGCAATCGCATTAGCGTTATCAGAAAC
TGAACGAAATGGCGGGCGTGTTCTTGGCCGCGCGACGACTCGCACGAGCA
CGCGAACGACAGCCAGTTCAAACACTAAGCCAAGATATGCTCAAGGTGAT
GGTTCCATTCCGAAAGCACCTCCATCGCGCGGCGCACCTGACGAACGTCA
TCCTCCAGGTAGCATGTACCCACCCCGTATGTCCTCACGTGGGGAAGGTG
GCCAACCACCATCTGGTTATCCTCCTAACTACCCACCACACCTTGGACCA
AGACATCAACAAAATGTACGGTACCCATTCCATCATGACGCACGCACACA
CGGTGCCGCTTACCCACCGCCTCCACACCATCCACCACAACAAAGACGAC
AGCATTCACCTCCGGCCGAATTTCATCACCCATCGTCACCTTCTTCATAT
CACAGGAATAGAGATAGGCGATACATGCACCTAGACTCCCCTTCCTCATC
TAGATACTACCATCATGAAGGACCCCCTCCTCCCCCAGGAGCACGTGGGT
ACTATTCACATCACGAAGACCGCTACCATGAGAAGGAGGAACGTGACCCT
CGTGATCGTCTTCCATCTTCGACAGCttccaaagaaaaatatcaagacTA
TCATAGTGTATCTTTAGAACAGTCTCAATCTCAGTCATCAGGGGGCTACC
CACCCCATAAGAGGTCACTGCCACCTGATCATCCTAATCGTCTACCACAT
GCAGAGGATTCAGAATACTCTCATGAAGGGCGGAAAGAGGATGATTACTC
GAGGTTACCATCGTCACAAGATAAACTAGCTCCTTATCGCATGTCTTCAT
CACAAATTCAACAGCATTCGCCCGTTGATTATATCCAACCGCGCGAACGC
GAAGAAGAATCCGCTTACCGCGGTGGGGAGGACCGAGATCGTCCTCGGAA
CCCTTACTCGGCACCACCGAGAAGTGAGGAAGACCACCGAGCATTATTCC
GAGGAAAACCATCAATCTCGTACGGCGATTATGGTACTACGAGTAAAACG
AGTAGTCGACCGTCTTCCGACGTTAGTATGGTGCCACAAAATCGTGAATA
CAACAGAAGTATCCCTCCACCGGAAGCCACTTCTCCATATCAACCACCTC
AGCCGAGATCGAGTACAACTTCTTCAGAACCAGGCGATTTCGCTTCGATG
GTGGATAAAGACGCTCTTATTGAACCCCGCCCATCCTCATCACCTCCACC
CCCGCCACAGGCGACAGAGGATATAAATGAAGATAATGTGTATTCGGACG
AAATTCCAATAGTAACTCCTAGCGATGATAACACTTTGACTGTTCCTCAA
AGTGCTGTTTCCTCTTGAagaaatcaatttttttgtttactttttatccT
AGATCTCCAAACAGAAATCAACAAATTACCACGAGTTCGCCAATTGTCAG
AATCAACTGTAGAACGTCTGATCACAGAACCTTCTCAGACTGATGCATCT
TGGAAACATGCAAAACAAGCCTACAGGTGTCCTTTGTGTGCcaaagtatt
tcctttcaaaagTAAACTACAAAGACACGTACTGGTACACACTGGAATTA
AACCCTACAAGTGTACTGTATGTGGACGCGGATTTACACAACAGATTGAT
CTTCAGCGTCACTTAACACGTCACACCGGTGAAAAGCCTTTCAAATGTCA
TCTCTGTAAAGCTCAGTTCATACGTGCCGATAATTTACGTAAGCATTGTA
AAGATGCTCATTACGTTAGTATCGAAGAACCCATACGTAAAAGACGGCGT
AAGACAACGGGAAGTGATACTGTTTTACCACCACTCGAGGTTGCAATCGC
ATTAGCGTTATCAGAAACTGAACGAAATGGCGGGCGTGTTCTTGGCCGCG
CGACGACTCGCACGAGCACGCGAACGACAGCCAGTTCAAACACTAAGCCA
AGATATGCTCAAGGTGATGGTTCCATTCCGAAAGCACCTCCATCGCGCGG
CGCACCTGACGAACGTCATCCTCCAGGTAGCATGTACCCACCCCGTATGT
CCTCACGTGGGGAAGGTGGCCAACCACCATCTGGTTATCCTCCTAACTAC
CCACCACACCTTGGACCAAGACATCAACAAAATGTACGGTACCCATTCCA
TCATGACGCACGCACACACGGTGCCGCTTACCCACCGCCTCCACACCATC
CACCACAACAAAGACGACAGCATTCACCTCCGGCCGAATTTCATCACCCA
TCGTCACCTTCTTCATATCACAGGAATAGAGATAGGCGATACATGCACCT
