|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017956 ID=TCONS_00017956|Name=TCONS_00017956|organism=Clytia hemisphaerica|type=transcript|length=1075bp
aagaaacaatgactatacgccgatgtgcatacgagacctaactcagcccc
tagagtataatttaaatataatataatatatctTTTTAGTATTTCTTAGT
TTTAATTGCTTAGATTAGATAAACTATTTAACAGGTTCTTTTTCATAGTT
TTAGATCCCTTCAAGAAAATTTGTTTAAGGTATGAATCATGAAAATCTTA
GGCAACTCCACCTTTTTGTTATACTTGAAGCTGTTATAATTTATCGCTTT
AAGGGACTCTTATAGAGAAAAAGGTTGCCATAGTTTTTGTCTGGAGGTAG
TTTGTGGTGTTCTGgtggtgaaaatcaaaatgaacaGGGGGGTTATCAAA
AAAACAACATATCATCTGACTTCGTgtataatttttctttgatttgccGA
TGGACGCCAGAAAACCCACAGATTTTTTGCCAGTGATGGTTCTGCATTTT
CTAGtttcgttttgttttgttttgtttttcgtttggtattttttataagg
CTCTCTTAAAAAGCCGATCACTCCCTGTTGTATTTTCTCAAGGTAAAGTA
GAAAAATGTGGATGAAATTGCGAAGGGCTAAGGCTTAGATTTCGGTGAAT
GGTTTAACAGGGATACTCTCAAacccaaaaaattcaaagaactCTGCAGT
ATCTATTGAAGTTTTTTATTCAGAAATTCTAATGATACTGGACCCCCTAA
CATCGTGTGTACAGTATTACCAGGAGAAACtgattaaagatttttaaatt
tcgacCTCAACCTAGTTTTATTATCAAATTCTCGAAAAGTAATTTTAGAT
TTTAGGTTGATTTTTAgctagaaaaattttatttagctatatatcttaaa
aaccaaagaaattttaaacgcatgtagagtatataaaaaacaaaagatag
tTTATAAATCTACTTCTTATTTTGAACTTATAAAATATCGAATTTATAGT
ATTAGAGCTCGAGCTAGAGGATTAAACTTATTTTGTATTACCGCTCAATT
TCTATTGGTACATAAATTCTGACCTTTGCCTGTAGTTTGAGTGAAAGCAA
ATACATCATATTAATGAAATCCAAA Run BLAST on NCBI transcript from alignment at sc0000279:167193..168267 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017956 ID=TCONS_00017956|Name=TCONS_00017956|organism=Clytia hemisphaerica|type=transcript|length=1075bp|location=Sequence derived from alignment at sc0000279:167193..168267 (Clytia hemisphaerica)
TTTGGATTTCATTAATATGATGTATTTGCTTTCACTCAAACTACAGGCAA
AGGTCAGAATTTATGTACCAATAGAAATTGAGCGGTAATACAAAATAAGT
TTAATCCTCTAGCTCGAGCTCTAATACTATAAATTCGATATTTTATAAGT
TCAAAATAAGAAGTAGATTTATAAactatcttttgttttttatatactct
acatgcgtttaaaatttctttggtttttaagatatatagctaaataaaat
ttttctagcTAAAAATCAACCTAAAATCTAAAATTACTTTTCGAGAATTT
GATAATAAAACTAGGTTGAGgtcgaaatttaaaaatctttaatcaGTTTC
TCCTGGTAATACTGTACACACGATGTTAGGGGGTCCAGTATCATTAGAAT
TTCTGAATAAAAAACTTCAATAGATACTGCAGagttctttgaattttttg
ggtTTGAGAGTATCCCTGTTAAACCATTCACCGAAATCTAAGCCTTAGCC
CTTCGCAATTTCATCCACATTTTTCTACTTTACCTTGAGAAAATACAACA
GGGAGTGATCGGCTTTTTAAGAGAGccttataaaaaataccaaacgaaaa
acaaaacaaaacaaaacgaaaCTAGAAAATGCAGAACCATCACTGGCAAA
AAATCTGTGGGTTTTCTGGCGTCCATCggcaaatcaaagaaaaattatac
ACGAAGTCAGATGATATGTTGTTTTTTTGATAACCCCCCtgttcattttg
attttcaccacCAGAACACCACAAACTACCTCCAGACAAAAACTATGGCA
ACCTTTTTCTCTATAAGAGTCCCTTAAAGCGATAAATTATAACAGCTTCA
AGTATAACAAAAAGGTGGAGTTGCCTAAGATTTTCATGATTCATACCTTA
AACAAATTTTCTTGAAGGGATCTAAAACTATGAAAAAGAACCTGTTAAAT
AGTTTATCTAATCTAAGCAATTAAAACTAAGAAATACTAAAAagatatat
tatattatatttaaattatactctaggggctgagttaggtctcgtatgca
catcggcgtatagtcattgtttctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017956-exon-sc0000279-1491911889:167193..168267 | TCONS_00017956-exon-sc0000279-1491911889:167193..168267 | Clytia hemisphaerica | exon |
| TCONS_00017956-exon-sc0000279-1510915933:167193..168267 | TCONS_00017956-exon-sc0000279-1510915933:167193..168267 | Clytia hemisphaerica | exon |
| TCONS_00017956-exon-sc0000279-1575043694:167193..168267 | TCONS_00017956-exon-sc0000279-1575043694:167193..168267 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279 | supercontig | sc0000279:167193..168267 . |
Blast
The following BLAST results are available for this feature:
|
