TCONS_00018331 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018331
Unique NameTCONS_00018331
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018331 ID=TCONS_00018331|Name=TCONS_00018331|organism=Clytia hemisphaerica|type=transcript|length=3027bp
gtTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTCTTTTATT
CTTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAACCAGATAC
CAAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCAATTCACA
AATCGCAATCTGTCTCTACAATTTAAGAGACTTCGATAATTCAGTGGAAT
ACTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACATATTGAT
GTGTATTCAAATATCTTATACATCCAGgAGGACAGACCAGAATTGAGTCA
TTTAGCACATCACGTTTGTAAAGTGGACAAATATAGAACTGAATCGTGTG
TTGTGATAGGAAATTATTACAGTTTGCGAGGTGATCATGACAAAGCAGTG
ATGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTGCTGCATG
GACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCTGCTGCTA
TTTTATCTTACAGAAAAGCCACTGgaGTGAACCCTCACGACTTTCGTGGC
TGGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTTTTTATTC
GCTCTGCTATTTTAAAGAAGCTCAAAAATTAAGACCGAACGATCCTCGAA
TGTTGATTGCACTTGGAGACACTTACAACACGATCGAGAACCTCAATGAA
GCCAAAAAGtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAGAAGGCCA
AGCTATCGTCAAACTAGGAAGACTGCAAGAACAATGTAATGAGATGGAGG
AAGCAGCTTTATCCTACACAAAATATATCAAACGCCTCGAAAACTCTGTT
cACATCAGTGAAGACATAGCACACGCGTGTTTGTTTCTAGCAAGGCATCA
TTTAGACTTGAAGCAATATGATGAAGCGACCACTTATGCCAGGAAAGCCA
TGGAGTACACCGAGAGTCGTGACGAAGGAAAAACATTGATGTTCGAAATC
AGTCAGATGAGCTCAAGTGTGAAGTGAATCAAAGCTAATTCAAGTGTGAA
GTCACTCAAGGTTGGATTCCCTTCGTTAGAAGGTGAAGCGGATGTAGGTG
AGAGCTCGGGCGATTCTGTGAATGAGGACGTTTCACGTCGATTACGATGA
GCTAGTGGTGAAGACTTTCTTAGCATAATGCGTGAAGAACCTTTTGCTAA
CATGCTGGAAGTGGAAATATTACCATGACTTGTTCTTTCTTTTTCCATGT
TTTTCAATGTatcaaataatattttatttttagttttttttcacaaCGTC
AATTTTTCGAAACAGTCTAACTGCTGATTCGGTGTCGAAAGTTTTcaata
attataaattttgatgaattttttgtatAGTGTTCAACCACtgctcattt
tttttctttccaacagTGAAGAATTGttagataatgaataatgaatttCT
TTTCTCCATACATTTCTGACACCCATATAAACGTAATCAATTTATCGGTT
GCCCtcttgattattttgaatatgagctatttataatttcttaccccttt
tctgtgtttttttatattatgttttttcttctcGAAATCACTTCACTTTT
GGGCGACCGTTGAGCCGTAGTGTTTTGATTGCGTTCAAAGGATTTTCGTT
AGATAGCCTGTGTAGCGACATAATAAACAATGGCTCATCGCCCACGCGCC
TACGGTCTAACGGCTGAAGTAAACAGTAAGATCAAGAGTAAATATGAACT
AGAAGATGAAAAGAAAGTACTTAGATGGATTGCAGAGGTGTTGTCCGACC
GCTCAATGTTCGATGGTGTAGAAGGCGAAGAAGCTGTGCATCAGGTATTG
AAAGATGGACTCATTCTGTGCAAAGTTATCAATATGCTGTACCCAGGCTC
CGTACGCAAACTAAACAAAATGAAACAACCCTTCATGATGATGGAGAATA
TCTCAGCTTTCTTGGACGCTTGTGTAGCCTATGGTGTCCGCCGCGGTGAT
TTATTCCAAACGGTTGATTTGTATGAACGTCAAAATATGGTTTCTGTCAT
CCAGGGTATCTTCGCGCTCGGCCGTAAAGCGCAGACCAATGGTTACCGAG
GCGCCGTTCTGGGTCCCAAAGAAGCCTCAGAAAACCACCGTGAATTCACG
TATGATCAAATGAACGAAGGGTTTAATATCATAGGCTTACAAATGGGATC
CAACAAAGGCGCAAATCAATCGGGAGTCAATTTTGGGAAGTCTAGGTTTA
TTATGGACTAACTTTTAatattgtaatttttcttttgtatttcatTTATT
TGGCGCTGCTTTTCATAGTATTCcaagggaaattttttttgaaatctgca
ATCGTAATCCAacgatattttcaatatttttttgaaattttgtgaaaaat
gatACCGATTATTTTTACCGAGAATATTCGAACAAATTTAATTCCGGGGT
Tccatagtctagcaagctagacgactaatttatacatagtagaaataaag
taaaaagtaatgaatggaacaattttagtcgtctagaaacctttgtgcac
taactccaaacaaaagaaaagtgtcaatattgcaattataattttttcct
gctcaaaataattcttgagaaaaaagaatatgtgtggatttgtgtattga
aagtttttcatttgagttgatttcgttttgagagtttgttgttgcttgat
aaattgttttctNNattcttccagtcgtttatacaaactaaatcccgtat
tattattattagtattggtattattagtattacacgcattataaacgact
ccagtctaggggTTCCATAATATAGTAAGGAAGAATTTTGCGATATTTTT
AGTTAGAGTTTTTATTATTTATGTCTTTATGCTATACGTAACtgtcaaaa
aataattaatttacattaaaatttaTCAGCATTATTTATTGCAAGGTTTA
TTTTGCTGGCTACTTAGTTACTTACAGACTGAAagtataaatttattttt
gtctgaaaattATCCTTTATCGTCGCT
Run BLAST on NCBI

protein sequence of TCONS_00018331-protein

>TCONS_00018331-protein ID=TCONS_00018331-protein|Name=TCONS_00018331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
LKELKVPKHWMSEFFYSSVELELHMAEEALTRYQDISAAGFNGSSYVNSQ
IAICLYNLRDFDNSVEYFRELYDADPEMLEHIDVYSNILYIQEDRPELSH
LAHHVCKVDKYRTESCVVIGNYYSLRGDHDKAVMYFKQALRLNSNYVAAW
TLLGHEYVELKNTSAAILSYRKATGVNPHDFRGWYGLGQTYELLNMPFYS
