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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017644 ID=TCONS_00017644|Name=TCONS_00017644|organism=Clytia hemisphaerica|type=transcript|length=945bp
GACAAGTTTTATTTTGTCTTAACTGGGTTTCTTACTATTCAACCTTGGGT
TCACATGTGAGTGGGACagataattttcttttctttcttgttttctCTTG
CTATAATCCCTGGTGACGTCTAATGACGTCACGATTCAATGGTAATTATA
TTAGCAATGAACATGTGGGAATTTACTTGTTGAGATAtgggttttgtttt
ttgtttttttttttgacacctATTCTCTATACAGCTGTAACATAAATTAG
GTCTGGAGACTTTACAATAAGTAGATTGCTTTTTGGTTTCGACTATCCTG
GGACTTGGTTCCCTTTCTTTCCCTGAAACATACCCCACAGAGATACAATG
CTTAGATTAAAAGTTATATGTCACTATCCTCAAATAATCTTATTATATAT
TTAGCAGATCCCTTGCANGCCCCGAAACATACCCCAAAGAGATACAGTGC
TTAGATTAAAAGTTCTATGTCACCATTCTCAAATAATCCTATTATATACT
TAGCAGATCTCTTGCTTTAATAAATGTTCAAACAATTTACCCTCAGATCT
CGATTCAGACCACCCTGCCTTGCTCATAtggctgtcctccttacagtcct
TCGACAGGCCGTCATCCCTACGGTCTTAGGCAACTAAGTCCAACCATCCT
CATTACAATTTAGACTAAAATCAATCATCCCTATCAGGACATGGGCTCAG
GTTATTCTCACCAGGATATAGGCTCAGGCCATCTTCATCAAATACATGGG
CTCAGGCTTTTCTCATTATGACCTATAGGGAAAACTTTAAAGCACTAAGA
CCAAGACCGTTATCCTTTTAGTAAGAGTTAGGTTCCTAATGTATAATGAC
TTCTTTTTGAGTTTGGCTGCTGATTTGGGGATGTATTGTGCGGGTAGTTT
TGGGGACGTTTTGGGGGTGTGGGTCCCTTCGGAACCCCATACTCC Run BLAST on NCBI transcript from alignment at sc0000271:84119..85063 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017644 ID=TCONS_00017644|Name=TCONS_00017644|organism=Clytia hemisphaerica|type=transcript|length=945bp|location=Sequence derived from alignment at sc0000271:84119..85063 (Clytia hemisphaerica)
GGAGTATGGGGTTCCGAAGGGACCCACACCCCCAAAACGTCCCCAAAACT
ACCCGCACAATACATCCCCAAATCAGCAGCCAAACTCAAAAAGAAGTCAT
TATACATTAGGAACCTAACTCTTACTAAAAGGATAACGGTCTTGGTCTTA
GTGCTTTAAAGTTTTCCCTATAGGTCATAATGAGAAAAGCCTGAGCCCAT
GTATTTGATGAAGATGGCCTGAGCCTATATCCTGGTGAGAATAACCTGAG
CCCATGTCCTGATAGGGATGATTGATTTTAGTCTAAATTGTAATGAGGAT
GGTTGGACTTAGTTGCCTAAGACCGTAGGGATGACGGCCTGTCGAaggac
tgtaaggaggacagccaTATGAGCAAGGCAGGGTGGTCTGAATCGAGATC
TGAGGGTAAATTGTTTGAACATTTATTAAAGCAAGAGATCTGCTAAGTAT
ATAATAGGATTATTTGAGAATGGTGACATAGAACTTTTAATCTAAGCACT
GTATCTCTTTGGGGTATGTTTCGGGGCNTGCAAGGGATCTGCTAAATATA
TAATAAGATTATTTGAGGATAGTGACATATAACTTTTAATCTAAGCATTG
TATCTCTGTGGGGTATGTTTCAGGGAAAGAAAGGGAACCAAGTCCCAGGA
TAGTCGAAACCAAAAAGCAATCTACTTATTGTAAAGTCTCCAGACCTAAT
TTATGTTACAGCTGTATAGAGAATaggtgtcaaaaaaaaaaacaaaaaac
aaaacccaTATCTCAACAAGTAAATTCCCACATGTTCATTGCTAATATAA
TTACCATTGAATCGTGACGTCATTAGACGTCACCAGGGATTATAGCAAGa
gaaaacaagaaagaaaagaaaattatctGTCCCACTCACATGTGAACCCA
AGGTTGAATAGTAAGAAACCCAGTTAAGACAAAATAAAACTTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017644-exon-sc0000271-1491911889:84119..85063 | TCONS_00017644-exon-sc0000271-1491911889:84119..85063 | Clytia hemisphaerica | exon |
| TCONS_00017644-exon-sc0000271-1510915933:84119..85063 | TCONS_00017644-exon-sc0000271-1510915933:84119..85063 | Clytia hemisphaerica | exon |
| TCONS_00017644-exon-sc0000271-1575043694:84119..85063 | TCONS_00017644-exon-sc0000271-1575043694:84119..85063 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000271 | supercontig | sc0000271:84119..85063 . |
Blast
The following BLAST results are available for this feature:
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