TCONS_00018041 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018041
Unique NameTCONS_00018041
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2825

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018041 ID=TCONS_00018041|Name=TCONS_00018041|organism=Clytia hemisphaerica|type=transcript|length=2825bp
aaaGTTTTGATTACTCAAAATTCTGATTACACTAccatgtaaattttttt
atggacAATTTATTTATCTTTGCCTTTTATGTAAGTGAAATCGGTTGAAG
AGTTTAAAATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgt
ttaatatttgtttttcaCTCTGTATGGAGTTTACGTGAAATTTTACAAAG
AATTTACGTCGATGATGCAGTTAGTGTTAAAGAGAGTAAATACTGGTTGT
TAACATTGATTTTAGCACTGATCGTTTTAGAAGGTGCTTATACGGTGATT
ATAAGGAAGGGCCACGAATATAAGTATTTTTGGCCCAGTGGATTTATTTA
CATTCTCATTATGATACCAAACACTTGTATTCTCGAATCATTTCTTATGG
ATGAAGAAATCAAATGCACTGCATTATGGGAACAACAAAATCTGAATCCA
AAACTTCAGTATGACGGAGAACAAACAAGACTTTGTCTTGCAGCCAAATC
AAAGATGAAGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGT
TAGGGGCTCTAGTAATGGGTCGTTGGTTGTTGCCGAGAGGTGAATTGACA
CGTGATCAGTTATCCGCTTTGCTATTGGCTTTCATTGGGAATGGAGCTGA
TTGTATTGAATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATC
GTCAAGTAACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAA
TTTGCTGTTGTTACCACCAAAACTACGGATGAATACAAAGAAGAAATTAC
TGAAGATGACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACA
CTAATGGAAATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTACCACGC
TACATTCGAAAATTgatgaaacaaaaaagtaaaacacgTGCTTCATATCA
CGCTACACTTTCTTCAGTCACCCTAGCATTGAAAGATGAACGATCTAATA
CACTATCTATGCCGACATCACCTCAGCGATGTTCGTCATATGAGTTTCGT
ACGCGCGCGTTCACGCTGGAAAGCAAACTGATGGATGATAACGTCTTTGA
GGATGATCATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTCGACGTA
AACAAGGTACTTTTTTATCAGACGCAGTGAAATCAGATGAtcaaaaaaga
agtaaaaagaTCCGTTTCCGTGCAGACACCAATTTGAGTACCAATGAAAG
AGAAAGCAAAGAAACTGCTCGTTACTTGCAAACACTTGCACATTATGGTC
GATGGGATGAATTCTCAAAGGTCTTGAAGCAAGCTAAGAGTTCCGGATTC
AATCGTAATTCAGTCCGATTTTCCTCTACAACGGAACAGTTGGATGATGA
CGTCAATAACAACGAAACGGAACAAACCAAACAAAATCGTCTTGCAGATT
TTTTACAACGAATCCCAAAGTTAAAATCAATGAATTTGGTGGaccaagat
ttttttcaaacctttttcttACTGACAACACTGGAGCTGCCCTATTTCAT
TGCCAGAGTTGTGTTTACTGTTAAATATAACGTGTCAAGTACCACAATGG
TGTTTTATACTACAAAAAATGTGGTCatgattatttttttgctttacaGA
CTTTGGGtgaaattttccgctgatttagATTCTGCGGACCGAGAGGAGAC
AGATGAGAATGGTGATTATTCAAGAGACTTGATGAATgtaaaatgattga
aaaaacgttaaaaccTGATGGCGGAGCAAGctgtagaaaattttcgaaat
gggacgaaaataaaaaaatgtagtgtttccagaatgcgggtgaaggaaaa
aagctctcatgcggccggccggaaaattttgttgttgctatttttgataa
cttaagatcattgagaTAGAACTTTAAATGATAACTTCTATGTagaaaca
gtatgaagcaagccctgaatactaatatTTCAACTTCTAAcgaagtctgc
ggccgggtattagaaaataatatttttttcctgaaacactacattttctt
attttcaccttagctgaaattttgcacacttgctcCTAGGTCAAATTCtg
aagatatttttcaaaagtattttggTTTTAGACCTTCGGGTTTTACAATA
CAACTTCAATTTGGCCTTGTGAACAAGTTTGACTGTTACTTATTGTATTG
TATAAATGATTAGAAAAGAAAATTCCAGGTCTTTGGTAAGCCgaagtata
attttttattatctaCACTGGATAGTATTTTGTGCAAAGTTTTGGATGGA
ATTTTATTTATACTAATTTCGCAAAGCGAAGTCCTTCAGAAAAATAATCC
GCAATATTTCACTTTCGTtataacaaaaacaacaacaacaacaacaattt
ttttgtttgtttttaaaaataatattttttagataatttaaaTTATTACA
TTTCTTACAGGAATATGGTATAActctttcatatttttttaaatttattt
acaaCATTAAACTTaaggaaaaacaacaaaatttagtCTTAGataaaatt
gttaaaacaaataattcgacgaaaaaaaacctaaaaatcttcaaaaaatc
gatgttataaaataaagatgacaATTTGCTAAAATGTAATATTATCTTAT
TGTAACGTAAATTTATATAAGTCTAAAAGGACATATCAAGTATCTGTGAC
GTACGaacttgtaatttttttcacaaCAATTTATGTAAAATGTAAGAACT