LCYFKEAQKLRPNDPRMLIALGDTYNTIENLNEAKKCFLRAVRLGDSEGQ
AIVKLGRLQEQCNEMEEAALSYTKYIKRLENSVHISEDIAHACLFLARHH
LDLKQYDEATTYARKAMEYTESRDEGKTLMFEISQMSSSVK
Run BLAST on NCBI

transcript from alignment at sc0000297:198..9389+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018331 ID=TCONS_00018331|Name=TCONS_00018331|organism=Clytia hemisphaerica|type=transcript|length=9192bp|location=Sequence derived from alignment at sc0000297:198..9389+ (Clytia hemisphaerica)
gtTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTCTTTTATT
CTTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAACCAGATAC
CAAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCAATTCACA
AATCGCAATCTGTCTCTACAATTTAAGAGGTAACTAAATTGGACCGACAA
TAGCCTGTTCTTGCAGGACCATTCGAATCATTACCAACTCCAATCCAGCA
AAAGCTCACAATTAGGTCTTTATTCCCTCAAAAGTTATtaagatttttgt
aaattttgagattttcgaATCTAAAGTTTTGATACAGTCCaaaaaacgcg
tccttataatattccactcctgtttatcttttcaacaagcacaaaaccta
GGCTAGACTACACAAAACTGTTATCCAGGCGCCGCGGCTCGACATTTTAA
GTGGTCGGGCCACATaatatagtgtctaaggaggcgccaccatggttggc
gccgacgggctagaaaattttgcgaatttcacTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTT
CTTGAAGAAGATATCTTCacaaatccataaaatttgttcCAAAAGAGAAA
TTTAGTCAGCAAATTTATTAATGTTAGACTGTGTTTTGTAGAGCCTTAAA
TGATAATCTATACTGTAAAATATATTCATACAATGATTAGTCAAGATGGA
TGAAATATCTGATATAAAAAGAAGTTTACAAATCGTTCTCTGTAAATTTG
CCGAAAATATTTAGTCGCTCAGGTTGAACTCTAACAAACTCATTGGCAAT
ATCAATCAGAGATAGTGAGTCTCTAATGTTTCTTTATGTTCGTCatagtt
caattttttttctaactgACTTTTCAAAACCGGCCCTACCGCTGCCGCGG
CGCctgtagactagtaaaccacgtcgttgtatttcgctgcagattaaact
ttcaatgggatctatttttttatatgttttctgaatacaactgtctttcc
aatccactctcccgcggcaatttctatattttataagaactctttattat
ataagcactattcccgcgttcctgtgtccaaggaaagacagacgcttgct
agtctacgGCGCCTGTTatctagacgatgttatcgtccgttacagtgata
gtaaaggcgggaaaaaatggcggtatggcgttatggcggtatacggaaaa
aaatcggcgggagagtttcgaagaagtTTTCGAagactaccttattggaa
ctaattttcgcgggttttaattttagcgtttttcgcggtttttcgtcaaa
atcgcgaaaatttgatcccgcgaaaaattttaNNNNNNNNNNNNNNAgag
ttgaaaaccgcgaaaattaattcccgcgaaatacaattttttccaatttt
atcgaaaaatttgaaaaatccctaggaaaatgaaagaaatttgtccaaaa
aagggcaaaaccgcgaaaattaaaacccgccaaaattccagaatggaaaa
aaccgcgaaaattaaaacccgcgaaatgcaatttttcggatttttttttt
cgaccgggaaaattagttcccgcgaaaattagttccaataaggtagcaAC
TTTACCGACTGTAacctcttttcggcaaaaaaacccgtttgtgaattttc
ttcggctttgggcttttttctttgatagtgattcgtcttagactataaca
tagtctactgttatctaattcgaattctatcaaaagttatagccgtTTTG
GGAGTTTtattaaaatcagaaaaaagtgaaaaactatACGAGTGCTTGAA
GGTAGTTAGTGACTTCAGTGGAGAGATTCTAATAAAGTTCTTACCAAGAA
ACAATAAAGTTTccataaaaatttttttgtaagaacgtAAGAACAAGATG
AAGTTTCAACTTTTCCTTTACCTCTCATTAGACTTCGATAATTCAGTGGA
ATACTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACATATTG
ATGTGTATTCAAATATCTTATACATCCAGGTGTGtgttgattgaaatttg
atttttcttttgttttcctcatttgttttgaagatttctggAAAAATGTT
ATTTGATAACGGGCGGACACCAAAAACAAGAAAGactcaaaaattacaaa
atctatcGAAAAGTTAGGGGACACCCGGGTTTGAACCAgggacctctcga
tctgcagtcgaatgctctaccactgagctatatccccatGATGTGATGTT
ATATCTCAGAGATAAAAGATATTAAACACTAGTATCATACTAAAGCCTGT
TCAATTCACACACTGGCAATCTTAcacgtttatttactttttcaggAGGA
CAGACCAGAATTGAGTCATTTAGCACATCACGTTTGTAAAGTGGACAAAT
ATAGAACTGAATCGTGTGTTGTGATAGGTAAATTATAGACACTTTTCCAA
TTCTATCCAGAATCATTATGTCATTCACTACAAGACCATTGCATTATGTA
GACACACCCTAggtaaaaacatccaaattttttacctgattgttttttaa
agtttagaCATATGGTTtcgaattttctgaaaattgttaaaaaggaaaat
gaatcTATTCGGCGACTGTTGCCAACAATCCCCCAAATATCCTTTAAACT
TGAATTTTTAAATGTGGCAAATTTTTTGCTCTTTCCCTTTCTATTCAAAC
GATTACAGGAAATTATTACAGTTTGCGAGGTGATCATGACAAAGCAGTGA
TGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTGCTGCATGG
ACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCTGCTGCTAT
TTTATCTTACAGAAAAGCCACTGGTgaggatttctttttttataataaga
tAATACAGTGTTAGATAATAAAGtgtattttttaaacattcgaACTATAA
AGACAATGCAGTGTCTCTTTAAACATTCAAATTGAAGACAATGCAGTGTC
TCTTTAAAAATTCGAACCGAAGACATTTGTTGTGTCGTCTCGTTAACTTT
TTATGAAGTCTTCTAGNcttgagttcgggaccactacGGTGCAGTTGTCT
ATGTCGATCaagcgtccacactaagctcagtgtcaacatggttatcatgc
