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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017744 ID=TCONS_00017744|Name=TCONS_00017744|organism=Clytia hemisphaerica|type=transcript|length=346bp
TGGGTGACAGAGGAGGATTCTCGTGTGACGGCTGCAACAAAGATGGCAGC
ATTGTCATGGCCGCTCCATCAACACCTCGTCACCGCATATTACAATATGA
ATCAACTCTCAAACACCAACAACACATTGCAAGATCAAAGTGAATTCAGC
AATCAtgctaaatatttcaaaacaaaatttgttgagAGTACGTCAGACTA
TGATCCGTTCAGACTGACCTATCCCAGCCGTTGAGAAGCTGGCATTGCCC
AGGCTgttcatatttttttgttttatttgtcaaagctgtatatttttaaa
aaatctattcTTTTATGATGTAAAATATATTTAAGTCGAATCCCAA Run BLAST on NCBI transcript from alignment at sc0000274:170782..171884- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017744 ID=TCONS_00017744|Name=TCONS_00017744|organism=Clytia hemisphaerica|type=transcript|length=1103bp|location=Sequence derived from alignment at sc0000274:170782..171884- (Clytia hemisphaerica)
TGGGTGACAGAGGAGGATTCTCGTGTGACGGCTGCAACAAAGATGGCAGC
ATTGTCATGGCCGCTCCATCAACACCTCGTCACCGCATATTACAATATGA
ATCAACTCTCAAACACCAACAACACATTGCAAGATCAAAGTGAATTCAGC
AATCATGCTAAATATTTCAAAACAAAATTTGTTGAGTTATAGATCTTTTT
TATAGAGTCTATCTTGTCCCATTTCCACCTCAAGGCTTTTTGAAATATGT
TTTATAGCAAGGGTACTTATGATCATTGACTTCCAAGCCCGAAGGGCTAG
ACTCGANAAACGCCAACAACACATTGCAAGATCAAAGTGAATTCAGCAAT
CATGCTAAATATTTCAAAACAAAATTTGTTGAGGTATAGATCTTTTTTAT
AGAGTCCCATTTCCACCTCAAGGCTTTTTGAAATATGTTTTATAGCAAGG
GTACTTATGATCATTGACTTCCAAGCCCGAAGGGCTAGACTCGAGACTCC
TGGATGGGAAATGAAGCCATTTATTAGTAAAATCTATCACTAGATTTCAA
AAAAGCAGTCATCAAAAACAAAAGAACCGCTAGATACAACCCGTCGTCAT
GATTGCGGCGCGTTCTGGATGAGAAATAAGTGGCTTCCATCAGACTAATC
TCCATGCAGATTCTGATACTCCACGCATTGCTCGTATTCAATCTCTAGGC
CATGGCTCCGTAAGCGAATCTGTCCAGGTTGGCGCACCGCTTTGATCAGA
TTTATCCAGATTTGAGCTTATTTTGAACGCGCTTATTGGCTAAAAACAAG
ATAATCACGCAAAAGAGACTTTCGAGGGTGTGGAAAAGGGACCCTTATTG
CTCGCACATACCCGGCCGGCTCCCCTAACCCCTCCCAGGTAATCAACGCG
TGTTCTTTTGCAATAATTGATGATTTTTTATTTCATCTTTCAGAGTACGT
CAGACTATGATCCGTTCAGACTGACCTATCCCAGCCGTTGAGAAGCTGGC
ATTGCCCAGGCTGTTCATATTTTTTTGTTTTATTTGTCAAAGCTGTATAT
TTTTAAAAAATCTATTCTTTTATGATGTAAAATATATTTAAGTCGAATCC
CAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017744-exon-sc0000274-1575043694:171760..171884 | TCONS_00017744-exon-sc0000274-1575043694:171760..171884 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1575043694:171502..171562 | TCONS_00017744-exon-sc0000274-1575043694:171502..171562 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1575043694:170782..170941 | TCONS_00017744-exon-sc0000274-1575043694:170782..170941 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1510915933:171760..171884 | TCONS_00017744-exon-sc0000274-1510915933:171760..171884 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1510915933:171502..171562 | TCONS_00017744-exon-sc0000274-1510915933:171502..171562 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1510915933:170782..170941 | TCONS_00017744-exon-sc0000274-1510915933:170782..170941 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1491911889:171760..171884 | TCONS_00017744-exon-sc0000274-1491911889:171760..171884 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1491911889:171502..171562 | TCONS_00017744-exon-sc0000274-1491911889:171502..171562 | Clytia hemisphaerica | exon |
| TCONS_00017744-exon-sc0000274-1491911889:170782..170941 | TCONS_00017744-exon-sc0000274-1491911889:170782..170941 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000274 | supercontig | sc0000274:170782..171884 - |
Blast
The following BLAST results are available for this feature:
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