TCONS_00017975 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017975
Unique NameTCONS_00017975
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017975 ID=TCONS_00017975|Name=TCONS_00017975|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GATTCATATCACATGAtgagGTGCTTCTGGTTCCACAATTAGCCGATTTG
AAGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGA
CCAGAATAAAGATGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATT
TATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGA
TTACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGA
TTTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGAT
TATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCG
CTacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGA
CAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAG
ACAAAAAATGCCGCGTTTGCAGATATCTTTCTTTCACCATGTTCTTGAAC
GATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTT
CAAAGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACT
CCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACA
CCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGG
TGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGAGAAAcggtgaaat
ttgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAA
GGGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATA
TTGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGA
ATCGAGAGTTTGAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGA
AACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAA
AGCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTG
GACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGG
GTCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCT
TAAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAA
AAATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAA
ATCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAAC
TGGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTA
ATGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAA
TTATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTAT
GTAAG
Run BLAST on NCBI

transcript from alignment at sc0000282:122443..135334+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017975 ID=TCONS_00017975|Name=TCONS_00017975|organism=Clytia hemisphaerica|type=transcript|length=12892bp|location=Sequence derived from alignment at sc0000282:122443..135334+ (Clytia hemisphaerica)
GATTCATATCACATGAtgaggtttgttttgatttctccCTCCGAAGAAGG
GTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTACTTT
GGGATTATAATCAAGACAGATTCATATCACATGATGAGGTTAGTTTTGAT
TTCTCCCTCCGAAGAAGAGTCTCTTAGTTAAAAGTTTTTGTATAAGGTTG
TAAGTAAACTCCTACTTTGGGATTATAATCAAGACAGATTCATATCACAT
GATGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGAATCTCTTAGTTAAA
AGTTTTTGTATAAGGTTGCAAGTAAACTCCTACTTTGGGATTATAATCAA
GACAGATTCATATCACATGATGAGGTTAGTTTTGATTTCTCCCTCCGAAG
AAGGGTCTCTTAGTTAAAAGTTTCCGTAAAAGGTTGTAAGAAAACTCCTA
CTTTGGGACGGATTTTATATCACATGAtgaggtttgttttgatttctccC
TCCGAAGAAGAGTCTCTTAGTTAAAAGTTTTTGTATAAGGTTGTAAGTTA
ACTCCTCCTTTGGGATTATAATCAAGACGGGTTCATATCACATGATGAGG
TTAGTTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCC
GTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGAT
TCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCT
CTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGA
TTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTC
CCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGT
AAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGA
GGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCC
CGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGA
TTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTC
TCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGG
ATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCT
CCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAG
TAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATG
AGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTC
CCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGG
ATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGT
CTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGG
GATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTC
TCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAA
GTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGAT
GAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTT
CCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACG
GATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGG
TCTCTTagttaaatatttttgtataaGGTTGTAAGTAAACTCCTCCTTTG
GGATTATAATCAAGACAGATTCATATCACATGAcgaggtttgttttgatt
tctccCTCCGAAGAAGAGTCTCTTAGTTAAAACTTTCCGTGAAAGGTTGT
AAGTAAACTCCTTCTTTGGGATAACTTCAAGACGGATTCATATCACATGT
TGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGGGTCTcttaattaaaag
tttttcgtATAAGGTCGTAAGTAAACTCGCATGATCTCTATGCGAAGGTC
TCTTTTTAAAGGttatcaataactcttgatgtCCAAGTTAGTAATTTTTC
ACTGCGAagaagggtaccttttttaggGAAACtttacaccttttcgactg
tagtcgcgcggtcaggtgcgTGCCACTATATTATTTAATTACCCCCCAAA
TCAATCCAATCCTTCTTTTACACCTTTTTTCTGTTGTCCATAGGTGCGAA
AAAATGACTAGGACTGTTTTAGGGTGGTGAaaaggacaaaaaatgcccac
gtggcaattggcggctacggtcgaaaaggtgtattgcgtCCCTCACACGA
CTTAAGGtttaatctcaaaattaataccttatgaaatttagagttttact
gtggtggtcatctttgagattgagattgcccttttttcatgtagaggaat
agtcgatgttttcatatgacaaaaaggccaatctcaaaggcagaacagga
ttgcaagatttccaattttccaagacacttattttgagattgaaccttta
gttAGCCTTTACGAATGCCCTCAACagatattgggcttttccagaaaaaa
atcgtgcaccccctgttgaggaggtccatttccgttccaagggggtaagg
tttgaaatgtagtggaattccataagggtagacgaaaatccgtcaaaaat
aagcggaattccaagggggtaatgattgaaaatttgtaaaaattcggaat
tccagaggggtttgaTCCTAAAactgcctggaattccaagggggtaggtc
acaaaaggttgaacctcctcaacagggggtgcacggttttttcctggaaa
agcccagctggaaagaaaaaactttgttttaacGGCTATACAAAACAAAC
TTTTCCACAGGTGCTTCTGGTTCCACAATTAGCCGATTTGAAGATGAATT
TGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGACCAGAATAAA
GATGGTAAGATTACTAGCTATATTGAGAGAAGAGTTTTACACATCCAGTT
TCCTGGTTATCCAATAGCAACTTTTCTAATTTTGTGAGTATAAATTTCAT
AGGGTGGTGAATTATACTGGAAAGAAATAAAGCGGTCAACTTCTCTGCTA
GATGATGTTAGGTTAAGCCTGGGATTAAGGGTGTAGGACAGTTGTAATTG
GGCGTaatcagctggcacacaacgttgcttcaacgttcatctaacattat
atggacgttgggaACATCATATAAACGtcgaaagaacgttgtgtgtcagc
tgggtaatcaaaacaaatcaaaacttgATCTAATTTCTATCAATATAAAG
ACCAGCAACATTTCAAGATGGTGAGCATCAAAGATtacatcccagctggc
acacaacgttgtttcaacgtttatctaaatgttatatggacgttgtgaac
gttagataaacgttgaaacaacgttcataaaatacacttttttcatTCAG
GAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATTTATCTTCCATTGGC
AATTACGTCACACAATTACGTCATGATCCATCACGATTACGTAATGTGAC
GGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGATTTGTTGAAATATG
AAAAGAACGGATATTTTGAAGACTATCACGCCAGGTAGGTGATGAGTACC
taaccaaaaaccgggatttttcattccgCTTTTTGGTGAGATAAAGCCTA
TACTAGACGGTATGGCTTTTTTTCTGCGCAGTagcgtctattccactttg
ctaTTCCACTTtgtgactttttcgaatgtttggagctcaacttttctaga
tccaaacattcgattttttttgccgtcactttaaactttcgaaCCTCTTG
CTGTAGGGGAAAATATAATTTACTTCAGAATACTTAAAAGGCTTCTTTCA
CTAGAATTAAAGGCCGTTACATATCATCATCATTGAcgagcaatgatgat
gatgatttagGGTAGCCCCAATCGAAACCTAAAAACTTGTGGTGTCGGAA
GGCAAAATTAGATTCAGTAGATTCATCCAATGTATCTTGTGTTTAGATTA
TCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCGCT
acaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGACA
GCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAGAC
AAAAAATGCCGCGTTTGCAGgtaggttttatttttatattagaTCTAAAC
TTTCCGCTATGCTTTTCAAGGCTGTAagcattgagtttgaagcccagAAG
TGGCTAGAGAGtaatctttaacctttcctaAGGTGAGGCTTATTCAATTT
GTTGTTTAAGCTACCAAAAAAAGAGGGTTGTttggtcggcgaaaaaataa
aaataaaagtagaatttcacctataaaatctccaCAAAAAGCAGCAAAAA
CTACTTCCTCTTGACAAAAAtgtgaaatagaaaataaaaagacacaaaaa
ggttGAATACatggatgaaatgaaaaatttaacataaaattctcaaaagc
ttggaaaaactaccaaaattttgaaaatttgtgagTCTGATCTTTTGATT
CAACATTAAATCATCGAACAAACACAATGTCAAATTCAGTCTCTTTATTc
gcgttgtttttttttcaaaaatccctAAAAATGACCCTTTTGACCTTTTG
ATGACGTTATAATATTTCATGCaccattttagaattttgatGTAATTGGT
GCCTATAATGTGGATATATTTCAAGGACATTGGACTACCCTGCTAGAAAT
CATTGAAGGGGGTTTAATGTCCCCccccccaggggggggggggggggggg
gaaaaaaatttttaaaaaaaaaattttttttttaaaaaaaatttcccccc
ccccccccccccccggggggggggggtggaggcgAAATGATCTTATAATC
AAGAACTTCTCATTTGAAAACGCCTATCAAAAACTGAATCTCACTTTGGT
TCAATGTtgacaaagaaaaatatatttgaaaaataagattaattaaaatt
acaataaaatAGTTAATTAAACTTTTGAAGGCAATGCATTCAGGTAAAAA
TAGCCttctgtttttttgtttgtttttatttccaaTAGTAGGAAAAGTCT
GGATAATTCTTCTCATATCTAATTATCTGATGCCATTACTCGTGGGTGGG
GAAAAACCATACAAAAATAACGAGTTCATTTCTGTTGGACGTGCAGATGT
GCATTTGAAATATTACAGTCGTTGCCTTGGAAACGGCTAACAAACTTAAC
TTACTGGTAGACATGAATGAAAACAATAGCTGATTTCAAATCGCCGTAAA
AAAAATCTTCAGGAATATCTTTGTAAGACCATTGTTCAAAAGTGTCACGT
TTGTTAATTCTTACCATTTGTGCGCATTTATTTGAATCGGTAGGGTGGAG
CACAGAAATGGTTACATTCTCCCATAGGCTTTTTGGGAGCCCTTGAACCA
TAAATAATCGTTTTTGTTCCAACATAAGGCACGTGCTCAAAACTAAACCC
AAGTAATCTTTACACTCTTCAAATTCCTTCTTCATAAAGGAGAATTTTTT
CGTTCTGTAAAGTTCTTTGTTCCCCATAAAGGAACTTATATTTTCATACC
ATTCCTTATACGAGGGGTACAAATCAACCCGTTGTGTTATGTTTCCTTCA
AAAAACATCTCAGCTCCCCAAACAAGTCGACCTAGCTTAGAAACAGGAGG
ATTTTGTGCATCATTTTGTCCCAGCTTTATTTTAAGCAACTCAATTTTAT
GTTTTAGCGTTTGAATTTCACCCTCCAAAGCACGATTAACTGCAGCTTGT
TTTTGGTCTACTTTTAGTTTAATAATTTCTTGGTCATGTTTGAgattttg
gatttctttttccATCTCTAAACACTTTATCTGGTGtttcagattttctt
tttccttgtCTTCTCTCAACTTTGCATTTTCTTGTTTAAGtctttgaatt
tcttccctCGGATCCATTCCTCGATCGACTGCGCAGTGTGCTTCGTTCAT
TGTGATTATGATTAAAGTTTCTCCACTTTACTTTTTTACGTACAACTTTC
ACTTCTATCTAAATTATCGTCAATCATGAAAAGTTTTCGATATCAAAGGT
TCAAACCCCCCTATGTTTAAAAAATCTACAACTTTCCTGTACATATAATG
AATTGTGTTTTCAAGTATATTGGCTAAAAATGCCTTCtaataccactatt
tattacctATTAAATACAAAATTAATCTTTCAATaccattattttatttt
atttgttatcTAATTAATGTGCATTTAGCATCGACAAGTATTTTGAGTAT
TTGTTATTAGAAAATGTATGGTTTTCGATCcgaaattttttaacaaaatc
tagAACTAGAGTCGTTGTTGTATAAAAGATTATTTACTCGAAATCGATTT
TTTCCAGAGCGAAGCCTCACTCAGAtatgaacaattttataaaggACCAC