aGGAATGtgagatacaccaggttcgataatgaagaacgtaccggcccagg
gcggaaacgcagcaggcaaaagttctcgcAGTGAGCAGTAGTAGGATAGC
GCCTGTGAATAGATGGTGTATCGTAGCCCGCGCAAGATAGTCGAACGAAG
CTTTTTCTCTCCACTTGTTGTCTTTCTTTACTCCTTCTTCCTATTTGAAA
CCTTAACATTCGAGTATGACAACCAGTTCAGAAGTTGCCAACCGCACTCT
TTCACTTTATCCTCATAAACAGCCAACTGCTGAAGATCCTCTCACTTTTT
AAAGTTTAGCCaggtctttttctttctttaggaGTGAACCCTCACGACTT
TCGTGGCTGGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTT
TTTATTCGCTCTGCTATTTTAAAGAAGCTCAAAAATTAAGGTAAGTCGGA
TGATTTTTCCAAGCACCAAATGTACGACACGAAAAAAAGCACGAAGATGC
GGAAAAGATTAGGGGACACCCGGGTTTGAACCAgggacctctcgatctgc
agtcgaatgctctaccactgagctatatccccgcTATCTATACTGCTGAA
AATCACAATCAGTATTAAAAACTAACTACACTTCCTCTATGAATTTGATC
TCCATAGACCGAACGATCCTCGAATGTTGATTGCACTTGGAGACACTTAC
AACACGATCGAGAACCTCAATGAAGCCAAAAAGGTATCTCCATCCTTTCA
CTTTTAAATCGTAATGAAAATAACCGAAGGATAGCTAGTGGGAGCTAAGT
CTCTTGAAGAAAGTATAGAGATATTTAGGAAATATCCTTCCTGAAAgaga
attttagaaaaatcgCGTGGcgttatttttttagaaaaagagaAAGCTTT
TAGTAGAGCTGTCAATCATGGGATCTTACTGTCAATCAAAACtctattgt
tttttaattttcagtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAGAA
GGCCAAGCTATCGTCAAACTAGGAAGGTATAGTGCACATCTATGTAAAAT
GAAACAGTTATAACGGGATAACGGGGTTATTACATTATGAAATTTACCAA
CCTAAATTATTGCCTTCCCATGTTTTCAATACAACTTTCCCATGTTTTTA
TTAGACTGCAAGAACAATGTAATGAGATGGAGGAAGCAGCTTTATCCTAC
ACAAAATATATCAAACGCCTCGAAAACTCTGTTGTAAGTTCTAAAATATT
GTGTACAATAAAATACCCAGAGTTGAATTcatttcaaaagctttttcttc
ttttttcgcatgttaaatattttaagcttttacaaattatactttaaaaa
atatttattttatttcccACTTGAGTTTGATAAAGTTTTATCCGACGACT
GTTTTGTGACATCACTTTTCATAACTCCCCCATCCAAGTCAATCAACATT
TCTTGTAGCACGTGTATGTAGCTTGATGCTTGAGTCAACATTTCTAAACG
TGTTGCTCGCTTTTGTTGTTGTGATAAAACTGGCAAAGAATCTTGTAATT
CTTCGTAAGCTTTTCGTTCTGCATCTCTCAATTTACCATATCCTCCACGT
TTGAGCGAAGGTAACTTTGTTgattttgatgttgtttcttgCTGCATTTT
TAAAGATCGGTTGCTCCCCTCCTCTCGTCTCATTTGTCTTTTTGCTAGAG
CTGTAAAGATTTTTCTTTCCATTtcctatttttatatttttacgaCCATG
AAATCGACAACATGAAATGAATATTTCGCAATAAAAGAGACTGattgtgt
tttgttttcaattactCAATTGTCAATCGAATATATtttgattcgaatgt
tttgatcacgCGTTcgaaccactgacctttatataacgaATCATTTAAAA
GGAACTCGTTCGAATGTTATGAATGATGTCACTTTGAGATTCGATTCGAC
TTTTTAACAAGAATTTGAATGAATGTGTTGTATCTGTTGTatctttttta
ttgtatttttcttcatttcagcACATCAGTGAAGACATAGCACACGCGTG
TTTGTTTCTAGCAAGGCATCATTTAGACTTGAAGCAATATGATGAAGCGA
CCACTTATGCCAGGAAAGCCATGGAGTACACCGAGGTAGGGATTTTAATG
AGTGATGTTGTtcatatacacgcttttttttgtaagaatggtgtttttcc
aatttatcatgaatgttcttaactttttgggaaaaatcatcctgaaacaT
TCTtgcggtattcttaggttttgaAACCCAGCCAAAATCTAGTATGTAAT
ACATACCTCAAGCAAAGATATAGTGTCTATCGATCCCTATGCTATGTCAG
GCTCGTATTAAGATTAGCCTTCTATTgctctcaaacaatagagctatTTC
TTGGGTTTtgggtaccaaaaactgagcctgcatatacTTGTAAAccttat
gcttataaaagaaaaaacatttaatggtgaaatgctctaaaaatggcatt
cttaggttcagttgccagATTCTATGTTGCCGTTAtatttaccatattct
taatttttggccgatttcatcataaatattcttataaagtatattacAGG
CCATTCGGCCTGTTCAAAAAAAGGCTTGATTCCGTTCTTCCTTTAACCGT
AGCATGTTTGTGTGTacattaaaagaagaaattttggcaggaatttaatt
tggcggatggccgaaaacgTTTTTTCAGAGGGNagaagaaattttggcag
gaatttaatttggcggatggccgaaaaagttttttcagaggaaatttaat
ttggcggttaacttgaaaaattaaacttggcggatgaaggacatttttgt
ccaaaaaacgtCATTAAAAAAGGatttgggggaataaatagaTAGGGCaa
tctaaatttggcgggaatttaatttggcggatgacggtaaaaataaaatt
tgccgggaacttaatttggcggattttgaccaaatccgccgaatccgcca
aattaagttcccgccaataTTTCTTCTCCCGCTAATCTGAACCTCTTTTG
TTCGaacctttctataattcgaactaattctcggTTCCCGTGAAAGGGAA
AGCCTCGTAAACTACTTTCTATAACTATAATCTTTCTGCAATTCGAATAA
ATTAGAATTCCCGTTCGacttcgaattagcgagagttaacTGTATGGTGt
gttttctgcgacggagacggctAGCTTCTGACTTGTCTAGATTCTGATTG
ACTGAGGACGACCGTAAATCAGCGCTTTTACCATTGATTTTAAACCCCCA
AAGTGGGTAGAGatgaatctctaacctttctcaagcaagcaAGAAGCCTG
AAGATTTGCACGCATTTAGAATGAGGGATTGAATCTagccctttctttgt
ttttaagcagcacatttttcgaaatctagcgataggttttactttcaata
tggagtttgtgtgaaaaccacacgGGTCATGCGCTTTGGATGGGAAATAT
GtagtttcatttcccatccaggagttctGGGTCTGGCCCCTTCGGGGTTT
TGGAATCATTGACTaataccgtcctcgattttgcgggtaaAAACTGCGGT
TTATACAAAATCACTTCAGAGACTCCACCGtcctcaaataaaaaacttaT
AATAAGAACCTGCTCGTGAAACGCTCCCCGAGGTATAAGCATAGACAGAG
ACAACCTTTTGGTAAACAacaatgtttctttttttctctgacAGAGTCGT
