TCONS_00017547 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017547
Unique NameTCONS_00017547
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length859

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017547 ID=TCONS_00017547|Name=TCONS_00017547|organism=Clytia hemisphaerica|type=transcript|length=859bp
ttttcaggagaaaaaaaaacatagaagaatattttgtaaaataagaaaaa
acaactTGAAGAAAATTCGATTGAGGCTTGGAGAGATTTTAATAGTTTTC
ATTAACGAAGAAATGAAGGGATAAATATTTTCAGTACTTTGGCTTGAAAT
TTTTTACACCATGGCGGTGACCATCACAACGGACTATGGGGATATGAAAA
TCGAATTATTTTGTGAGGATACTCCAAAAACATGTGAAAACTTTTTGGCG
TTATGTGCAAGTGGATATTATAATGGTTGCTCCTTTCACAGaaacATTAA
AGGCTTCATGGTCCAGACAGGTGATCCTTCAGGCAAAGGTGGAAAGAGCA
TTTGGGGAggaaaatttgaagatgaaatTGTGCCTCATTTAAAGCACAAC
GCACGTGGCATCCTTTCGATGGCAAACAGTGGTCCAAACACCAATGcaag
tcagtttttttttacGTATGCCAAGCAACCGCACCTTGATATGAAGTATA
CTATCTTTGGCAAAGTGATCGATGGTTTTGACGTTTTGGACGATTTGGAG
AAATTGCCGGTAAACGAAAAGAACTTTCGTCCTCATGATAAAGTTTACAT
CAATAATGTCAACATTCATGCAAATCCACTGGCTGATTGATTGTACTCAA
CGCTGGTTTGGGTTTATAAAAGGATATTTTTAACTGTAAAATCATTTAGG
CCCTTTTTATTTATACAGAAACAACAGAAACCCTGTCATTTAAATTCCTT
TTTTCTGATCCTTCTAATGCCAAAAATAccaattatatatattttaagaG
TACATAATTGCTGACAACCAAGGAACGATGTCAGTCTGCACTGTAAAGTC
tattttttt
Run BLAST on NCBI

transcript from alignment at sc0000269:315178..323872-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017547 ID=TCONS_00017547|Name=TCONS_00017547|organism=Clytia hemisphaerica|type=transcript|length=8695bp|location=Sequence derived from alignment at sc0000269:315178..323872- (Clytia hemisphaerica)
TTTTCAGGAGAAAAAAAAACATAGAAGAATATTTTGTAAAATAAGAAAAA
ACAACTTGAAGAAAATTCGATTGAGGCTTGGAGAGATTTTAATAGTTTTC
ATTAACGAAGAAATGAAGGGATAAATATTTTCAGTACTTTGGCTTGAAAT
TTTTTACACCATGGTACGTATATCGCTTTCATTCCTCCCCTAAACCTCTA
CACAAACAACCTAAAATCAAGAATTTGTCGAGCTACTTAAAAGGTCTGGG
ACTGAACTTAATTCAAAACAACTCATTAGAAGTTTTTCGTCGCGCCTTTG
TCTGTTGGATTTTAGTTTATTTCCTAAAGTAGATTCTAAGATTTTAACAT
TGTCCTGAATTAAAAAAATGAAGAAGATATCCAATAAACTTTATGTCTCT
CTTTTAGGCGGTGACCATCACAACGGACTATGGGGATATGAAAATCGAAT
TATTTTGTGAGGATACTCCAAAAACATGTGAAGTATGTAATCTCAAATTT
TATGGAATTTTTAACTGATCCATTTTATTTTATCTTGAAAAGTTTGAAAT
CAGTTTATTAATTGTATCAAAGTTATTCGCTTTTAAGTCTGCACTAATTC
TTGTTTTACTTGCCATTCTCCAACCGGTGCAAATCTAACCAATAGACCTT
ATCGGAGTTTTAAATTTTTCTAAAAAGGCAATGCATTGTGGGGTTGTTTC
GGGAGTATTACAACAGAAATTTCTTAGGAATTCCTCGAGGGAATTCCATT
GTTATACTCCCGAAACAATCCCACAATGCGTCGCTTTATTAGAAAAATCA
AAAACTCCGATAAGGTCTATTGTATACCGCTGTTGAAAAGATGATGCGAT
