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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018037 ID=TCONS_00018037|Name=TCONS_00018037|organism=Clytia hemisphaerica|type=transcript|length=1013bp
aaaaataatccTAGGGGGAGACTAAACACTCAAGGTTTTTTTAGTCACCA
AaccttttttaagttttaaggcTGAGGTTTTCGGCTTTTTGGCATCTTGT
ACAGTATAATTTCGTTTCGCGCTCTTCGTCATTTTTCGTCCATCCTTTAG
AACCCATAATCCGGGGTAAAAGTTTGTTGTAGGCACNAAACGAAATAAAA
CTTGGCGATTGCATAAAGCTTTCAAGCAGCAAGTATAACTTCATGCATAG
ATATATTTGGGTTCAGAGATATCTCGGAAAACAATATTTCTGTTGGCTTG
AAGCTCGACCAAATACCAATTGTTTCTTCAGCGTAAATGCGTATGATTTA
CAAACAGGTGGAGAATCAGTTGTATACAAATTTGAAGAACCATTTTATGG
AGATTGTTATTTGAATTGGAATATGAGAGAAATGGCATTAGTTGGAGAAT
TGGATGATGAAGAGGGAATCAAACGTCTTTGTGTTGAAAGAATTCCCTTC
TTTTTGAGTTCGGATTCGAATTGTGGTTCTCTCAAAGAACAAGCACGTTT
TGTTTGCTTGAACAATTTCCATGAAGGTTATCTGTGTCAAAAACTTCCGA
AAGATCTTTTACGATTTCTTGACATTTTGTAGTAATTTGTGGATATCCCT
ATAGCTTTTCCTACAGGAGGTTGGGATAAATCCTACCCGGTGctgcgatt
cacttggcaagtgattGTATGTATTACTACATACTGGTCAACACACAATG
TAAAGAATCagttttatacaaatttgaaaaaccATTTTATAGATACACGA
AAATGGAAGATTAAAACACGTTTTCCGAAACTTTCGCTGATTATAATTTT
GCATCATCTGAGGAAATTCACTCCAAACATTTTTGACGACGTCATGCATC
TTCACACTTACAATTTTTTGTACATGTCTTTTTTTAGAGTATATATTTTC
ATTAAGATAATGATATTGATTTTATTCGCCTCGGGTGACTCAAAATATTG
TTTACGTCCTGTG Run BLAST on NCBI protein sequence of TCONS_00018037-protein >TCONS_00018037-protein ID=TCONS_00018037-protein|Name=TCONS_00018037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
MHRYIWVQRYLGKQYFCWLEARPNTNCFFSVNAYDLQTGGESVVYKFEEP
FYGDCYLNWNMREMALVGELDDEEGIKRLCVERIPFFLSSDSNCGSLKEQ
ARFVCLNNFHEGYLCQKLPKDLLRFLDIL Run BLAST on NCBI transcript from alignment at sc0000282:346858..347870 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018037 ID=TCONS_00018037|Name=TCONS_00018037|organism=Clytia hemisphaerica|type=transcript|length=1013bp|location=Sequence derived from alignment at sc0000282:346858..347870 (Clytia hemisphaerica)
CACAGGACGTAAACAATATTTTGAGTCACCCGAGGCGAATAAAATCAATA
TCATTATCTTAATGAAAATATATACTCTAAAAAAAGACATGTACAAAAAA
TTGTAAGTGTGAAGATGCATGACGTCGTCAAAAATGTTTGGAGTGAATTT
CCTCAGATGATGCAAAATTATAATCAGCGAAAGTTTCGGAAAACGTGTTT
TAATCTTCCATTTTCGTGTATCTATAAAATggtttttcaaatttgtataa
aactGATTCTTTACATTGTGTGTTGACCAGTATGTAGTAATACATACaat
cacttgccaagtgaatcgcagCACCGGGTAGGATTTATCCCAACCTCCTG
TAGGAAAAGCTATAGGGATATCCACAAATTACTACAAAATGTCAAGAAAT
CGTAAAAGATCTTTCGGAAGTTTTTGACACAGATAACCTTCATGGAAATT
GTTCAAGCAAACAAAACGTGCTTGTTCTTTGAGAGAACCACAATTCGAAT
CCGAACTCAAAAAGAAGGGAATTCTTTCAACACAAAGACGTTTGATTCCC
TCTTCATCATCCAATTCTCCAACTAATGCCATTTCTCTCATATTCCAATT
CAAATAACAATCTCCATAAAATGGTTCTTCAAATTTGTATACAACTGATT
CTCCACCTGTTTGTAAATCATACGCATTTACGCTGAAGAAACAATTGGTA
TTTGGTCGAGCTTCAAGCCAACAGAAATATTGTTTTCCGAGATATCTCTG
AACCCAAATATATCTATGCATGAAGTTATACTTGCTGCTTGAAAGCTTTA
TGCAATCGCCAAGTTTTATTTCGTTTNGTGCCTACAACAAACTTTTACCC
CGGATTATGGGTTCTAAAGGATGGACGAAAAATGACGAAGAGCGCGAAAC
GAAATTATACTGTACAAGATGCCAAAAAGCCGAAAACCTCAgccttaaaa
cttaaaaaaggtTTGGTGACTAAAAAAACCTTGAGTGTTTAGTCTCCCCC
TAggattattttt Coding sequence (CDS) from alignment at sc0000282:346858..347870 >TCONS_00018037 ID=TCONS_00018037|Name=TCONS_00018037|organism=Clytia hemisphaerica|type=CDS|length=390bp|location=Sequence derived from alignment at sc0000282:346858..347870 (Clytia hemisphaerica)
CTACAAAATGTCAAGAAATCGTAAAAGATCTTTCGGAAGTTTTTGACACA
GATAACCTTCATGGAAATTGTTCAAGCAAACAAAACGTGCTTGTTCTTTG
AGAGAACCACAATTCGAATCCGAACTCAAAAAGAAGGGAATTCTTTCAAC
ACAAAGACGTTTGATTCCCTCTTCATCATCCAATTCTCCAACTAATGCCA
TTTCTCTCATATTCCAATTCAAATAACAATCTCCATAAAATGGTTCTTCA
AATTTGTATACAACTGATTCTCCACCTGTTTGTAAATCATACGCATTTAC
GCTGAAGAAACAATTGGTATTTGGTCGAGCTTCAAGCCAACAGAAATATT
GTTTTCCGAGATATCTCTGAACCCAAATATATCTATGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018037-exon-sc0000282-1491911889:346858..347870 | TCONS_00018037-exon-sc0000282-1491911889:346858..347870 | Clytia hemisphaerica | exon |
| TCONS_00018037-exon-sc0000282-1510915933:346858..347870 | TCONS_00018037-exon-sc0000282-1510915933:346858..347870 | Clytia hemisphaerica | exon |
| TCONS_00018037-exon-sc0000282-1575043694:346858..347870 | TCONS_00018037-exon-sc0000282-1575043694:346858..347870 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282 | supercontig | sc0000282:346858..347870 . |
Blast
The following BLAST results are available for this feature:
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