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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018203 ID=TCONS_00018203|Name=TCONS_00018203|organism=Clytia hemisphaerica|type=transcript|length=860bp
AGTTAATCAGATGTGATGGAGTGCTTTTTATGCTAAATCTCAAGCTATTC
CAGTGTTGAAATACACTCCGCCACTCTGCTTGTATTAGCATCGAAATAGA
CTCCAAAAGGTCCCGTCTTGATTGACCTTTTGTAAGTAGTCTCTATCAGG
TAATACGCAATGATGACTGGATCCTGATTCATGATGTATTTTGAATACGA
GAGATCCTGAGAGATCATCCATGTATAAAAGTGACAATCAACAACTTTGG
AAAGACAGAACACGTTTCATAATAAACAAGTAAACACGATCAATCCAACA
TTGTTTGTTGTGTGTGGCCATCACAGGACACTTGCAGATTTTGACCAAGA
AAAGTAAAGAACAAGCTATAAAAATGGCTGGCTTTAATAAGAAACAAGAA
ATGCGATTGAACGTCACCGCATTGAAGATTCAACGAATCGCAGATGACTT
TAGTTTGCGTTTGACACCAACGAAGAAAAATACCAACGGAACTGGACGGA
ACTTTGCTAGTGGAATCATTTCCTCTCCAACGAAAAACTCTTCCGCTTTG
AGTTCATATGGTGGAAAAGGCAAATCTTCATGTTTGGCAAGTCCCAAGAA
AAAATAACTTAGCATTTTTGTATATTTCGTCAACGTtggctttttttttc
ttccatctGCCGAGTGTGCTCGATGATATCAGAGCttgttcaaattaaaa
gaaagagactttATGAAACTTATGATATTTTGTATATTCAATAATGGGCT
TCCGGCAATACAATATTTATTGTTTTGAAGGTCAATACGGGAAAACATTG
ACCGCAGCCAGAGTACACACCGAGCTTTATTTCCAAAATCAGGAGGCGAG
TGAGCTGAGC Run BLAST on NCBI transcript from alignment at sc0000291:2..2934- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018203 ID=TCONS_00018203|Name=TCONS_00018203|organism=Clytia hemisphaerica|type=transcript|length=2933bp|location=Sequence derived from alignment at sc0000291:2..2934- (Clytia hemisphaerica)
AGTTAATCAGATGTGATGGAGTGCTTTTTATGCTAAATCTCAAGCTATTC
CAGTGTTGAAATACACTCCGCCACTCTGCTTGTATTAGCATCGAAATAGA
CTCCAAAAGGTCCCGTCTTGATTGACCTTTTGTAAGTAGTCTCTATCAGG
TAATACGCAATGATGACTGGATCCTGATTCATGATGTATTTTGAATACGA
GAGATCCTGAGAGATCATCCATGTATAAAAGTGACAATCAACAACTTTGG
AAAGACAGAACACGTTTCATAATAAACAAGTAAACACGATCAATCCAACA
TTGTTTGTTGTGTGTGGCCATCACAGGACACTTGCAGGTATTTTCTATTC
ATACTATTTCACTACTATCATAAACATTGATAAATGATTCTTTGAATTAC
CTCTAACTTTACATGCCCTTTTCTTGTCTACGAGACTGGAAACGTGGCTG
TCTTCTATCTTTATAGCTCCTAGTTTAGTAGTTTGGCGTTAGTCTGAGGT
CCATTGACTTCCAATCCCGAAGGGCTAGACTCAAAAGTCCAGGATGGGAA
ATGAAGTCACTTATTTCCCATCCAGGACGCCCGCGCGTATTTTTTTATAA
GTCTATCGCTAGATTAAAAAAAAACGCAGTCCTCCTCAAAAACAAAGGAA
CCGATAGATACAATCCGTCGTCATGATTTAGTTCTGGATGGGAAATAAAT
GTCTTCACTTTTCTTGCCTGTGAAAGGTTAGAGATTCTACTCTAGCTCTT
CGGGCTTTGAACCCATAATGCTGAGATCGTTGTGGTCATAGGCTAAAAAA
TGGATTATGTTTGTGTTCATTCGATATGCACACTGTAGCCTGCTGCCTAA
TTATAATGTTATGTTAGCATGAATTATTGCACTCACCTTTCGATCGAGTA
ATTTAATTCTCTTCTAGCTTAGATAGGCGCTCTACCTTGACACTATCCAA
CTATTTGATCAATTCAAGGGTTGGGCGTTGCCATTGAGTATGATATTTCT
TGAAGTACTCAAAATAACGAAGCGTCATTTTCTAAAATAGATGAAAAAGG