ATTTTAATTTTCAAAAGAAATTTTTCCCTAGAAATTATAGTGCTCTGAAT
TATCTTTTCAACGGTATACTCAATAATAACAATGAAGCATTCGTTGAAAT
GTGGCGAACAAAACAAAGGATTAGTTTGCACTTGAAGCAAATGGATATTT
AAATTGTATTATGTTTGAAAAAAAATCATGAATGAATGAATTTTGGGTGA
GAGTCAAATTACTCTTTTATTTTCAGAACTTTTTGGCGTTATGTGCAAGT
GGATATTATAATGGTTGCTCCTTTCACAGGTAGGCGCTCTTTCATCTCTT
GTGTTTTCAAGGGAGCGTGTAAATCTCAGAATCCCTACTGATCGACATGG
ATGGTAATTTCCCTGGATCTCCTTCCTCTCGGCACTTATTACACAGATCA
CGCGCTTTTTTTATAATAATACTTTATAAGAATGTCCATGATGAAAATGG
CCAAAAAAATTAAGAATAATACTAAGAATATCACCATCATGGAATTTTGC
TACTCAAGCTAAGAATGTCATTTTTAGAGCATTTTCAATTATAAATTGTC
AATTATCCCAAAGTAAGGCTCGCTCCTTTCACAAAAATGCCATTTTATGC
TTGAGACGTATGTACTAAATGTTGAATCTAGTCTGAATTAGGATCCTAAC
TTAAGAATAAGAATGCTGTAAGAATATTTTAGGATGATTTTCCCAAAAAA
GTTAAGAATATCCATGATGAAATGGATGAATATCCATGATGAAATGGATA
TACACCATTCTTATATAAAAAAAGCGTGTAATTAAAAATTAAGTACGCGT
CTAGGTTTCTGATCATTATCCAACATAGAGATCTAATTTGACAGTCAACA
TTCGTTTTTTGATTAATGTTGTCAAGAAAAGGTCCTGCGGAGAAGTGTGT
CTCTTGAGTGTGTAATTGAATCAAACAAAGTGAAACATGAGACTGTATTT
TGTTTGAAGTCTTTCGGTGGTATTTGCATGCTCTTTGAATTAAGAAGCTA
CAACGAAACTGAAACGAGACAAGGCCTTTGGAAGAGTTTTTCTTTCTCTT
AATACATTGAGTCTTACAAACTCAAAACCATTTGAAAATGAGCAACGAAG
ACTCGGATCGGAGAATCGAAGGTTCAGGAGCTCATACAACTTCTGAACAG
ACAGATTTGCTGAAGAGAATTCAACAGTTAGAAAGAAAACATAAAGAGTT
GGAAAAAAGGCTAGAACATCTACCTTGGTTGGAGAGATTTCTCAATTATT
TGAATTGGTTCAAATTTTGGCAGCCTCGTAATGGAATGATCAGCATGGAA
ATGAGGCTGAAAGAAGGCGTTCAAAGGTTCATCGAGTTTCAACATTACGA
CAACAAGAAACGAATCTATGACAATTATGCGGAATATTATGAAGATATTT
CAAGTCGGATGATGTCGAATAAATATTACTATTCCGGGATCTATTGGTTC
AAAAAAGAGGCATTTAATACAAAACAGAAAAACGCTGAAATTGAAAGTGA
GTGGCTTGAAAAAAGACAAATGAATGGAGTGTTTCTTGGGAAATTATTTT
GGAAGATAATAAACTTGATTGAGGATCACAAGATATATGTACTGTTGCAC
CCGACGGACAGAAGAAAATACCTTGAATTAAAGCGAGTTGAAAACATCCA
TAATCAACAAGGAGATGAGAAACACTTGTGGAAGCTCGATTGTGTGAACG
AGGAATATTGCATTGAAAGTGGACACGATGTCCAACAGAAATATACGAGA
ATAATGTACTGCACGTGGAAGTTTCGATGGTTTAGTCAGCAAGGTGTATC
GTTGATTTTGTTGGCGTTTATCTTCCTCTTCCTCTTCGTCGTTTACATTT
ACGGTCATTAATTATTTCTTAAACTTCAGTTAGCAAAAGAAAATTTGTCC
TTTAAATTTCTATTATTTAGATAATTTTAAGACGAATTGTTTCCTTTGTT
TCCTACATAACAGTCTTAATTTTAAAAATACAAATTCATGACACTAAGTC
AATTTTTTTCAATTTTGTCGTCCAGGATCCTGACCAGTGGAGTATTTTTA
TTATTTGCACATTCCGAATGAACCCATTCGCCAATTTTGGGGGAATTTGT
TTTGGCGATTTAATAAAATTTTTAAATTTAGCGAGAATTAATTTTGGCGA
ACGATCCATTTTTTATTTTTAGTATTTAAGCTTAAAAAGGATGGAAAAAG
GGGTTTTTAGGATAAATAGAGACTATGTGAAAGAAATTTAATTTTGGCGG
GAAGAAATTTTGGCGAATTTTTGAGGCAGTTCGCCAAATTTGCCGAAATT
TCTTTCCGCCGTAATAATGATGATAATTCAATCAAAAACGAAAGAACTTG