TGATCCAAACGCCAAAAGAAACTTGCTCTTAGAACTCCCTTAGAGATACC
AACGTGACATAATAAATCAAACATT
Run BLAST on NCBI

protein sequence of TCONS_00018041-protein

>TCONS_00018041-protein ID=TCONS_00018041-protein|Name=TCONS_00018041-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MSLCWRFSAAILSRLIFVFHSVWSLREILQRIYVDDAVSVKESKYWLLTL
ILALIVLEGAYTVIIRKGHEYKYFWPSGFIYILIMIPNTCILESFLMDEE
IKCTALWEQQNLNPKLQYDGEQTRLCLAAKSKMKDDQKLRAAIEIGMLGA
LVMGRWLLPRGELTRDQLSALLLAFIGNGADCIEFLNTWNDFPDLRNRQV
TDTVLVLYSVSILQFAVVTTKTTDEYKEEITEDDQNLFGEETRTRTDTNG
NLKPVRTSASGVPRYIRKLMKQKSKTRASYHATLSSVTLALKDERSNTLS
MPTSPQRCSSYEFRTRAFTLESKLMDDNVFEDDHSITRSQIPQIPRRKQG
TFLSDAVKSDDQKRSKKIRFRADTNLSTNERESKETARYLQTLAHYGRWD
EFSKVLKQAKSSGFNRNSVRFSSTTEQLDDDVNNNETEQTKQNRLADFLQ
RIPKLKSMNLVDQDFFQTFFLLTTLELPYFIARVVFTVKYNVSSTTMVFY
TTKNVVMIIFLLYRLWVKFSADLDSADREETDENGDYSRDLMNVK
Run BLAST on NCBI

transcript from alignment at sc0000284:59346..65560+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018041 ID=TCONS_00018041|Name=TCONS_00018041|organism=Clytia hemisphaerica|type=transcript|length=6215bp|location=Sequence derived from alignment at sc0000284:59346..65560+ (Clytia hemisphaerica)
aaaGTTTTGATTACTCAAAATTCTGATTACACTAccatgtaaattttttt
atggacAATTTATTTATCTTTGCCTTTTATGTAAGTGAAATCGGTTGAAG
AGTTTAAAATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgt
ttaatatttgtttttcaCTCTGTATGGAGTTTACGTGAAATTTTACAAAG
AATTTACGTCGATGATGCAGTTAGTGTTAAAGAGAGTAAATACTGGTTGT
TAACATTGATTTTAGCACTGATCGTTTTAGAAGGTGCTTATACGGTGATT
ATAAGGAAGGGCCACGAATATAAGTAGTAAGTATGTATTAAGTATTTTAA
AGTTCATCAGCTCATATCAGTCTAGTTATAGATGTTTTTCAtaatcaaca
aaatttttccATAGGAAATTGCCTTTTTATGGATAGATGAATAAACTTAC
AGACTGAAATCTCGAAATCTCTCTTGAAATCTTTTTAGCCTAGCCgcata
cacttttttattttaaaagaacaacgaggctcaaaatcggcaaaaaaata
agaacaatttaagaacaatactGAGCTTGAAATTActtaatttcaagcaa
tttaggggtcaaagtataCGAACAGCCGAATCTCAgctaaattttactgg
ttcttataaaaaaaagtttaacgggTGAATGACTAGAGGCATCGATTACA
TTGAGTAGTCTGTGATTANtcaagcaatttaggggtcaaagtagcaAAAA
TTGGGTATACATTGAGTAGTCTGTAATTTAAAATTTACTTTATACTTTCA
GTTTTTGGCCCAGTGGATTTATTTACATTCTCATTATGATACCAAACACT
TGTATTCTCGAATCATTTCTTATGGATGAAGAAATCAAATGCACTGCATT
ATGGGAACAACAAAATCTGAATCCAAAACTTCAGGTAATTTTAAATctct
ccaaaatttcaaaagaaagaatTACTATGTATTATGTTTGTtcgattttt
gttttgttattctGGATTTTCTCTTTGACACTGGTTGAACCACAGATACC
TTATAAAACACTAATAAAGCTTTTCTTAgccccgggggtactaggtttac
gaggtgacgggtatgtccgagctaaagattgaaaatcgacccttaaaCAA
GAGAGGATGAATGGCGTTTTGGGGACCTTTAGAATGCTTTTTCCTAAAAT
GAGAGAGAAAAACTGACATTATggggacccttagagagacttttctcaaa
atctttgaaaatcacgacccttgagagaggaaatttcgattttcgtgaat
CTTGGACCCTTACAAAGACTTTTGAATGGTTTTTttgagactttcgaggg
tgcgaaaaatggctcgcacatacccagcacccattttgcctaagtatagA
TATATGTGTAGTTGATCGCTCGAATTTCTATATGCTTGGTAGGTACAAGT
CGTCAGGTTGAGCgtaattatagagtgtagtcaTTGGTGAAGTTATTTAT
GCTTAGAACATTTTCAATACAGTGTGTGTCTGTCGAAAAATTCCGCAATG
ACAAATAAACTGGACATGGACACGGAAAGGGTTAGTGTATCAGGTTTTAC
TGTATATAAAATCTGTTCCTATTCTCCGAGAAAAAGCGATGAACTTCACA
CCACGATTGAGCTTTCTCTTCCTTTACAGTATGACGGAGAACAAACAAGA
CTTTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCAGAAACTACGTGC
AGCTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGGGTCGTTGGTTGT
TGCCGAGAGGTGAATTGACACGTGATCAGTTATCCGCTTTGCTATTGGCT
TTCATTGGGAATGGAGCTGATTGTATTGGTAGGTTTTAGTATGTTCTGAA
CTTAATGCACAGCACAGGATTTACACAGCCTTATTCCATCAAACTTAAAT
CCCGCCAAATTCAATTTACACCATGCATTCTCTAAATACGTTTTATTTCG