GACGAAGGAAAAACATTGATGTTCGAAATCAGTCAGATGAGCTCAAGTGT
GAAGTGAATCAAAGCTAATTCAAGTGTGAAGTCACTCAAGGTTGGATTCC
CTTCGTTAGAAGGTGAAGCGGATGTAGGTGAGAGCTCGGGCGATTCTGTG
AATGAGGACGTTTCACGTCGATTACGATGAGCTAGTGGTGAAGACTTTCT
TAGCATAATGCGTGAAGAACCTTTTGCTAACATGCTGGAAGTGGAAATAT
TACCATGACTTGTTCTTTCTTTTTCCATGTTTTTCAATGTatcaaataat
attttatttttagttttttttcacaaCGTCAATTTTTCGAAACAGTCTAA
CTGCTGATTCGGTGTCGAAAGTTTTcaataattataaattttgatgaatt
ttttgtatAGTGTTCAACCACtgctcattttttttctttccaacagTGAA
GAATTGttagataatgaataatgaatttCTTTTCTCCATACATTTCTGAC
ACCCATATAAACGTAATCAATTTATCGGTTGCCCtcttgattattttgaa
tatgagctatttataatttcttaccccttttctgtgtttttttatattat
gttttttcttctcGAAATCACTTCACTTTTGGGCGACCGTTGAGCCGTAG
TGTTTTGATTGCGTTCAAAGGATTTTCGTTAGATAGCCTGTGTAGCGACA
TAATAAACAATGGCTCATCGCCCACGCGCCTACGGTCTAACGGCTGAAGT
AAACAGTAAGATCAAGAGTAAATATGAACTAGAAGATGAAAAGAAAGTAC
TTAGATGGATTGCAGAGGTAAAGACATTTTCTTCCTTACATCTTTTCTGG
CTGAACATTATTTGAATACGGATTTCTCCGCCCTACTTTCTATCATTAAT
TTTACTTGTCAACAACTTAACATCTTTTCTTTTAACATGTTTATTCCTCA
AGGTGTTGTCCGACCGCTCAATGTTCGATGGTGTAGAAGGCGAAGAAGCT
GTGCATCAGGTATTGAAAGATGGACTCATTCTGTGCAAAGTTATCAATAT
GCTGTACCCAGGCTCCGTACGCAAACTAAACAAAATGAAACAACCCTTCA
TGATGATGGAGAATATCTCAGCTTTCTTGGACGCTTGTGTAGCCTATGGT
GTCCGCCGCGGTGATTTATTCCAAACGGTTGATTTGTATGAACGTCAAAA
TATGGTTTCTGTCATCCAGGGTATCTTCGCGCTCGGCCGTAAAGCGCAGA
CCAATGGTTACCGAGGCGCCGTTCTGGGTCCCAAAGAAGCCTCAGAAAAC
CACCGTGAATTCACGTATGATCAAATGAACGAAGGGTTTAATATCATAGG
CTTACAAATGGGATCCAACAAAGGCGCAAATCAATCGGGAGTCAATTTTG
GGAAGTCTAGGTTTATTATGGACTAACTTTTAatattgtaatttttcttt
tgtatttcatTTATTTGGCGCTGCTTTTCATAGTATTCcaagggaaattt
tttttgaaatctgcaATCGTAATCCAacgatattttcaatatttttttga
aattttgtgaaaaatgatACCGATTATTTTTACCGAGAATATTCGAACAA
ATTTAATTCCGGGGTTccatagtctagcaagctagacgactaatttatac
atagtagaaataaagtaaaaagtaatgaatggaacaattttagtcgtcta
gaaacctttgtgcactaactccaaacaaaagaaaagtgtcaatattgcaa
ttataattttttcctgctcaaaataattcttgagaaaaaagaatatgtgt
ggatttgtgtattgaaagtttttcatttgagttgatttcgttttgagagt
ttgttgttgcttgataaattgttttctNNattcttccagtcgtttataca
aactaaatcccgtattattattattagtattggtattattagtattacac
gcattataaacgactccagtctaggggTTCCATAATATAGTAAGGAAGAA
TTTTGCGATATTTTTAGTTAGAGTTTTTATTATTTATGTCTTTATGCTAT
ACGTAACtgtcaaaaaataattaatttacattaaaatttaTCAGCATTAT
TTATTGCAAGGTTTATTTTGCTGGCTACTTAGTTACTTACAGACTGAAag
tataaatttatttttgtctgaaaattATCCTTTATCGTCGCT

Coding sequence (CDS) from alignment at sc0000297:198..9389+

>TCONS_00018331 ID=TCONS_00018331|Name=TCONS_00018331|organism=Clytia hemisphaerica|type=CDS|length=10260bp|location=Sequence derived from alignment at sc0000297:198..9389+ (Clytia hemisphaerica)
tTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTCTTTTATTC
TTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAACCAGATACC
AAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCAATTCACAA
ATCGCAATCTGTCTCTACAATTTAAGAGACTTCGATAATTCAGTGGAATA
CTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACATATTGATG
TGTATTCAAATATCTTATACATCCAGgAGGACAGACCAGAATTGAGTCAT
TTAGCACATCACGTTTGTAAAGTGGACAAATATAGAACTGAATCGTGTGT
TGTGATAGGAAATTATTACAGTTTGCGAGGTGATCATGACAAAGCAGTGA
TGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTGCTGCATGG
ACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCTGCTGCTAT
TTTATCTTACAGAAAAGCCACTGgaGTGAACCCTCACGACTTTCGTGGCT
GGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTTTTTATTCG
CTCTGCTATTTTAAAGAAGCTCAAAAATTAAGACCGAACGATCCTCGAAT
GTTGATTGCACTTGGAGACACTTACAACACGATCGAGAACCTCAATGAAG
CCAAAAAGtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAGAAGGCCAA
GCTATCGTCAAACTAGGAAGACTGCAAGAACAATGTAATGAGATGGAGGA
AGCAGCTTTATCCTACACAAAATATATCAAACGCCTCGAAAACTCTGTTc
ACATCAGTGAAGACATAGCACACGCGTGTTTGTTTCTAGCAAGGCATCAT
TTAGACTTGAAGCAATATGATGAAGCGACCACTTATGCCAGGAAAGCCAT
GGAGTACACCGAGAGTCGTGACGAAGGAAAAACATTGATGTTCGAAATCA
GTCAGATGAGCTCAAGTGTGAAGTGAtTGAAAGAGCTGAAAGTACCGAAA
CACTGGATGAGTGAATTCTTTTATTCTTCAGTGGAGTTGGAACTTCACAT
GGCGGAAGAAGCGCTAACCAGATACCAAGACATCAGCGCTGCTGGTTTTA
ACGGTAGTTCATACGTCAATTCACAAATCGCAATCTGTCTCTACAATTTA