ATCAATTGTCGCTGTTTACACTACTAAAAAGTGACTGTCTTTTAGTTTAG
TACGTCATACAGGCAAAAGACCTATGCGGACAAGAGCATTTGATACCAAT
AAGAAGGAAACTTGATACCATACTTCGATTTTCCAGTGATTTAAATTCTT
AAGAGAAGTCGAGAGAGCCAAAATTCGAAAACGAAACAAGACTCTACTAG
ACACAACTTCGTTTTTGGAGTATATGTAAATCCAATTCTGCATTGACAAT
TCTTAAACGATCCAGAAAAATGAGCAACAACAATTTTGATCGAAGAATTG
AGGGGCGTGTTGCACTCAAAGAAGCAAATACAACTGAACACTTACGCAAA
GATGTTGATGGTTTACAAAAAAAGATTATTTTGCTGGGGAGAAAACATAA
AGAGTTGGAAAAAAGGCTAGAACAGCTACCTTGGTTGGAGAGATTTCTCA
ATTATTTAAATGGGTTCAAATTTTGGCAGCCTCGTAATGGAATGGTCACC
ATGGAAATGAGGCTGAAAGAAGGCGTTCAAAGGTTCATCGAGTTTCAACA
TTACGACAACAAGAAACGAATCTACGACAATTATGCGGAATATTACAAAG
ATATTTCAAGTCGGATGTTACTCAATAAGGAATACCAATCAGGATTCTAC
TGGTTTTTTAAGGAGGAATTCGATACAACAAAACAAAATGCTGAAATTAC
CACTGAGTACGAGAAATGTGACATGAATGAGTCATTTTTCGGGAAAATCC
ACTGGAAGCTGATCAACCTTTTCGAAGATCACGTGTCTTGTATTGTACTG
CATTCTTCTGATGAAACAAAGTTTCTGGAATATGCGCGTGTTAAGAACAG
AAACTTCGGACGTCGCGAAGAACATATTTGGAAAATTGATGGGTTGACAA
AAGATTTTTATCTGGAACATCAGAACACTGACGAAAAGAAGTACACTAGA
ATAAGTTATAGTAAATGGAAGTTTCGATTGTTTAGTCAGCAAGGTGTATC
GTTGATTTTGTTGGCGTTTATCTTCCTCTTCGTCGTTTACTTTTTGAGAA
GAATGTGGGGCTTTTTCTTTTGGTGAAAATAATCCGTTTGGCGTCCACTC
AGATAGTGGTTATGATTGCTAACTCACACGAGTTTTCTTGTTTCAATTGG
AAATAAAAATTTATATGACGCAACTTTTTTTTGAATAAATTTGTAACATG
AAGAAATTATCTTCTTATTTTCTGGAAATAAATTTATATGATAAAGACAA
AGAAAAAAATGAAGGCCCTTGAATCAAAAGTTTCGAAGGGGAAGAAGTAA
TTCTTTGGGATTCGAAATGAAGAAACTTTTACTCCATTCCAAATGTGCTT
AGAAAACTATTCATACATAAGAAGTAGTCTCACGTTGTGTAGTTTTCACG
GTGCTAAAAAGGGTGGTACAAACTAGCACGGGGTCCACTTGAAGCTTTTT
GATAGATACAGTCCGCCAGATTTTCGTTGTTTTTGCTAGATAAAAAAAAT
AATGAAGCAATGTTTTTATTTGAAAATAGGGGATTCAAAACCTGTTATTG
ATGTTTATTTCTCATTCTTAATTATATTTTTCAACTTCAAGTAGCTTTTT
TGTTATTTGGATTTTAAACATTTTTTTAAAAATGGCAACCTCGTCAAATG
CTTCTATAGTCTACTTCACTGGACTCAGCGTCATCAAAAATTATCTAAAA
GCAAGTTCAGCCAGAAGTTGGCTCTAGTCTAGGTACAAATCTGCTTTTCA
TCCACGAATCCACCTCAAAAACTGTCAACACTGGCAAAATTGTTGTTTGA
TACCTTAACAAGTATTAAGATTTTCCATTCATTTTTTGTTTTCAGAAACA
TTAAAGGCTTCATGGTCCAGACAGGTGATCCTTCAGGTTTGTTGTTGTTG
CTAATCACCACTTGTAATACGTAGTAATGTTGTTAAGAGAGTAACTAAAT
CCAAAGCTGCAAGGTTCGAGAACATTTTTGAAGAGCCTTTGAATTTTTAG
GATAGATTTAAAGTACTCAATTTATTAAAATGTTACTGCCTGCCAACCAA
CATTTTCGAAATTTGAATTTTATAACCATTCTCGCCCTACAATTAAAAAA
GTTACGAGGTTTGCATGCTCATAATCTCATACATCGTGTATTTTTGATGA
GCTCTTTTGTCCATTGGTGAAATCTTATTGCCTCGTTTAGGTGTTAGAAA
TTGAATCAAATGAGATTCATTGTTACTGACATAGGTGTAGGAAAATATTT
GGACTAAAAAAGGCCTGTAAACTCATGTAAACCTTTCAATCTTTCATCAA
ACACAAAATGATCAATGCTTTCTTCAAAGTGGACTCTATTGCTTGATACT