GACGTTTTTAGCTCGTTTAATAACGATTGTTGGCCAGAAATTTCCTACAA
CCACCAAATTCTAGCCATTTGCCAAAATACATTCCCTCTAAGAAACTTTT
TCGACCATTCGCCAAATTGGATTCTAGCCAAAAACTTTCCTTGAAGGTAA
TTCATACATATTTCACTCTCAGTCAAAATTCTTCACTGTTCCGATagcta
ttttagaaaaatgtttaACATTTCGGGGGTAACTTTCCATTGCTTCTTTA
GTCACTCTTCCAAAAGTCGAACCATGTACGAAACAAGTCCTTTAGCATat
aataatctttttgttttctagAATTTCTAAATACCTGGAATGATTTTCCT
GATTTACGAAATCGTCAAGTAACAGACACGGTCCTTGTTTTGTATTCGGT
CAGTATTTTACAATTTGCTGTTGTTACCACCAAAACTACGGATGAATACA
AAGAAGAAATTACTGAAGATGACCAAAATTTGTTCGGCGAAGAAACCAGG
ACCAGAACAGACACTAATGGAAATCTAAAGGTATTAATATAATgacgata
ttttttataaataaccCAGATTTTGGACTCAGGGCTAGAGTTGCTTAGCC
TTATCTCAATTTCTGAAGAGCCTCTAAGATTATACCATATAGTGTGCTTA
CTGGGCAAGGGATATCGgacaaaaagctttttttgttaCGATGAAGTACA
AAAGTTATCCTTCCAATTTTAGGGCCCGAGCCTTAAAGAACTGGTTACTT
ATAGAGAATGTGTAAATTGTTGATTAAAAGTATAACTGCTCTACTCTGTT
TCATAATTTATTGCATCTTACATTCTGCCTTAAATTTCAAGATATACGAA
AGCTTGAATTAGTAAAggccaaaaatgaaaaaaagagagattgaaaaaaa
ggaagatccaATTAAGAACTTTTTTGCCGCAAAATTTGCGTTAAAAGTTA
GTCTTGATTAAAATTCCTTTTCCTAGTTCGCCAAACCCCCCCTGTCGGTA
ATTTCCGTAATTTTCGTTAGGACTTGCGTATGGTTTCCAAAGAACAacat
ttggggggggggctctgtAACCAGATGGGTAGACCTTGGGTGAAAATTTA
ATACTTTTTATATGTAAGTTAACAAACCTTTTGTGTCTTTCAGCCTGTTC
GAACGAGTGCAAGTGGAGTACCACGCTACATTCGAAAATTgatgaaacaa
aaaagtaaaacacgTGCTTCATATCACGCTACACTTTCTTCAGTCACCCT
AGCATTGAAAGATGAACGATCTAATACACTATCTATGCCGACATCACCTC
AGCGATGTTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGAAAGC
AAACTGATGGATGATAACGTCTTTGAGGATGATCATTCTATTACAAGAAG
TCAAATTCCTCAAATTCCTCGACGTAAACAAGGTATAGGCAAGGAATTTT
AATTTatgatatttatgacgtaatgttttctacggaaagaccctgGTTTT
TGCGAGTAGTggaaaattttatacaacttttgtctagtttaaatttgcca
ctactagctaagaccggggtatttccgtagaaaaNcaacttttgtctagt
ttaattTTGCCACTACTAGCTAAGACCGGGGTATTTCCATAGAaagcatt
acgtcatgaataaaacccttttatttaattttcttgGTATAACATAACCG
CGATATATTTCGTGGATTGCAAAGAATATCTTGAATGAATATCCTTTTTC
TTTGAACattaaataagttttttttcatttccaaactcgaacccagtcct
ttAGTTCACTTTTTATCCTGATAATGCTCACGATTATtgtcaacctcgtc
cccgtgtattccaggctttatttatgttactgatagacgccagagaatac
cgagtttatgtatgtgtgtttttcagcgacggagacggtaaggttctaat
ttgagtagatcctgaccagctgagaacgacggtaaatcagcacttttacc
gtcctcgattttgcggggcggaattgcgggtttttccaaatcgcttcagt
cactctaccgtcctcaaaagtgcaaacacataaactcggtattaccctgg
tgttggctgatgtgAGTGAGAGGAGTAGAGTGAGAATggaaacttctcaa
aacaatacgtcataaataattctgacgttacaaagttgcACTGCAATGCA
ACggctttaaaaaagaagaacgaatgaaatctgacgttttgtttttggat
tacgtaatcttacacgttcgaaaaccagccaatgccagggtattatctag
cgctatctgtaagcaataaataaaaaaactgatAATACACAGAGAACGAG
GCTGGATTATTGTATCAAGCCAGTCAGTAAATGACTTTAGGTATGGGATT
GATTCACTCCCAGGAGGATTTCTGCTGCCCCACATACTTTATAAATTTTA
GGCCTCTGCTCATCCTCTTAAGGACAAGTTTCTTATAGAATATAAAAGTA
GCTCTGCCAACTAGACTAAAGTATTTCGGTTTTTCTCTCTTCCAAGGTAC
TTTTTTATCAGACGCAGTGAAATCAGATGAtcaaaaaagaagtaaaaaga
TCCGTTTCCGTGCAGACACCAATTTGAGTACCAATGAAAGAGAAAGCAAA
GAAACTGCTCGTTACTTGCAAACACTTGCACATTATGGTCGATGGGATGA
ATTCTCAAAGGTCTTGAAGCAAGCTAAGAGTTCCGGATTCAATCGTAATT
CAGTCCGATTTTCCTCTACAACGGAACAGTTGGATGATGACGTCAATAAC
AACGAAACGGAACAAACCAAACAAAATCGTCTTGCAGATTTTTTACAACG
AATCCCAAAGTTAAAATCAATGAATTTGGTGGaccaagatttttttcaaa
cctttttcttACTGACAACACTGGAGCTGCCCTATTTCATTGCCAGAGTT
GTGTTTACTGTTAAATATAACGTGTCAAGTACCACAATGGTGTTTTATAC
TACAAAAAATGTGGTCatgattatttttttgctttacaGACTTTGGGtga
aattttccgctgatttagATTCTGCGGACCGAGAGGAGACAGATGAGAAT
GGTGATTATTCAAGAGACTTGATGAATgtaaaatgattgaaaaaacgtta