AGACTCCCCTTCCTCATCTAGATACTACCATCATGAAGGACCCCCTCCTC
CCCCAGGAGCACGTGGGTACTATTCACATCACGAAGACCGCTACCATGAG
AAGGAGGAACGTGACCCTCGTGATCGTCTTCCATCTTCGACAGCttccaa
agaaaaatatcaagacTATCATAGTGTATCTTTAGAACAGTCTCAATCTC
AGTCATCAGGGGGCTACCCACCCCATAAGAGGTCACTGCCACCTGATCAT
CCTAATCGTCTACCACATGCAGAGGATTCAGAATACTCTCATGAAGGGCG
GAAAGAGGATGATTACTCGAGGTTACCATCGTCACAAGATAAACTAGCTC
CTTATCGCATGTCTTCATCACAAATTCAACAGCATTCGCCCGTTGATTAT
ATCCAACCGCGCGAACGCGAAGAAGAATCCGCTTACCGCGGTGGGGAGGA
CCGAGATCGTCCTCGGAACCCTTACTCGGCACCACCGAGAAGTGAGGAAG
ACCACCGAGCATTATTCCGAGGAAAACCATCAATCTCGTACGGCGATTAT
GGTACTACGAGTAAAACGAGTAGTCGACCGTCTTCCGACGTTAGTATGGT
GCCACAAAATCGTGAATACAACAGAAGTATCCCTCCACCGGAAGCCACTT
CTCCATATCAACCACCTCAGCCGAGATCGAGTACAACTTCTTCAGAACCA
GGCGATTTCGCTTCGATGGTGGATAAAGACGCTCTTATTGAACCCCGCCC
ATCCTCATCACCTCCACCCCCGCCACAGGCGACAGAGGATATAAATGAAG
ATAATGTGTATTCGGACGAAATTCCAATAGTAACTCCTAGCGATGATAAC
ACTTTGACTGTTCCTCAAAGTGCTGTTTCCTCTTGAagaaatcaattttt
ttgtttactttttatccTAGATCTCCAAACAGAAATCAACAAATTACCAC
GAGTTCGCCAATTGTCAGAATCAACTGTAGAACGTCTGATCACAGAACCT
TCTCAGACTGATGCATCTTGGAAACATGCAAAACAAGCCTACAGGTGTCC
TTTGTGTGCcaaagtatttcctttcaaaagTAAACTACAAAGACACGTAC
TGGTACACACTGGAATTAAACCCTACAAGTGTACTGTATGTGGACGCGGA
TTTACACAACAGATTGATCTTCAGCGTCACTTAACACGTCACACCGGTGA
AAAGCCTTTCAAATGTCATCTCTGTAAAGCTCAGTTCATACGTGCCGATA
ATTTACGTAAGCATTGTAAAGATGCTCATTACGTTAGTATCGAAGAACCC
ATACGTAAAAGACGGCGTAAGACAACGGGAAGTGATACTGTTTTACCACC
ACTCGAGGTTGCAATCGCATTAGCGTTATCAGAAACTGAACGAAATGGCG
GGCGTGTTCTTGGCCGCGCGACGACTCGCACGAGCACGCGAACGACAGCC
AGTTCAAACACTAAGCCAAGATATGCTCAAGGTGATGGTTCCATTCCGAA
AGCACCTCCATCGCGCGGCGCACCTGACGAACGTCATCCTCCAGGTAGCA
TGTACCCACCCCGTATGTCCTCACGTGGGGAAGGTGGCCAACCACCATCT
GGTTATCCTCCTAACTACCCACCACACCTTGGACCAAGACATCAACAAAA
TGTACGGTACCCATTCCATCATGACGCACGCACACACGGTGCCGCTTACC
CACCGCCTCCACACCATCCACCACAACAAAGACGACAGCATTCACCTCCG
GCCGAATTTCATCACCCATCGTCACCTTCTTCATATCACAGGAATAGAGA
TAGGCGATACATGCACCTAGACTCCCCTTCCTCATCTAGATACTACCATC
ATGAAGGACCCCCTCCTCCCCCAGGAGCACGTGGGTACTATTCACATCAC
GAAGACCGCTACCATGAGAAGGAGGAACGTGACCCTCGTGATCGTCTTCC
ATCTTCGACAGCttccaaagaaaaatatcaagacTATCATAGTGTATCTT
TAGAACAGTCTCAATCTCAGTCATCAGGGGGCTACCCACCCCATAAGAGG
TCACTGCCACCTGATCATCCTAATCGTCTACCACATGCAGAGGATTCAGA
ATACTCTCATGAAGGGCGGAAAGAGGATGATTACTCGAGGTTACCATCGT
CACAAGATAAACTAGCTCCTTATCGCATGTCTTCATCACAAATTCAACAG
CATTCGCCCGTTGATTATATCCAACCGCGCGAACGCGAAGAAGAATCCGC
TTACCGCGGTGGGGAGGACCGAGATCGTCCTCGGAACCCTTACTCGGCAC