TCAAGATCTCACTATTGTAGGGGAGGGGCAAATAAAAATGGGAATGGATT
CCTGTCAAAAAGAGACAACCATATGACAAGCCATCTTATGCTGGCTTGGC
TTAAAATCTCGAGAATGACTTGAAATTGATTCATTCAAGTCTTCGGTGTG
CATAAGAACAGGCATTGGCTTAAAAATAAATGTTTATGAAAGTTTTTCTT
GTTACGGAGTCTTCAGATTGACGGAAGAAGGAACTGATACAAAAACTAAA
ATTTCCTAGACAACTTAAACATGGCATGTACTAAAAGACGGATCGACGGA
TCGACGGATCAACGGATCGACGGATTACTAAAAGACGGATCGTCGCATTT
CGGATTACTAAAAGACGGATCGTCGTATTTCGGATTACTAAAACATGGAT
CGTCGTATTTCGGATTACTAAAACATGGATCGTCGTATTTCGGATTACTA
AAACACGAATCGTCGTATTTTTTTAAATAGAAAGCTATAGTCTGAAACCA
TAGTATAAGAAAGCCGCGGCTGGAATATGTACCGCATTGTCTTTTCAGTT
AATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGTAATCTGAAATACGACGATCCGTCTTTTAGTAATCTGAA
ATACGACGATCCGTCTTTTAGTAATCCGAAATACGACGATCCGTCTTTTA
GTAATCCCTCGATCCGTTGATCCGTCGATCCGTCGATCCGTCTTTTAGTA
TATGCCCTTAAACATTAAAATATTCTTAATTGCATTCTTCTTCTTGTTCA
AAGGGATCAATTTGGAACCTTCCTTATATTTAACTTTTGTTTTGTTTCTA
TACTTTTCAGATTTTGACCAAGAAAAGTAAAGAACAAGCTATAAAAATGG
CTGGCTTTAATAAGAAACAAGAAATGCGATTGAACGTCACCGCATTGAAG
ATTCAACGAATCGCAGATGACTTTAGTTTGCGTTTGACACCAACGAAGAA
AAATACCAACGGAACTGGACGGAACTTTGCTAGTGGAATCATTTCCTCTC
CAACGAAAAACTCTTCCGCTTTGAGTTCATATGGTGGAAAAGGCAAATCT
TCATGTTTGGCAAGTCCCAAGAAAAAATAACTTAGCATTTTTGTATATTT
CGTCAACGTTGGCTTTTTTTTTCTTCCATCTGCCGAGTGTGCTCGATGAT
ATCAGAGCTTGTTCAAATTAAAAGAAAGAGACTTTATGAAACTTATGATA
TTTTGTATATTCAATAATGGGCTTCCGGCAATACAATATTTATTGTTTTG
AAGGTCAATACGGGAAAACATTGACCGCAGCCAGAGTACACACCGAGCTT
TATTTCCAAAATCAGGAGGCGAGTGAGCTGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018203-exon-sc0000291-1575043694:2598..2934 | TCONS_00018203-exon-sc0000291-1575043694:2598..2934 | Clytia hemisphaerica | exon |
| TCONS_00018203-exon-sc0000291-1575043694:2..524 | TCONS_00018203-exon-sc0000291-1575043694:2..524 | Clytia hemisphaerica | exon |
| TCONS_00018203-exon-sc0000291-1510915933:2598..2934 | TCONS_00018203-exon-sc0000291-1510915933:2598..2934 | Clytia hemisphaerica | exon |
| TCONS_00018203-exon-sc0000291-1510915933:2..524 | TCONS_00018203-exon-sc0000291-1510915933:2..524 | Clytia hemisphaerica | exon |
| TCONS_00018203-exon-sc0000291-1491911889:2598..2934 | TCONS_00018203-exon-sc0000291-1491911889:2598..2934 | Clytia hemisphaerica | exon |
| TCONS_00018203-exon-sc0000291-1491911889:2..524 | TCONS_00018203-exon-sc0000291-1491911889:2..524 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000291 | supercontig | sc0000291:2..2934 - |
Blast
The following BLAST results are available for this feature:
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