GAGGCTGAAGTTTTGCAGAAACTTAAGAACATTCTGAACGACGAGGCTTA
AGTTTTGCCGAAACTTAAGAACATTCTGAACGACGAAttataaagtttta
aaataagaaatcgaaataataagaacaagtgaggttaagtcaaaattttc
aaaatttaatccaGTTCATCTGATTTCCACTCATAGATATCTTTCTTTCA
CCATGTTCTTGAACGATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTC
GCCAACAACCCCTTCAAAGTGAGTTCAAAATGTTATTTTAATCCACAAGA
GGATATAGAAGTCATTTGCTATGAAAGTTTGATTCGAGGCAACCAAAAAA
AATTGCCGATCCAGAAcactactctgatacaagagtgtgggtgatatgcc
agacattgtggtgtgtggTTTTACTCATCCCGTTCTGTGCCTGAGACGAG
CTATATGCTCTCCCGCGTAGTCCAAGTGTCACCACTATACATCATGGTAT
CTGTGTCTCGCCTGCACAGAACCAGCGGTGTCTGGACAGTGCTATGCATT
CCTACTTGAGAAAGGAGGAAGGAGTAGTATCCATTCCCCGATGTGGAGGA
CTCTTATCATTGTATCAACAACTGCGAAAAAGTGTGAGTCCACGCAAAAT
GGAAGCTTGGATGCTTGATAGGCTGTAGATCTAGAACGCCATCGCTTAAT
TAAAGTTGTTTGATGGTTGTTTTTTGAATACATTCAACTACCATTGATTT
GTTTTCAGGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTA
TACTCCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTT
CACACCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAA
ATGGTGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGTATTTAAATG
ATTTTTAGGACTTTAGAGTTCACTTTgtcaacaatttaaaaaaactagac
catagatttataaagcccgaagggctagatgtcctGAGATGTCGTGCTTT
TTGTCGTGAGGTtaagtaggaaatcctacctaggtcacgtgatattacaa
tagaatttcagcgcttgaccaagaAGAAGCTCTGGcagtcaagaacacct
tcaaattagcctatcatagactgattagcctatcataggctatttagact
attttatataggctatttagccgaaaatcgaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTGATAATGA
AGTTCTGCTGAATCGACAAAAAGCCCGATTTTCTTACCCTGCGCATGCGC
ACGCATGCGCAGTaccaaaaagtggaatatttcctaaaccaaaactgacc
caaagtcaaaatttgtcatgagcatttctctgacaatgagaaaccatgta
ttccttagagaagacgcgactatttatatttcgtcataaatcgaggtttt
tatcgattttcggctaaatagcctatataaaatagtctaaatagcctatg
ataggctaatttgaaggtgtcctTGACTGTCTgggggttttcgaaaacaa
tagcagcaatattatttgcgatattcacttttttcttttgcttggaagag
cttaaagcacgacaccTAGCCCTTCGGGATTATTTTACGGGATTTTGTCG
ATGTTTTATCTTTTAGCtagaccactgacctttataaagcATGGACAAAG
CTATATCTACCATCTTTGACTACTCGATGTGGGGTCAATTTatatttcaa
tgaaatttaCTGCGTTTAACAAAGGTTTCCACCCACCGAAAAACTCTGAT
AAAAAATTTGAGTGACTGTGTCCAAGCAATATAAAGGTCAGTAAGCTAGA
CTCCTTTGTAGTGTAGTCTTGAACAACTTAAActaacaaactttaaacat
actgaaatgaaaatcaaaatcaaaaacaacaaactttGTCTCTTTATTGT
GTTATATTTTCACCGGGATTTTCGCTTCCTTGACGTTAGAAAAATGGCGT
CTGAAATATATTGGCAAAAAGTGAATTCGTCTCGATTTCATGCAAAATTC
TGATGCTATTTCGTTTGAAACTTTTGCCTGTGGCATTTTCAAATTATATC
ACCTtttcttttaacattttcttttaacTGTCCCTTCAACATTTTGACCA
TTTCTATCATAGACCGTTTCACGGTCGAAATGAATTATGGGTAATCATGA
CTGATTAAATCAACGACTTCTCTTTAACACAATCAGAATTTTAGAGCAGC
GCAACAGAAGGATGCAATGAAACGCTGTGGTCCTACTTACCCATGATTCC
TTCGACCGTGAAATGACGTATATAAGTAAGTCCGATTGGGAAATAtagac
cacagatatcttataaaacactagataaagCTACTCTATCCTGCTTTACC
AAGCTAAGGAGGGAAGCAAAATAATACGCCATCTTTGCTGAGAGTAGGTC
ACAGTAGAAGCCCAGGTTTTCACTGTTGAAGTTTTTTTGActctgcaatg
acttcaaaatttcaaggatcGCGCAAACGAAATTGTGACGTCAGTTTATT
CAAGATAGCGCGTCATTTTGCTTCAAATAGGGATTAAGAGGAAACTCTAT
CGAGTgctttatataagatatctgtggaaGAGACAGGATCTCCCACTTCA
AGGACATTCTTCTTTCGCATCTAGGAGAAAcggtgaaatttgaaaaagtt
tacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAAGGGATTCGTTA
CCATGGAAAGATCATTGAACAGACACAAATCATGGGATATTGGTGGGTTC
CTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGAATCGAGAGTTT
GAGGTACGTCTTttacgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttctcAGCTCTTCTTGGAGgaatattggaaagatattccca
attcaaaatttcgtgtcattataagcattttgtttgattttactcgtctg
atgatttttttctcacacaccagatttcataactGTGTCCGTTTGGTATT
CTGGCAttattgttttcaaacttttggccagcaaaagtacgaatagaaaa
agttagagaactttttagaaataagagtatttatcatttttcaaaatcag
agtccttcgagccgccatgacagttgtcctttgcggacaaagcctgtaca
ttgattgttttctgaaacaatagaaagacaatacttcgctctccagtttc
attcgatgtttatccagagtctctataataaatccatgatgTGACGAagc
ctaatttttgaaaaagaaaaattcttggTTCCCACATTTTCTCAAGGCCT
TATTTATCGGTAGTTtagctttctctgaaatttaACCTGTGGAGACGGAC
TATAAGAATTTCATTGCGCATGTCTCAATCATAAATGACACGACCTTCAA
CCAAGATTCTGGGTGATTCCCATGGCAACTTTTGTCTTCGTTAAATGTGC
TTTGAAAAGAATATCTGTCGTCACAGTgtactttttttcttctatttggt
tgagtcgcaggaggctttgaggcccattttcgcaactatagacgctttca
attNATTGAGTCGCAGGAGGTTTTGATGCCCATTTTCACAACTATAGACA
GATAGACGCTTTCAATAAGctccccgtcagcaccttgaactaactaccca
attcccctcacatggcatgggttgacccgggcgaaggttcattcacttgc
caagtgaaccgctgcgagtgggaatcgaacctcagttgcctgtgcagcaa
ccaaggtcaatgaccactataccacagcgcctgtACAATTCACACACTGT
GAAGCTCATTATGCTAAATCAATTTCTTAATTACCAGTATGTGCACAATT
TactatcattaaaaaaaaattaaatccgcTTTTTTGTCAGCCATAGTTTC
CTCCCCCTTTTCTGCTAGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNggggggggggggattttttggaaactttttgccaa
agaaggggggggggagaaaaaaacatatagtctgaatcacagacctctat
agatataggTACTTGCTATAAGAAATCTTTTCGATAGAGGATGAGCATAG
GCCTGACCTTCAAATAGACCCTGGAGGCAGTTTTTCGGCcctggccaagc
aaaatctttagATCGGGGTTTCTTTGAAAGGGTACcttaccctaatggta
gcactattAGTATGCATCGATACTACTTGTGATGCAGTGCTACTTCGATA
GTTTCTGTATGTGGCTCCcacgcaaatttttttccgtacatggaAAGTAT
CATCGAtggtcgggagtatctcatattttttgtttggttttgttgtttgg
aattgcttaggtcagggttgctagtaacggctcgaatttcagtcaggtta
aaaaaggggcaattttacccatattataataacattaccccgtctttttt
gtcattataTAAGTATTTCCTAATGttgtgttctgctgtgcgagtgtggc
tcaacggatagcgcgctgggtttctgatcagaaactctttcatttggtgg
gttcgaaccccggtcgggtctatatttcaaggtttaagataagtttaaga
tactccggcccgtcgatgatactcccgaccgtcaagatgagatactcccg
accatgtacggaaaaaaatttgcggcTCCCACTTTTAAAAAAcaccaatc
aaagatggcgcatAAAGCTCTGTCCATGATTATAAAGACCAGTGTTGTCA
TCCCGTTTAAAATGATACCGTTAATCATATTATTTATGCCCCCTTTTTCA
GATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGAAACGAAGGTTGTT
TGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAAAGCTGTTTTCTGG
TACAACCATCATTTGAACCCCCTGAATGATATGGTTGGACCTTTAAATCA
TGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGGGTCAAATGGACCG
CGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCTTAAATTACGTACG
TGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAAAAATGCGGAAAAT
TTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAAATCGAGGAATACG
AAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAACTGGGAATGATTCT
GCAAAGGATTCTGGGTATAAATATAAACAATCGAGTAATGCATTGCAAGC
GTTGAACCTGTTGGTGAACGATTTATCGAATGAACAATTATCCATAATGG
CAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010080XLOC_010080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017975-exon-sc0000282-1491911889:122443..122462TCONS_00017975-exon-sc0000282-1491911889:122443..122462Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:122443..122462TCONS_00017975-exon-sc0000282-1510915933:122443..122462Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:122443..122462TCONS_00017975-exon-sc0000282-1575043694:122443..122462Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:125403..125496TCONS_00017975-exon-sc0000282-1491911889:125403..125496Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:125403..125496TCONS_00017975-exon-sc0000282-1510915933:125403..125496Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:125403..125496TCONS_00017975-exon-sc0000282-1575043694:125403..125496Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:125993..126176TCONS_00017975-exon-sc0000282-1491911889:125993..126176Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:125993..126176TCONS_00017975-exon-sc0000282-1510915933:125993..126176Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:125993..126176TCONS_00017975-exon-sc0000282-1575043694:125993..126176Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:126589..126762TCONS_00017975-exon-sc0000282-1491911889:126589..126762Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:126589..126762TCONS_00017975-exon-sc0000282-1510915933:126589..126762Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:126589..126762TCONS_00017975-exon-sc0000282-1575043694:126589..126762Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:129229..129310TCONS_00017975-exon-sc0000282-1491911889:129229..129310Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:129229..129310TCONS_00017975-exon-sc0000282-1510915933:129229..129310Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:129229..129310TCONS_00017975-exon-sc0000282-1575043694:129229..129310Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:129801..129981TCONS_00017975-exon-sc0000282-1491911889:129801..129981Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:129801..129981TCONS_00017975-exon-sc0000282-1510915933:129801..129981Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:129801..129981TCONS_00017975-exon-sc0000282-1575043694:129801..129981Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:132517..132695TCONS_00017975-exon-sc0000282-1491911889:132517..132695Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:132517..132695TCONS_00017975-exon-sc0000282-1510915933:132517..132695Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:132517..132695TCONS_00017975-exon-sc0000282-1575043694:132517..132695Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1491911889:134794..135334TCONS_00017975-exon-sc0000282-1491911889:134794..135334Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1510915933:134794..135334TCONS_00017975-exon-sc0000282-1510915933:134794..135334Clytia hemisphaericaexon
TCONS_00017975-exon-sc0000282-1575043694:134794..135334TCONS_00017975-exon-sc0000282-1575043694:134794..135334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:122443..135334 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0726311	0.0616002	0.0460132	0.039925	0.394624	0.376353	0.780784	1.35931	0.223345	0.153786	0.655312	0.41718	0.398106	0.345501	0.300971	0.624782	0.622087	0.532259	0.047528	0.0479718	0.364767	0.2377	0.169877	0.168515	0.31011	0.358521	0.0557429	0.0305707	0.107819	0.0887032
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017975 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top