CACCGAGAAGTGAGGAAGACCACCGAGCATTATTCCGAGGAAAACCATCA
ATCTCGTACGGCGATTATGGTACTACGAGTAAAACGAGTAGTCGACCGTC
TTCCGACGTTAGTATGGTGCCACAAAATCGTGAATACAACAGAAGTATCC
CTCCACCGGAAGCCACTTCTCCATATCAACCACCTCAGCCGAGATCGAGT
ACAACTTCTTCAGAACCAGGCGATTTCGCTTCGATGGTGGATAAAGACGC
TCTTATTGAACCCCGCCCATCCTCATCACCTCCACCCCCGCCACAGGCGA
CAGAGGATATAAATGAAGATAATGTGTATTCGGACGAAATTCCAATAGTA
ACTCCTAGCGATGATAACACTTTGACTGTTCCTCAAAGTGCTGTTTCCTC
TTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018599-exon-sc0000303-1491911889:16350..16593 | TCONS_00018599-exon-sc0000303-1491911889:16350..16593 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1510915933:16350..16593 | TCONS_00018599-exon-sc0000303-1510915933:16350..16593 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1575043694:16350..16593 | TCONS_00018599-exon-sc0000303-1575043694:16350..16593 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1491911889:16893..17234 | TCONS_00018599-exon-sc0000303-1491911889:16893..17234 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1510915933:16893..17234 | TCONS_00018599-exon-sc0000303-1510915933:16893..17234 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1575043694:16893..17234 | TCONS_00018599-exon-sc0000303-1575043694:16893..17234 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1491911889:17399..20780 | TCONS_00018599-exon-sc0000303-1491911889:17399..20780 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1510915933:17399..20780 | TCONS_00018599-exon-sc0000303-1510915933:17399..20780 | Clytia hemisphaerica | exon |
| TCONS_00018599-exon-sc0000303-1575043694:17399..20780 | TCONS_00018599-exon-sc0000303-1575043694:17399..20780 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303 | supercontig | sc0000303:16350..20780 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00018599 vs. Swiss-Prot (Human)
Match: Z705A (Zinc finger protein 705A OS=Homo sapiens GN=ZNF705A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.919e-17 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 3
Query: 150 QAYRCPLCAKVFPFKSKLQRHVLVHTGIKPYKCTVCGRGFTQQIDLQRHLTRHTGEKPFKCHLCKAQFIRADNLRKH 380
++Y+C LC K + +L+RH + HTG +PY C +CG+ FTQ L+RH HTGE+P+KCH C FI++ NLR+H
Sbjct: 170 KSYQCNLCEKAYTNCFRLRRHKMTHTGERPYACHLCGKAFTQCSHLRRHEKTHTGERPYKCHQCGKAFIQSFNLRRH 246
The following BLAST results are available for this feature:
|