aaaccTGATGGCGGAGCAAGctgtagaaaattttcgaaatgggacgaaaa
taaaaaaatgtagtgtttccagaatgcgggtgaaggaaaaaagctctcat
gcggccggccggaaaattttgttgttgctatttttgataacttaagatca
ttgagaTAGAACTTTAAATGATAACTTCTATGTagaaacagtatgaagca
agccctgaatactaatatTTCAACTTCTAAcgaagtctgcggccgggtat
tagaaaataatatttttttcctgaaacactacattttcttattttcacct
tagctgaaattttgcacacttgctcCTAGGTCAAATTCtgaagatatttt
tcaaaagtattttggTTTTAGACCTTCGGGTTTTACAATACAACTTCAAT
TTGGCCTTGTGAACAAGTTTGACTGTTACTTATTGTATTGTATAAATGAT
TAGAAAAGAAAATTCCAGGTCTTTGGTAAGCCgaagtataattttttatt
atctaCACTGGATAGTATTTTGTGCAAAGTTTTGGATGGAATTTTATTTA
TACTAATTTCGCAAAGCGAAGTCCTTCAGAAAAATAATCCGCAATATTTC
ACTTTCGTtataacaaaaacaacaacaacaacaacaatttttttgtttgt
ttttaaaaataatattttttagataatttaaaTTATTACATTTCTTACAG
GAATATGGTATAActctttcatatttttttaaatttatttacaaCATTAA
ACTTaaggaaaaacaacaaaatttagtCTTAGataaaattgttaaaacaa
ataattcgacgaaaaaaaacctaaaaatcttcaaaaaatcgatgttataa
aataaagatgacaATTTGCTAAAATGTAATATTATCTTATTGTAACGTAA
ATTTATATAAGTCTAAAAGGACATATCAAGTATCTGTGACGTACGaactt
gtaatttttttcacaaCAATTTATGTAAAATGTAAGAACTTGATCCAAAC
GCCAAAAGAAACTTGCTCTTAGAACTCCCTTAGAGATACCAACGTGACAT
AATAAATCAAACATT

Coding sequence (CDS) from alignment at sc0000284:59346..65560+

>TCONS_00018041 ID=TCONS_00018041|Name=TCONS_00018041|organism=Clytia hemisphaerica|type=CDS|length=9828bp|location=Sequence derived from alignment at sc0000284:59346..65560+ (Clytia hemisphaerica)
ATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaatatt
tgtttttcaCTCTGTATGGAGTTTACGTGAAATTTTACAAAGAATTTACG
TCGATGATGCAGTTAGTGTTAAAGAGAGTAAATACTGGTTGTTAACATTG
ATTTTAGCACTGATCGTTTTAGAAGGTGCTTATACGGTGATTATAAGGAA
GGGCCACGAATATAAGTATTTTTGGCCCAGTGGATTTATTTACATTCTCA
TTATGATACCAAACACTTGTATTCTCGAATCATTTCTTATGGATGAAGAA
ATCAAATGCACTGCATTATGGGAACAACAAAATCTGAATCCAAAACTTCA
GTATGACGGAGAACAAACAAGACTTTGTCTTGCAGCCAAATCAAAGATGA
AGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGTTAGGGGCT
CTAGTAATGGGTCGTTGGTTGTTGCCGAGAGGTGAATTGACACGTGATCA
GTTATCCGCTTTGCTATTGGCTTTCATTGGGAATGGAGCTGATTGTATTG
AATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATCGTCAAGTA
ACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAATTTGCTGT
TGTTACCACCAAAACTACGGATGAATACAAAGAAGAAATTACTGAAGATG
ACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACACTAATGGA
AATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTACCACGCTACATTCG
AAAATTgatgaaacaaaaaagtaaaacacgTGCTTCATATCACGCTACAC
TTTCTTCAGTCACCCTAGCATTGAAAGATGAACGATCTAATACACTATCT
ATGCCGACATCACCTCAGCGATGTTCGTCATATGAGTTTCGTACGCGCGC
GTTCACGCTGGAAAGCAAACTGATGGATGATAACGTCTTTGAGGATGATC
ATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTCGACGTAAACAAGGT
ACTTTTTTATCAGACGCAGTGAAATCAGATGAtcaaaaaagaagtaaaaa
gaTCCGTTTCCGTGCAGACACCAATTTGAGTACCAATGAAAGAGAAAGCA
AAGAAACTGCTCGTTACTTGCAAACACTTGCACATTATGGTCGATGGGAT
GAATTCTCAAAGGTCTTGAAGCAAGCTAAGAGTTCCGGATTCAATCGTAA
TTCAGTCCGATTTTCCTCTACAACGGAACAGTTGGATGATGACGTCAATA
ACAACGAAACGGAACAAACCAAACAAAATCGTCTTGCAGATTTTTTACAA
CGAATCCCAAAGTTAAAATCAATGAATTTGGTGGaccaagatttttttca
aacctttttcttACTGACAACACTGGAGCTGCCCTATTTCATTGCCAGAG
TTGTGTTTACTGTTAAATATAACGTGTCAAGTACCACAATGGTGTTTTAT
ACTACAAAAAATGTGGTCatgattatttttttgctttacaGACTTTGGGt
gaaattttccgctgatttagATTCTGCGGACCGAGAGGAGACAGATGAGA
ATGGTGATTATTCAAGAGACTTGATGAATgtaaaatgaATGTCGCTATGT
TGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaatatttgtttttcaCTC
TGTATGGAGTTTACGTGAAATTTTACAAAGAATTTACGTCGATGATGCAG