AGAGACTTCGATAATTCAGTGGAATACTTTCGCGAGCTATACGACGCTGA
TCCAGAAATGTTGGAACATATTGATGTGTATTCAAATATCTTATACATCC
AGgAGGACAGACCAGAATTGAGTCATTTAGCACATCACGTTTGTAAAGTG
GACAAATATAGAACTGAATCGTGTGTTGTGATAGGAAATTATTACAGTTT
GCGAGGTGATCATGACAAAGCAGTGATGTATTTCAAACAAGCGCTGAGGT
TGAATTCGAATTACGTTGCTGCATGGACACTCCTTGGTCATGAATATGTA
GAACTTAAAAATACTTCTGCTGCTATTTTATCTTACAGAAAAGCCACTGg
aGTGAACCCTCACGACTTTCGTGGCTGGTATGGACTTGGACAAACTTACG
AACTTTTGAATATGCCTTTTTATTCGCTCTGCTATTTTAAAGAAGCTCAA
AAATTAAGACCGAACGATCCTCGAATGTTGATTGCACTTGGAGACACTTA
CAACACGATCGAGAACCTCAATGAAGCCAAAAAGtgttTTCTGCGAGCAG
TTCGACTCGGAGATTCAGAAGGCCAAGCTATCGTCAAACTAGGAAGACTG
CAAGAACAATGTAATGAGATGGAGGAAGCAGCTTTATCCTACACAAAATA
TATCAAACGCCTCGAAAACTCTGTTcACATCAGTGAAGACATAGCACACG
CGTGTTTGTTTCTAGCAAGGCATCATTTAGACTTGAAGCAATATGATGAA
GCGACCACTTATGCCAGGAAAGCCATGGAGTACACCGAGAGTCGTGACGA
AGGAAAAACATTGATGTTCGAAATCAGTCAGATGAGCTCAAGTGTGAAGT
GAtTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTCTTTTAT
TCTTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAACCAGATA
CCAAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCAATTCAC
AAATCGCAATCTGTCTCTACAATTTAAGAGACTTCGATAATTCAGTGGAA
TACTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACATATTGA
TGTGTATTCAAATATCTTATACATCCAGgAGGACAGACCAGAATTGAGTC
ATTTAGCACATCACGTTTGTAAAGTGGACAAATATAGAACTGAATCGTGT
GTTGTGATAGGAAATTATTACAGTTTGCGAGGTGATCATGACAAAGCAGT
GATGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTGCTGCAT
GGACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCTGCTGCT
ATTTTATCTTACAGAAAAGCCACTGgaGTGAACCCTCACGACTTTCGTGG
CTGGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTTTTTATT
CGCTCTGCTATTTTAAAGAAGCTCAAAAATTAAGACCGAACGATCCTCGA
ATGTTGATTGCACTTGGAGACACTTACAACACGATCGAGAACCTCAATGA
AGCCAAAAAGtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAGAAGGCC
AAGCTATCGTCAAACTAGGAAGACTGCAAGAACAATGTAATGAGATGGAG
GAAGCAGCTTTATCCTACACAAAATATATCAAACGCCTCGAAAACTCTGT
TcACATCAGTGAAGACATAGCACACGCGTGTTTGTTTCTAGCAAGGCATC
ATTTAGACTTGAAGCAATATGATGAAGCGACCACTTATGCCAGGAAAGCC
ATGGAGTACACCGAGAGTCGTGACGAAGGAAAAACATTGATGTTCGAAAT
CAGTCAGATGAGCTCAAGTGTGAAGTGAtTGAAAGAGCTGAAAGTACCGA
AACACTGGATGAGTGAATTCTTTTATTCTTCAGTGGAGTTGGAACTTCAC
ATGGCGGAAGAAGCGCTAACCAGATACCAAGACATCAGCGCTGCTGGTTT
TAACGGTAGTTCATACGTCAATTCACAAATCGCAATCTGTCTCTACAATT
TAAGAGACTTCGATAATTCAGTGGAATACTTTCGCGAGCTATACGACGCT
GATCCAGAAATGTTGGAACATATTGATGTGTATTCAAATATCTTATACAT
CCAGgAGGACAGACCAGAATTGAGTCATTTAGCACATCACGTTTGTAAAG
TGGACAAATATAGAACTGAATCGTGTGTTGTGATAGGAAATTATTACAGT
TTGCGAGGTGATCATGACAAAGCAGTGATGTATTTCAAACAAGCGCTGAG
GTTGAATTCGAATTACGTTGCTGCATGGACACTCCTTGGTCATGAATATG
TAGAACTTAAAAATACTTCTGCTGCTATTTTATCTTACAGAAAAGCCACT
GgaGTGAACCCTCACGACTTTCGTGGCTGGTATGGACTTGGACAAACTTA
CGAACTTTTGAATATGCCTTTTTATTCGCTCTGCTATTTTAAAGAAGCTC
AAAAATTAAGACCGAACGATCCTCGAATGTTGATTGCACTTGGAGACACT
TACAACACGATCGAGAACCTCAATGAAGCCAAAAAGtgttTTCTGCGAGC
AGTTCGACTCGGAGATTCAGAAGGCCAAGCTATCGTCAAACTAGGAAGAC
TGCAAGAACAATGTAATGAGATGGAGGAAGCAGCTTTATCCTACACAAAA
TATATCAAACGCCTCGAAAACTCTGTTcACATCAGTGAAGACATAGCACA
CGCGTGTTTGTTTCTAGCAAGGCATCATTTAGACTTGAAGCAATATGATG
AAGCGACCACTTATGCCAGGAAAGCCATGGAGTACACCGAGAGTCGTGAC
GAAGGAAAAACATTGATGTTCGAAATCAGTCAGATGAGCTCAAGTGTGAA
GTGAtTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTCTTTT
ATTCTTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAACCAGA
TACCAAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCAATTC
ACAAATCGCAATCTGTCTCTACAATTTAAGAGACTTCGATAATTCAGTGG
AATACTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACATATT
GATGTGTATTCAAATATCTTATACATCCAGgAGGACAGACCAGAATTGAG
TCATTTAGCACATCACGTTTGTAAAGTGGACAAATATAGAACTGAATCGT
GTGTTGTGATAGGAAATTATTACAGTTTGCGAGGTGATCATGACAAAGCA
GTGATGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTGCTGC
ATGGACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCTGCTG
CTATTTTATCTTACAGAAAAGCCACTGgaGTGAACCCTCACGACTTTCGT
GGCTGGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTTTTTA
TTCGCTCTGCTATTTTAAAGAAGCTCAAAAATTAAGACCGAACGATCCTC