TTCCTCCAAAGTTTACCAGCAAATTTTTGTCTAACAGTTGAGTCTGAAAT
CGCATGTGTTTATAAAGAACTTTCCATTTTCTGACTAAGTTTTATTTAAT
TTCGCCTAATTTCGTATATTAGAAGGCTAGAAATATCTACAATTCCGATA
GTTAGAATGTTCAGAGTAAACTTGAGTTCTAATAAAAAGTTTTATTTCGA
CGGACGAGCCTCCGAATTTCTTTTGATACATTTAATTAAAAAAATCCAAA
GACTTCAACGACCAATTACCGACAAATTCTACTCCTGTTTTTCCTCATAC
CTCCATGTTTTCAGGATCAGGCAAAGGTGGAAAGAGCATTTGGGGAGGAA
AATTTGAAGATGAAATTGTGCCTCATTTAAAGGTAAACATTATTTGGTTT
ACATATACACCGTTTTTTATATCAATTTCATTTTGTTGCTTACAGCACCT
AACCCCGAGAATGTAGGTGAAATTTGAATCAAACCTGAAAGATGTAGATT
TGCATTTAAAAAAACATTTAATGTTTTCAACGAAACTTTGAACACTGAAT
TATTTTAAAATTTCTACTAAAGTCCCAATGGAAATAGAAATTCTATTGTT
CAAAAGCTAAGCAAATTTTCTGATTGTGCTTGGGTGCCAGCGGGTCTGTG
ACTCGTCGTAAAAGCTCAAAATGTCAACATCAATCATCTCTCGTTACATT
TACATAATTTGACAAACTTTTTTATGTCGGGTTATGAAGACCCTAAAATT
GAAGGTCAGCTAAGGGGCCGTCCACATAGTACGTACGCACTAAGGGGGGA
GTCTTCTCAAAAGCGTATGCTTGCGTACGGGGGGAGGGGAGGGGTCAAAG
GGAAATGTACGTACGCAGAGAAAATTTTTTCATTTGCTTGTTTTTTACGC
TTCTTATACGCATCAAGGAAAAGAAAAAGTTTCTTAATAAACATTGAGTT
TCATGTATGAGATAAAGGTCCGAACCAAACGATTTGAATTCGAAATTTTC
TTCAACCGAGGGGGGTGTGGATGAAAGTACGTACTTACCAGGGGGTATAA
CCATTTGCGTACGCTTGCGTACAGGGGGGAGGGGGTATCCGATTTTCGAC
ATTTTAGTGCGTACGTACTATGTGGACGGCCCCTAACCCCAAAAAGTAGG
TCGAACATTTTCGTCAAAATATCTAACTTAGAACAATAAATTTTGAAATG
GACTATTTTTTGCCCATTTCCTTTGTTCATTAATAGTAAGAAAATGCCCT
ATCATCACAACTTAGTTCCAATAGATTGCGATTCAGAGAGGATTTATTTT
AGAAATGTCTCATATCTAAAAATTAATTTAAGCTCAAATTGATGAGTAAT
ATGTAACAGTATTCTCTGAAACAACTTTCTATGAAGTTGAACTATCGTTA
GGGCTACAATGTTAAAAGATGAGAAACCTACATTCTCGAGGTTTACTACA
TTCTCGGGGCCAGGTGCTGTATGTTTCTTTTCTTCTCAACCTAAAATATT
TTTTGTTAGTATGTAGAAAGGAGGCGCCCCTCTATGCTCTCCAAAAAGCA
GAGCGCGGCGCTACAAAGGGAGAAGACTTATTTCTTTCTTTTGTTTAAAA
ATATTGTGCAAGCAAATAGTAGGATGTCCTTCAAGTGCATAGATCAGCAG
GATACTTTAACTTGGTTTAATATCGACATCACTCTTCTAATCCAGACACC
CTTCTTTAGAGATAGGAATAGTAGAAAGGTCGAAATCGCTTATGTAAACT
ATATTTCTTTGCTTAGCGACCAGAGAGGAAAATAATATTTTGTCTTATCA
GTGATTCTGCCCTTACTATTATTCCTATCTCTAAAACTAGGTGTCAGGGT
ACTAAAAAAGCTTTTATTGCAAAAAGAACGTCCAGCTAACGTTGATTGAA
CGTTATTTGTCAGCTGTTGTAATTCAAATAATCCTTTGATTCTAGCACAA
CGCACGTGGCATCCTTTCGATGGCAAACAGTGGTCCAAACACCAATGCAA
GTCAGTTTTTTTTTACGTATGCCAAGCAACCGCACCTTGATATGAAGTAT
ACTATCTTTGGCAAGTAAGAACCAACTATATCCTTAGTCCTAAAGAAAAC
TTTTTCCATATTGAAATATTTTAAAAGTATTATCGTCACTCGTATTAACC
ACACCTCTTCTCACAGACCCGCTAGGATTTTTTTAGCCAGTGGGAGTAAA
AACAACGGACCAAAAATCGATGGGGATTGATATTCCTATTTTTTTATGGC
TCGGGATTTGAAATCCATTGTTTTCGAGCCAGAAATTTCAGTGGGGGTAG
AAAAAATAGCACAATATTTTGTACTCAGGATTTGCTTATCTAATTATTTT