TTAGTGTTAAAGAGAGTAAATACTGGTTGTTAACATTGATTTTAGCACTG
ATCGTTTTAGAAGGTGCTTATACGGTGATTATAAGGAAGGGCCACGAATA
TAAGTATTTTTGGCCCAGTGGATTTATTTACATTCTCATTATGATACCAA
ACACTTGTATTCTCGAATCATTTCTTATGGATGAAGAAATCAAATGCACT
GCATTATGGGAACAACAAAATCTGAATCCAAAACTTCAGTATGACGGAGA
ACAAACAAGACTTTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCAGA
AACTACGTGCAGCTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGGGT
CGTTGGTTGTTGCCGAGAGGTGAATTGACACGTGATCAGTTATCCGCTTT
GCTATTGGCTTTCATTGGGAATGGAGCTGATTGTATTGAATTTCTAAATA
CCTGGAATGATTTTCCTGATTTACGAAATCGTCAAGTAACAGACACGGTC
CTTGTTTTGTATTCGGTCAGTATTTTACAATTTGCTGTTGTTACCACCAA
AACTACGGATGAATACAAAGAAGAAATTACTGAAGATGACCAAAATTTGT
TCGGCGAAGAAACCAGGACCAGAACAGACACTAATGGAAATCTAAAGCCT
GTTCGAACGAGTGCAAGTGGAGTACCACGCTACATTCGAAAATTgatgaa
acaaaaaagtaaaacacgTGCTTCATATCACGCTACACTTTCTTCAGTCA
CCCTAGCATTGAAAGATGAACGATCTAATACACTATCTATGCCGACATCA
CCTCAGCGATGTTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGA
AAGCAAACTGATGGATGATAACGTCTTTGAGGATGATCATTCTATTACAA
GAAGTCAAATTCCTCAAATTCCTCGACGTAAACAAGGTACTTTTTTATCA
GACGCAGTGAAATCAGATGAtcaaaaaagaagtaaaaagaTCCGTTTCCG
TGCAGACACCAATTTGAGTACCAATGAAAGAGAAAGCAAAGAAACTGCTC
GTTACTTGCAAACACTTGCACATTATGGTCGATGGGATGAATTCTCAAAG
GTCTTGAAGCAAGCTAAGAGTTCCGGATTCAATCGTAATTCAGTCCGATT
TTCCTCTACAACGGAACAGTTGGATGATGACGTCAATAACAACGAAACGG
AACAAACCAAACAAAATCGTCTTGCAGATTTTTTACAACGAATCCCAAAG
TTAAAATCAATGAATTTGGTGGaccaagatttttttcaaacctttttctt
ACTGACAACACTGGAGCTGCCCTATTTCATTGCCAGAGTTGTGTTTACTG
TTAAATATAACGTGTCAAGTACCACAATGGTGTTTTATACTACAAAAAAT
GTGGTCatgattatttttttgctttacaGACTTTGGGtgaaattttccgc
tgatttagATTCTGCGGACCGAGAGGAGACAGATGAGAATGGTGATTATT
CAAGAGACTTGATGAATgtaaaatgaATGTCGCTATGTTGGAGGTTTTCT
GCGGCCATTTTAAGTcgtttaatatttgtttttcaCTCTGTATGGAGTTT
ACGTGAAATTTTACAAAGAATTTACGTCGATGATGCAGTTAGTGTTAAAG
AGAGTAAATACTGGTTGTTAACATTGATTTTAGCACTGATCGTTTTAGAA
GGTGCTTATACGGTGATTATAAGGAAGGGCCACGAATATAAGTATTTTTG
GCCCAGTGGATTTATTTACATTCTCATTATGATACCAAACACTTGTATTC
TCGAATCATTTCTTATGGATGAAGAAATCAAATGCACTGCATTATGGGAA
CAACAAAATCTGAATCCAAAACTTCAGTATGACGGAGAACAAACAAGACT
TTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCAGAAACTACGTGCAG
CTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGGGTCGTTGGTTGTTG
CCGAGAGGTGAATTGACACGTGATCAGTTATCCGCTTTGCTATTGGCTTT
CATTGGGAATGGAGCTGATTGTATTGAATTTCTAAATACCTGGAATGATT
TTCCTGATTTACGAAATCGTCAAGTAACAGACACGGTCCTTGTTTTGTAT
TCGGTCAGTATTTTACAATTTGCTGTTGTTACCACCAAAACTACGGATGA
ATACAAAGAAGAAATTACTGAAGATGACCAAAATTTGTTCGGCGAAGAAA
CCAGGACCAGAACAGACACTAATGGAAATCTAAAGCCTGTTCGAACGAGT
GCAAGTGGAGTACCACGCTACATTCGAAAATTgatgaaacaaaaaagtaa
aacacgTGCTTCATATCACGCTACACTTTCTTCAGTCACCCTAGCATTGA
AAGATGAACGATCTAATACACTATCTATGCCGACATCACCTCAGCGATGT
TCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGAAAGCAAACTGAT
GGATGATAACGTCTTTGAGGATGATCATTCTATTACAAGAAGTCAAATTC
CTCAAATTCCTCGACGTAAACAAGGTACTTTTTTATCAGACGCAGTGAAA
TCAGATGAtcaaaaaagaagtaaaaagaTCCGTTTCCGTGCAGACACCAA
TTTGAGTACCAATGAAAGAGAAAGCAAAGAAACTGCTCGTTACTTGCAAA
CACTTGCACATTATGGTCGATGGGATGAATTCTCAAAGGTCTTGAAGCAA
GCTAAGAGTTCCGGATTCAATCGTAATTCAGTCCGATTTTCCTCTACAAC
GGAACAGTTGGATGATGACGTCAATAACAACGAAACGGAACAAACCAAAC
AAAATCGTCTTGCAGATTTTTTACAACGAATCCCAAAGTTAAAATCAATG
AATTTGGTGGaccaagatttttttcaaacctttttcttACTGACAACACT
GGAGCTGCCCTATTTCATTGCCAGAGTTGTGTTTACTGTTAAATATAACG
TGTCAAGTACCACAATGGTGTTTTATACTACAAAAAATGTGGTCatgatt