GAATGTTGATTGCACTTGGAGACACTTACAACACGATCGAGAACCTCAAT
GAAGCCAAAAAGtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAGAAGG
CCAAGCTATCGTCAAACTAGGAAGACTGCAAGAACAATGTAATGAGATGG
AGGAAGCAGCTTTATCCTACACAAAATATATCAAACGCCTCGAAAACTCT
GTTcACATCAGTGAAGACATAGCACACGCGTGTTTGTTTCTAGCAAGGCA
TCATTTAGACTTGAAGCAATATGATGAAGCGACCACTTATGCCAGGAAAG
CCATGGAGTACACCGAGAGTCGTGACGAAGGAAAAACATTGATGTTCGAA
ATCAGTCAGATGAGCTCAAGTGTGAAGTGAtTGAAAGAGCTGAAAGTACC
GAAACACTGGATGAGTGAATTCTTTTATTCTTCAGTGGAGTTGGAACTTC
ACATGGCGGAAGAAGCGCTAACCAGATACCAAGACATCAGCGCTGCTGGT
TTTAACGGTAGTTCATACGTCAATTCACAAATCGCAATCTGTCTCTACAA
TTTAAGAGACTTCGATAATTCAGTGGAATACTTTCGCGAGCTATACGACG
CTGATCCAGAAATGTTGGAACATATTGATGTGTATTCAAATATCTTATAC
ATCCAGgAGGACAGACCAGAATTGAGTCATTTAGCACATCACGTTTGTAA
AGTGGACAAATATAGAACTGAATCGTGTGTTGTGATAGGAAATTATTACA
GTTTGCGAGGTGATCATGACAAAGCAGTGATGTATTTCAAACAAGCGCTG
AGGTTGAATTCGAATTACGTTGCTGCATGGACACTCCTTGGTCATGAATA
TGTAGAACTTAAAAATACTTCTGCTGCTATTTTATCTTACAGAAAAGCCA
CTGgaGTGAACCCTCACGACTTTCGTGGCTGGTATGGACTTGGACAAACT
TACGAACTTTTGAATATGCCTTTTTATTCGCTCTGCTATTTTAAAGAAGC
TCAAAAATTAAGACCGAACGATCCTCGAATGTTGATTGCACTTGGAGACA
CTTACAACACGATCGAGAACCTCAATGAAGCCAAAAAGtgttTTCTGCGA
GCAGTTCGACTCGGAGATTCAGAAGGCCAAGCTATCGTCAAACTAGGAAG
ACTGCAAGAACAATGTAATGAGATGGAGGAAGCAGCTTTATCCTACACAA
AATATATCAAACGCCTCGAAAACTCTGTTcACATCAGTGAAGACATAGCA
CACGCGTGTTTGTTTCTAGCAAGGCATCATTTAGACTTGAAGCAATATGA
TGAAGCGACCACTTATGCCAGGAAAGCCATGGAGTACACCGAGAGTCGTG
ACGAAGGAAAAACATTGATGTTCGAAATCAGTCAGATGAGCTCAAGTGTG
AAGTGAtTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTCTT
TTATTCTTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAACCA
GATACCAAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCAAT
TCACAAATCGCAATCTGTCTCTACAATTTAAGAGACTTCGATAATTCAGT
GGAATACTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACATA
TTGATGTGTATTCAAATATCTTATACATCCAGgAGGACAGACCAGAATTG
AGTCATTTAGCACATCACGTTTGTAAAGTGGACAAATATAGAACTGAATC
GTGTGTTGTGATAGGAAATTATTACAGTTTGCGAGGTGATCATGACAAAG
CAGTGATGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTGCT
GCATGGACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCTGC
TGCTATTTTATCTTACAGAAAAGCCACTGgaGTGAACCCTCACGACTTTC
GTGGCTGGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTTTT
TATTCGCTCTGCTATTTTAAAGAAGCTCAAAAATTAAGACCGAACGATCC
TCGAATGTTGATTGCACTTGGAGACACTTACAACACGATCGAGAACCTCA
ATGAAGCCAAAAAGtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAGAA
GGCCAAGCTATCGTCAAACTAGGAAGACTGCAAGAACAATGTAATGAGAT
GGAGGAAGCAGCTTTATCCTACACAAAATATATCAAACGCCTCGAAAACT
CTGTTcACATCAGTGAAGACATAGCACACGCGTGTTTGTTTCTAGCAAGG
CATCATTTAGACTTGAAGCAATATGATGAAGCGACCACTTATGCCAGGAA
AGCCATGGAGTACACCGAGAGTCGTGACGAAGGAAAAACATTGATGTTCG
AAATCAGTCAGATGAGCTCAAGTGTGAAGTGAtTGAAAGAGCTGAAAGTA
CCGAAACACTGGATGAGTGAATTCTTTTATTCTTCAGTGGAGTTGGAACT
TCACATGGCGGAAGAAGCGCTAACCAGATACCAAGACATCAGCGCTGCTG
GTTTTAACGGTAGTTCATACGTCAATTCACAAATCGCAATCTGTCTCTAC
AATTTAAGAGACTTCGATAATTCAGTGGAATACTTTCGCGAGCTATACGA
CGCTGATCCAGAAATGTTGGAACATATTGATGTGTATTCAAATATCTTAT
ACATCCAGgAGGACAGACCAGAATTGAGTCATTTAGCACATCACGTTTGT
AAAGTGGACAAATATAGAACTGAATCGTGTGTTGTGATAGGAAATTATTA
CAGTTTGCGAGGTGATCATGACAAAGCAGTGATGTATTTCAAACAAGCGC
TGAGGTTGAATTCGAATTACGTTGCTGCATGGACACTCCTTGGTCATGAA
TATGTAGAACTTAAAAATACTTCTGCTGCTATTTTATCTTACAGAAAAGC
CACTGgaGTGAACCCTCACGACTTTCGTGGCTGGTATGGACTTGGACAAA
CTTACGAACTTTTGAATATGCCTTTTTATTCGCTCTGCTATTTTAAAGAA
GCTCAAAAATTAAGACCGAACGATCCTCGAATGTTGATTGCACTTGGAGA
CACTTACAACACGATCGAGAACCTCAATGAAGCCAAAAAGtgttTTCTGC
GAGCAGTTCGACTCGGAGATTCAGAAGGCCAAGCTATCGTCAAACTAGGA
AGACTGCAAGAACAATGTAATGAGATGGAGGAAGCAGCTTTATCCTACAC
AAAATATATCAAACGCCTCGAAAACTCTGTTcACATCAGTGAAGACATAG
CACACGCGTGTTTGTTTCTAGCAAGGCATCATTTAGACTTGAAGCAATAT
GATGAAGCGACCACTTATGCCAGGAAAGCCATGGAGTACACCGAGAGTCG
TGACGAAGGAAAAACATTGATGTTCGAAATCAGTCAGATGAGCTCAAGTG
TGAAGTGAtTGAAAGAGCTGAAAGTACCGAAACACTGGATGAGTGAATTC
TTTTATTCTTCAGTGGAGTTGGAACTTCACATGGCGGAAGAAGCGCTAAC
CAGATACCAAGACATCAGCGCTGCTGGTTTTAACGGTAGTTCATACGTCA