TAGCGGGGACAAAAATTAGAGAATAATTTTCCACTGAGCGATATTTTGGC
CAATATTTTCAGTGGAAAGGGGTCCCAGTGGGTCTGCGAGAAGGGGGTAT
CGTCAACGAGAAATTCAATCCTTACCACAGAGCTATTTAAATCAAAACTC
AATGAATCAGAAAGTAAAATCTTTCAAAAACCAATGTAAGATCAAAATGA
GAAAAAGGAATTCCTTTCGTTGTAGAGTAGTTGAAAGTGAAATGAATGGT
CTTACAGGTCTTACAGCTTTCTTGGAACCTAAAATCTAGGCTACCCTTCC
TGATGACATTAAAGAACTTAAAAACTACTGGGACTTAGTTCTCTATGTAT
TCTTTTCAAGGGTTAAAAAGTTAATCGAGTGAAAAATTTAATGATGTATA
TCCAAGATGTCGAAGAAGTTAATTCAGATCTTATTTCCTTTCTTTCCAGA
GTGATCGATGGTTTTGACGTTTTGGACGATTTGGAGAAATTGCCGGTAAA
CGAAAAGAACTTTCGTCCTCATGATAAAGTTTACATCAATAATGTCAACA
TTCATGCAAATCCACTGGCTGATTGATTGTACTCAACGCTGGTTTGGGTT
TATAAAAGGATATTTTTAACTGTAAAATCATTTAGGCCCTTTTTATTTAT
ACAGAAACAACAGAAACCCTGTCATTTAAATTCCTTTTTTCTGATCCTTC
TAATGCCAAAAATACCAATTATATATATTTTAAGAGTACATAATTGCTGA
CAACCAAGGAACGATGTCAGTCTGCACTGTAAAGTCTATTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009806XLOC_009806Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017547-exon-sc0000269-1575043694:323710..323872TCONS_00017547-exon-sc0000269-1575043694:323710..323872Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1575043694:323391..323465TCONS_00017547-exon-sc0000269-1575043694:323391..323465Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1575043694:322744..322796TCONS_00017547-exon-sc0000269-1575043694:322744..322796Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1575043694:318787..318827TCONS_00017547-exon-sc0000269-1575043694:318787..318827Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1575043694:317941..318002TCONS_00017547-exon-sc0000269-1575043694:317941..318002Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1575043694:316259..316377TCONS_00017547-exon-sc0000269-1575043694:316259..316377Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1575043694:315178..315523TCONS_00017547-exon-sc0000269-1575043694:315178..315523Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:323710..323872TCONS_00017547-exon-sc0000269-1510915933:323710..323872Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:323391..323465TCONS_00017547-exon-sc0000269-1510915933:323391..323465Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:322744..322796TCONS_00017547-exon-sc0000269-1510915933:322744..322796Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:318787..318827TCONS_00017547-exon-sc0000269-1510915933:318787..318827Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:317941..318002TCONS_00017547-exon-sc0000269-1510915933:317941..318002Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:316259..316377TCONS_00017547-exon-sc0000269-1510915933:316259..316377Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1510915933:315178..315523TCONS_00017547-exon-sc0000269-1510915933:315178..315523Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:323710..323872TCONS_00017547-exon-sc0000269-1491911889:323710..323872Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:323391..323465TCONS_00017547-exon-sc0000269-1491911889:323391..323465Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:322744..322796TCONS_00017547-exon-sc0000269-1491911889:322744..322796Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:318787..318827TCONS_00017547-exon-sc0000269-1491911889:318787..318827Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:317941..318002TCONS_00017547-exon-sc0000269-1491911889:317941..318002Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:316259..316377TCONS_00017547-exon-sc0000269-1491911889:316259..316377Clytia hemisphaericaexon
TCONS_00017547-exon-sc0000269-1491911889:315178..315523TCONS_00017547-exon-sc0000269-1491911889:315178..315523Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:315178..323872 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.8281	74.6206	82.7474	84.8872	0	0	1.09233	1.80812	0	0	0	0.763651	0.609749	0	50.3627	43.3667	45.1119	47.9603	30.4006	34.7276	32.1902	30.5023	38.1734	31.0082	1.37702	0.904476	40.8624	24.8392	23.6861	21.8466
Blast
[Close]
BLAST of TCONS_00017547 vs. Swiss-Prot (Human)
Match: PPIL3 (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 2.321e-76
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:  161 MAVTITTDYGDMKIELFCEDTPKTCENFLALCASGYYNGCSFHRNIKGFMVQTGDPXXXXXX--XXXXXXFEDEIVPHLKHNARGILSMANSGPNTNASQFFFTYAKQPHLDMKYTIFGKVIDGFDVLDDLEKLPVNEKNFRPHDKVYINNVNIHANPLA 634
            M+VT+ TD GD+KIE+FCE TPKTCENFLALCAS YYNGC FHRNIKGFMVQTGDP+G G    SIWG KFEDE   +LKHN RG++SMAN+GPNTN SQFF TY KQPHLDMKYT+FGKVIDG + LD+LEKLPVNEK +RP + V+I ++ IHANP A
Sbjct:    1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160
The following BLAST results are available for this feature:
BLAST of TCONS_00017547 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIL32.321e-7673.13Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
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