atttttttgctttacaGACTTTGGGtgaaattttccgctgatttagATTC
TGCGGACCGAGAGGAGACAGATGAGAATGGTGATTATTCAAGAGACTTGA
TGAATgtaaaatgaATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTA
AGTcgtttaatatttgtttttcaCTCTGTATGGAGTTTACGTGAAATTTT
ACAAAGAATTTACGTCGATGATGCAGTTAGTGTTAAAGAGAGTAAATACT
GGTTGTTAACATTGATTTTAGCACTGATCGTTTTAGAAGGTGCTTATACG
GTGATTATAAGGAAGGGCCACGAATATAAGTATTTTTGGCCCAGTGGATT
TATTTACATTCTCATTATGATACCAAACACTTGTATTCTCGAATCATTTC
TTATGGATGAAGAAATCAAATGCACTGCATTATGGGAACAACAAAATCTG
AATCCAAAACTTCAGTATGACGGAGAACAAACAAGACTTTGTCTTGCAGC
CAAATCAAAGATGAAGGATGATCAGAAACTACGTGCAGCTATTGAAATTG
GAATGTTAGGGGCTCTAGTAATGGGTCGTTGGTTGTTGCCGAGAGGTGAA
TTGACACGTGATCAGTTATCCGCTTTGCTATTGGCTTTCATTGGGAATGG
AGCTGATTGTATTGAATTTCTAAATACCTGGAATGATTTTCCTGATTTAC
GAAATCGTCAAGTAACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATT
TTACAATTTGCTGTTGTTACCACCAAAACTACGGATGAATACAAAGAAGA
AATTACTGAAGATGACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAA
CAGACACTAATGGAAATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTA
CCACGCTACATTCGAAAATTgatgaaacaaaaaagtaaaacacgTGCTTC
ATATCACGCTACACTTTCTTCAGTCACCCTAGCATTGAAAGATGAACGAT
CTAATACACTATCTATGCCGACATCACCTCAGCGATGTTCGTCATATGAG
TTTCGTACGCGCGCGTTCACGCTGGAAAGCAAACTGATGGATGATAACGT
CTTTGAGGATGATCATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTC
GACGTAAACAAGGTACTTTTTTATCAGACGCAGTGAAATCAGATGAtcaa
aaaagaagtaaaaagaTCCGTTTCCGTGCAGACACCAATTTGAGTACCAA
TGAAAGAGAAAGCAAAGAAACTGCTCGTTACTTGCAAACACTTGCACATT
ATGGTCGATGGGATGAATTCTCAAAGGTCTTGAAGCAAGCTAAGAGTTCC
GGATTCAATCGTAATTCAGTCCGATTTTCCTCTACAACGGAACAGTTGGA
TGATGACGTCAATAACAACGAAACGGAACAAACCAAACAAAATCGTCTTG
CAGATTTTTTACAACGAATCCCAAAGTTAAAATCAATGAATTTGGTGGac
caagatttttttcaaacctttttcttACTGACAACACTGGAGCTGCCCTA
TTTCATTGCCAGAGTTGTGTTTACTGTTAAATATAACGTGTCAAGTACCA
CAATGGTGTTTTATACTACAAAAAATGTGGTCatgattatttttttgctt
tacaGACTTTGGGtgaaattttccgctgatttagATTCTGCGGACCGAGA
GGAGACAGATGAGAATGGTGATTATTCAAGAGACTTGATGAATgtaaaat
gaATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaata
tttgtttttcaCTCTGTATGGAGTTTACGTGAAATTTTACAAAGAATTTA
CGTCGATGATGCAGTTAGTGTTAAAGAGAGTAAATACTGGTTGTTAACAT
TGATTTTAGCACTGATCGTTTTAGAAGGTGCTTATACGGTGATTATAAGG
AAGGGCCACGAATATAAGTATTTTTGGCCCAGTGGATTTATTTACATTCT
CATTATGATACCAAACACTTGTATTCTCGAATCATTTCTTATGGATGAAG
AAATCAAATGCACTGCATTATGGGAACAACAAAATCTGAATCCAAAACTT
CAGTATGACGGAGAACAAACAAGACTTTGTCTTGCAGCCAAATCAAAGAT
GAAGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGTTAGGGG
CTCTAGTAATGGGTCGTTGGTTGTTGCCGAGAGGTGAATTGACACGTGAT
CAGTTATCCGCTTTGCTATTGGCTTTCATTGGGAATGGAGCTGATTGTAT
TGAATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATCGTCAAG
TAACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAATTTGCT
GTTGTTACCACCAAAACTACGGATGAATACAAAGAAGAAATTACTGAAGA
TGACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACACTAATG
GAAATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTACCACGCTACATT
CGAAAATTgatgaaacaaaaaagtaaaacacgTGCTTCATATCACGCTAC
ACTTTCTTCAGTCACCCTAGCATTGAAAGATGAACGATCTAATACACTAT
CTATGCCGACATCACCTCAGCGATGTTCGTCATATGAGTTTCGTACGCGC
GCGTTCACGCTGGAAAGCAAACTGATGGATGATAACGTCTTTGAGGATGA
TCATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTCGACGTAAACAAG
GTACTTTTTTATCAGACGCAGTGAAATCAGATGAtcaaaaaagaagtaaa
aagaTCCGTTTCCGTGCAGACACCAATTTGAGTACCAATGAAAGAGAAAG
CAAAGAAACTGCTCGTTACTTGCAAACACTTGCACATTATGGTCGATGGG