ATTCACAAATCGCAATCTGTCTCTACAATTTAAGAGACTTCGATAATTCA
GTGGAATACTTTCGCGAGCTATACGACGCTGATCCAGAAATGTTGGAACA
TATTGATGTGTATTCAAATATCTTATACATCCAGgAGGACAGACCAGAAT
TGAGTCATTTAGCACATCACGTTTGTAAAGTGGACAAATATAGAACTGAA
TCGTGTGTTGTGATAGGAAATTATTACAGTTTGCGAGGTGATCATGACAA
AGCAGTGATGTATTTCAAACAAGCGCTGAGGTTGAATTCGAATTACGTTG
CTGCATGGACACTCCTTGGTCATGAATATGTAGAACTTAAAAATACTTCT
GCTGCTATTTTATCTTACAGAAAAGCCACTGgaGTGAACCCTCACGACTT
TCGTGGCTGGTATGGACTTGGACAAACTTACGAACTTTTGAATATGCCTT
TTTATTCGCTCTGCTATTTTAAAGAAGCTCAAAAATTAAGACCGAACGAT
CCTCGAATGTTGATTGCACTTGGAGACACTTACAACACGATCGAGAACCT
CAATGAAGCCAAAAAGtgttTTCTGCGAGCAGTTCGACTCGGAGATTCAG
AAGGCCAAGCTATCGTCAAACTAGGAAGACTGCAAGAACAATGTAATGAG
ATGGAGGAAGCAGCTTTATCCTACACAAAATATATCAAACGCCTCGAAAA
CTCTGTTcACATCAGTGAAGACATAGCACACGCGTGTTTGTTTCTAGCAA
GGCATCATTTAGACTTGAAGCAATATGATGAAGCGACCACTTATGCCAGG
AAAGCCATGGAGTACACCGAGAGTCGTGACGAAGGAAAAACATTGATGTT
CGAAATCAGTCAGATGAGCTCAAGTGTGAAGTGAtTGAAAGAGCTGAAAG
TACCGAAACACTGGATGAGTGAATTCTTTTATTCTTCAGTGGAGTTGGAA
CTTCACATGGCGGAAGAAGCGCTAACCAGATACCAAGACATCAGCGCTGC
TGGTTTTAACGGTAGTTCATACGTCAATTCACAAATCGCAATCTGTCTCT
ACAATTTAAGAGACTTCGATAATTCAGTGGAATACTTTCGCGAGCTATAC
GACGCTGATCCAGAAATGTTGGAACATATTGATGTGTATTCAAATATCTT
ATACATCCAGgAGGACAGACCAGAATTGAGTCATTTAGCACATCACGTTT
GTAAAGTGGACAAATATAGAACTGAATCGTGTGTTGTGATAGGAAATTAT
TACAGTTTGCGAGGTGATCATGACAAAGCAGTGATGTATTTCAAACAAGC
GCTGAGGTTGAATTCGAATTACGTTGCTGCATGGACACTCCTTGGTCATG
AATATGTAGAACTTAAAAATACTTCTGCTGCTATTTTATCTTACAGAAAA
GCCACTGgaGTGAACCCTCACGACTTTCGTGGCTGGTATGGACTTGGACA
AACTTACGAACTTTTGAATATGCCTTTTTATTCGCTCTGCTATTTTAAAG
AAGCTCAAAAATTAAGACCGAACGATCCTCGAATGTTGATTGCACTTGGA
GACACTTACAACACGATCGAGAACCTCAATGAAGCCAAAAAGtgttTTCT
GCGAGCAGTTCGACTCGGAGATTCAGAAGGCCAAGCTATCGTCAAACTAG
GAAGACTGCAAGAACAATGTAATGAGATGGAGGAAGCAGCTTTATCCTAC
ACAAAATATATCAAACGCCTCGAAAACTCTGTTcACATCAGTGAAGACAT
AGCACACGCGTGTTTGTTTCTAGCAAGGCATCATTTAGACTTGAAGCAAT
ATGATGAAGCGACCACTTATGCCAGGAAAGCCATGGAGTACACCGAGAGT
CGTGACGAAGGAAAAACATTGATGTTCGAAATCAGTCAGATGAGCTCAAG
TGTGAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010296XLOC_010296Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018331-proteinTCONS_00018331-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018331-exon-sc0000297-1491911889:198..376TCONS_00018331-exon-sc0000297-1491911889:198..376Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:198..376TCONS_00018331-exon-sc0000297-1510915933:198..376Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:198..376TCONS_00018331-exon-sc0000297-1575043694:198..376Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:2229..2326TCONS_00018331-exon-sc0000297-1491911889:2229..2326Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:2229..2326TCONS_00018331-exon-sc0000297-1510915933:2229..2326Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:2229..2326TCONS_00018331-exon-sc0000297-1575043694:2229..2326Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:2643..2724TCONS_00018331-exon-sc0000297-1491911889:2643..2724Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:2643..2724TCONS_00018331-exon-sc0000297-1510915933:2643..2724Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:2643..2724TCONS_00018331-exon-sc0000297-1575043694:2643..2724Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:3006..3170TCONS_00018331-exon-sc0000297-1491911889:3006..3170Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:3006..3170TCONS_00018331-exon-sc0000297-1510915933:3006..3170Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:3006..3170TCONS_00018331-exon-sc0000297-1575043694:3006..3170Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:3779..3887TCONS_00018331-exon-sc0000297-1491911889:3779..3887Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:3779..3887TCONS_00018331-exon-sc0000297-1510915933:3779..3887Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:3779..3887TCONS_00018331-exon-sc0000297-1575043694:3779..3887Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:4105..4180TCONS_00018331-exon-sc0000297-1491911889:4105..4180Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:4105..4180TCONS_00018331-exon-sc0000297-1510915933:4105..4180Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:4105..4180TCONS_00018331-exon-sc0000297-1575043694:4105..4180Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:4412..4473TCONS_00018331-exon-sc0000297-1491911889:4412..4473Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:4412..4473TCONS_00018331-exon-sc0000297-1510915933:4412..4473Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:4412..4473TCONS_00018331-exon-sc0000297-1575043694:4412..4473Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:4602..4680TCONS_00018331-exon-sc0000297-1491911889:4602..4680Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:4602..4680TCONS_00018331-exon-sc0000297-1510915933:4602..4680Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:4602..4680TCONS_00018331-exon-sc0000297-1575043694:4602..4680Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:5469..5582TCONS_00018331-exon-sc0000297-1491911889:5469..5582Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:5469..5582TCONS_00018331-exon-sc0000297-1510915933:5469..5582Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:5469..5582TCONS_00018331-exon-sc0000297-1575043694:5469..5582Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:7192..8014TCONS_00018331-exon-sc0000297-1491911889:7192..8014Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:7192..8014TCONS_00018331-exon-sc0000297-1510915933:7192..8014Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:7192..8014TCONS_00018331-exon-sc0000297-1575043694:7192..8014Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1491911889:8150..9389TCONS_00018331-exon-sc0000297-1491911889:8150..9389Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1510915933:8150..9389TCONS_00018331-exon-sc0000297-1510915933:8150..9389Clytia hemisphaericaexon
TCONS_00018331-exon-sc0000297-1575043694:8150..9389TCONS_00018331-exon-sc0000297-1575043694:8150..9389Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:198..9389 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.68948	7.3204	2.19674	2.56303	4.57636	2.37242	4.76306	6.01489	13.9983	7.80888	9.07623	10.6762	36.3658	39.6433	6.09803	5.89043	12.537	14.8474	39.316	42.6356	24.946	23.7176	20.9919	23.0839	16.8567	18.1157	5.99275	5.05188	5.99223	6.80287
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00018331 vs. Swiss-Prot (Human)
Match: CDC23 (Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3)

HSP 1 Score: 359.377 bits (921), Expect = 6.805e-111
Identity = 170/338 (50.30%), Postives = 239/338 (70.71%), Query Frame = 2 
Query:    2 LKELKVPKHWMSEFFYSSVELELHMAEEALTRYQDISAAGFNGSSYVNSQIAICLYNLRDFDNSVEYFRELYDADPEMLEHIDVYSNILYIQEDRPELSHLAHHVCKVDKYRTESCVVIGNYYSLRGDHDKAVMYFKQALRLNSNYVAAWTLLGHEYVELKNTSAAILSYRKATGVNPHDFRGWYGLGQTYELLNMPFYSLCYFKEAQKLRPNDPRMLIALGDTYNTIENLNEAKKCFLRAVRLGDSEGQAIVKLGRLQEQCNEMEEAALSYTKYIKRLENSVHISEDIAHACLF--LARHHLDLKQYDEATTYARKAMEYTESRDEGKTLMFEISQM 1009
            LK L +P  WM EFF + +  EL + EEAL +YQ++   GF+ SSY+ SQIA+  +N+RD D ++  F EL   DP  +E++D +SN+LY++  + ELS+LAH++C++DKYR E+C VIGNYYSLR  H+KA +YF++AL+LN  Y+ AWTL+GHEY+E+KNTSAAI +YR A  VN  D+R WYGLGQTYE+L MPFY L Y++ A +LRPND RML+ALG+ Y  +  L EAKKC+ RA  +GD E  A+VKL +L EQ  E E+AA  Y KYI+ + +   I E +  +  F  LA+++   K +DEA+T A+K   + ++R+EGK L+ +I Q+
Sbjct:  219 LKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLTESEQAAQCYIKYIQDIYSCGEIVEHLEESTAFRYLAQYYFKCKLWDEASTCAQKCCAFNDTREEGKALLRQILQL 556
The following BLAST results are available for this feature:
BLAST of TCONS_00018331 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC236.805e-11150.30Cell division cycle protein 23 homolog OS=Homo sap... [more]
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