ATGAATTCTCAAAGGTCTTGAAGCAAGCTAAGAGTTCCGGATTCAATCGT
AATTCAGTCCGATTTTCCTCTACAACGGAACAGTTGGATGATGACGTCAA
TAACAACGAAACGGAACAAACCAAACAAAATCGTCTTGCAGATTTTTTAC
AACGAATCCCAAAGTTAAAATCAATGAATTTGGTGGaccaagattttttt
caaacctttttcttACTGACAACACTGGAGCTGCCCTATTTCATTGCCAG
AGTTGTGTTTACTGTTAAATATAACGTGTCAAGTACCACAATGGTGTTTT
ATACTACAAAAAATGTGGTCatgattatttttttgctttacaGACTTTGG
GtgaaattttccgctgatttagATTCTGCGGACCGAGAGGAGACAGATGA
GAATGGTGATTATTCAAGAGACTTGATGAATgtaaaatgaATGTCGCTAT
GTTGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaatatttgtttttcaC
TCTGTATGGAGTTTACGTGAAATTTTACAAAGAATTTACGTCGATGATGC
AGTTAGTGTTAAAGAGAGTAAATACTGGTTGTTAACATTGATTTTAGCAC
TGATCGTTTTAGAAGGTGCTTATACGGTGATTATAAGGAAGGGCCACGAA
TATAAGTATTTTTGGCCCAGTGGATTTATTTACATTCTCATTATGATACC
AAACACTTGTATTCTCGAATCATTTCTTATGGATGAAGAAATCAAATGCA
CTGCATTATGGGAACAACAAAATCTGAATCCAAAACTTCAGTATGACGGA
GAACAAACAAGACTTTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCA
GAAACTACGTGCAGCTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGG
GTCGTTGGTTGTTGCCGAGAGGTGAATTGACACGTGATCAGTTATCCGCT
TTGCTATTGGCTTTCATTGGGAATGGAGCTGATTGTATTGAATTTCTAAA
TACCTGGAATGATTTTCCTGATTTACGAAATCGTCAAGTAACAGACACGG
TCCTTGTTTTGTATTCGGTCAGTATTTTACAATTTGCTGTTGTTACCACC
AAAACTACGGATGAATACAAAGAAGAAATTACTGAAGATGACCAAAATTT
GTTCGGCGAAGAAACCAGGACCAGAACAGACACTAATGGAAATCTAAAGC
CTGTTCGAACGAGTGCAAGTGGAGTACCACGCTACATTCGAAAATTgatg
aaacaaaaaagtaaaacacgTGCTTCATATCACGCTACACTTTCTTCAGT
CACCCTAGCATTGAAAGATGAACGATCTAATACACTATCTATGCCGACAT
CACCTCAGCGATGTTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTG
GAAAGCAAACTGATGGATGATAACGTCTTTGAGGATGATCATTCTATTAC
AAGAAGTCAAATTCCTCAAATTCCTCGACGTAAACAAGGTACTTTTTTAT
CAGACGCAGTGAAATCAGATGAtcaaaaaagaagtaaaaagaTCCGTTTC
CGTGCAGACACCAATTTGAGTACCAATGAAAGAGAAAGCAAAGAAACTGC
TCGTTACTTGCAAACACTTGCACATTATGGTCGATGGGATGAATTCTCAA
AGGTCTTGAAGCAAGCTAAGAGTTCCGGATTCAATCGTAATTCAGTCCGA
TTTTCCTCTACAACGGAACAGTTGGATGATGACGTCAATAACAACGAAAC
GGAACAAACCAAACAAAATCGTCTTGCAGATTTTTTACAACGAATCCCAA
AGTTAAAATCAATGAATTTGGTGGaccaagatttttttcaaacctttttc
ttACTGACAACACTGGAGCTGCCCTATTTCATTGCCAGAGTTGTGTTTAC
TGTTAAATATAACGTGTCAAGTACCACAATGGTGTTTTATACTACAAAAA
ATGTGGTCatgattatttttttgctttacaGACTTTGGGtgaaattttcc
gctgatttagATTCTGCGGACCGAGAGGAGACAGATGAGAATGGTGATTA
TTCAAGAGACTTGATGAATgtaaaatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010115XLOC_010115Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018041-proteinTCONS_00018041-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018041-exon-sc0000284-1491911889:59346..59671TCONS_00018041-exon-sc0000284-1491911889:59346..59671Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1510915933:59346..59671TCONS_00018041-exon-sc0000284-1510915933:59346..59671Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1575043694:59346..59671TCONS_00018041-exon-sc0000284-1575043694:59346..59671Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1491911889:60147..60279TCONS_00018041-exon-sc0000284-1491911889:60147..60279Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1510915933:60147..60279TCONS_00018041-exon-sc0000284-1510915933:60147..60279Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1575043694:60147..60279TCONS_00018041-exon-sc0000284-1575043694:60147..60279Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1491911889:61025..61223TCONS_00018041-exon-sc0000284-1491911889:61025..61223Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1510915933:61025..61223TCONS_00018041-exon-sc0000284-1510915933:61025..61223Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1575043694:61025..61223TCONS_00018041-exon-sc0000284-1575043694:61025..61223Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1491911889:61667..61875TCONS_00018041-exon-sc0000284-1491911889:61667..61875Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1510915933:61667..61875TCONS_00018041-exon-sc0000284-1510915933:61667..61875Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1575043694:61667..61875TCONS_00018041-exon-sc0000284-1575043694:61667..61875Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1491911889:62489..62777TCONS_00018041-exon-sc0000284-1491911889:62489..62777Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1510915933:62489..62777TCONS_00018041-exon-sc0000284-1510915933:62489..62777Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1575043694:62489..62777TCONS_00018041-exon-sc0000284-1575043694:62489..62777Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1491911889:63892..65560TCONS_00018041-exon-sc0000284-1491911889:63892..65560Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1510915933:63892..65560TCONS_00018041-exon-sc0000284-1510915933:63892..65560Clytia hemisphaericaexon
TCONS_00018041-exon-sc0000284-1575043694:63892..65560TCONS_00018041-exon-sc0000284-1575043694:63892..65560Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000284supercontigsc0000284:59346..65560 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.88546	1.87794	0.585371	0.481529	35.1391	21.9455	12.346	12.5996	22.2214	20.5307	17.4497	20.1068	0.297936	0.0939093	0.115649	0.0909175	0.0613201	0.0835832	0.187595	0.211326	0.196731	0.230271	1.19884	0.961313	0.860154	0.533129	0.148881	0.317538	0.784964	0.506959
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019169Transmembrane_26
Blast
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BLAST of TCONS_00018041 vs. Swiss-Prot (Human)
Match: TMM26 (Transmembrane protein 26 OS=Homo sapiens GN=TMEM26 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.801e-18
Identity = 76/233 (32.62%), Postives = 120/233 (51.50%), Query Frame = 1 
Query:  127 FSAAILSRLIFVFHS---VWSLREILQRIYVDDAVSVKESKYWXXXXXXXXXXXEGAYTVIIRKGHEYKYFWPSGFIYILIMIPNTCILESFLMDEEIKCTALWEQQNLNPKLQYDGEQTRLCLAAKSKMKDDQKLRAAIEIGMLGA-----------------LVMGRWLLP-RGELTRDQLSALLLAFIGNGADCIEFLNTWNDFPDLRNR-QVTDTVLVLYSVSILQFAV 759
            F  A+ +RL+F+ HS   VW + E+            KE +YWLL L+  L+ LE A T+  ++G  YK+F P+ F+Y++ ++P+  +LE  L  E   C+   E  + N   + D  QT L    ++   DD    A + +  L                   L++GRWLLP  G +TRDQLS LLL F+G  AD +EF +   +  ++RN   +   +LV+++ S+LQF +
Sbjct:    6 FLNALATRLLFLLHSLVGVWRVTEV-----------KKEPRYWLLALLNLLLFLETALTLKFKRGRGYKWFSPAIFLYLISIVPSLWLLE--LHHETQYCSIQAEGTSQNTSRKEDFNQT-LTSNEQTSRADDLIETAKVFVNNLSTVCEKVWTLGLHQTFLLMLIIGRWLLPIGGGITRDQLSQLLLMFVGTAADILEFTSETLEEQNVRNSPALVYAILVIWTWSMLQFPL 224
The following BLAST results are available for this feature:
BLAST of TCONS_00018041 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMM261.801e-1832.62Transmembrane protein 26 OS=Homo sapiens GN=TMEM26... [more]
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