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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017403 ID=TCONS_00017403|Name=TCONS_00017403|organism=Clytia hemisphaerica|type=transcript|length=1100bp
ATTCGCTCCCCCTGCCACCACACCACAGGTCGAAATATGAATGTGGatct
aaaaaaacaacatgGAAGGAGTGTTTACTTTTCTATATAAGGATGTATGA
ATAATACTTCTATGCACTATAAAAAAGAGGCAAAGCATTGgtgaaatatc
ttcaaaaacTGTTCACCTGCGATAAACCCACTACAACCCTTTTAAAAAGC
AcggaaaatatattcaaaaatgaAGTTATCAACTACAGGGATTATCTTTA
TTGTTCTAATTTTTACCTGTATGGAAGTGACCCATGCCGGTACTTCGTAT
CAGATCTATGACGGTCACAAACTTGGATTCGGATGTCATAAAGGGTATTG
TTGGTCTTATTGTGGTGATTCATACGTTGACGGAAAATGGTGTTACACCA
GAGAAAAAGGTTTCCATGAGGGTAAAATGTCATGCTCAAGTGACTGGAGT
TGCTCTAATAAAGTTTTCAAATGTGTAGGTGCTTGTGGAAACTGAGTTAT
CTGGAATCAATCTGTTCTGCTACTTTCCATTAATGTGGTTATCGTAATAT
CTaatcaaaattttgttattttgtaatttagaattgtttattatatttct
taatatttttgcttatttcCTTATGATTCAGTATCTTGAACTTTTTAGGC
TCAGTGAGCTTTTTTTGGAATGGAGAAAGTATTATAGTCTATATATGCCc
tcccagcggtttgcgtgaatgcgtgaatgggctttttcacttgcgcgaat
gcgtgaattagaaagctttgcgtgaatgcgtgaatttgggaaaaaaattg
caTTATTGCGTGAATCGAAGGTCTGCTGGGGGTCTCATATTTACAGGGAC
GGAATAGTTGCCTCTAAGCTTTATTGGTTTATAATTTTGAGAACTTTGAT
TTTCTATATCTTATTATGAATTTCTACCTTAACCATACTCTCTTACCTTC
TGAGATTATTTGAGCAGCTGTAGATGATCAAAAAAGTATGCTCTGAAGGG
TATTCCTAGCGAGAGTTAAATGCTAGTTTAATCATAATTTATCATTCAAT
TTGTAATAATTGTAATAATTGTTAGagggaaaaaatatgaaaaaaacaac Run BLAST on NCBI transcript from alignment at sc0000267:11488..13008+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017403 ID=TCONS_00017403|Name=TCONS_00017403|organism=Clytia hemisphaerica|type=transcript|length=1521bp|location=Sequence derived from alignment at sc0000267:11488..13008+ (Clytia hemisphaerica)
ATTCGCTCCCCCTGCCACCACACCACAGGTCGAAATATGAATGTGGatct
aaaaaaacaacatgGAAGGAGTGTTTACTTTTCTATATAAGGATGTATGA
ATAATACTTCTATGCACTATAAAAAAGAGGCAAAGCATTGgtgaaatatc
ttcaaaaacTGTTCACCTGCGATAAACCCACTACAACCCTTTTAAAAAGC
AcggaaaatatattcaaaaatgaAGTTATCAACTACAGGGATTATCTTTA
TTGTTCTAATTTTTACCTGTATGGAAGTGACCCATGCCGGTACTTCGTAT
CAGATCTATGACGGTCACAAACTTGGATTCGGATGTCATAAAGGGTATTG
TTGGTCTTATTGTGGTGATTCATACGTaagttcttttttatttatttatt
catttatttttctttcattcatCAATTAAACCACcatacagtatttcaaa
atcagccacatttcaatcaaaacaaaacaagatttGGGCTATCAGTTTGA
TTCTGGAAAGGATTGACGGAAGCTTAGTTTTTAATTGAAATCAATAATGT
TTTTCGGCGTCATCCAATCACAACCATGCAattacaattcatgatattca
taacgtaatgttttctacggaaataccccggttttagccagtagtggcaa
atttaaactaaacaaaagtttaaaaagtataaaatttgccactattggca
aaaaccggggtctttctgtagaaaacattacgtcatgaatatcatgaatt
ccatgtcatttatttttattattattttaatcTTCATATTTTTCAGGTTG
ACGGAAAATGGTGTTACACCAGAGAAAAAGGTTTCCATGAGGGTAAAATG
TCATGCTCAAGTGACTGGAGTTGCTCTAATAAAGTTTTCAAATGTGTAGG
TGCTTGTGGAAACTGAGTTATCTGGAATCAATCTGTTCTGCTACTTTCCA
TTAATGTGGTTATCGTAATATCTaatcaaaattttgttattttgtaattt
agaattgtttattatatttcttaatatttttgcttatttcCTTATGATTC
AGTATCTTGAACTTTTTAGGCTCAGTGAGCTTTTTTTGGAATGGAGAAAG
TATTATAGTCTATATATGCCctcccagcggtttgcgtgaatgcgtgaatg
ggctttttcacttgcgcgaatgcgtgaattagaaagctttgcgtgaatgc
gtgaatttgggaaaaaaattgcaTTATTGCGTGAATCGAAGGTCTGCTGG
GGGTCTCATATTTACAGGGACGGAATAGTTGCCTCTAAGCTTTATTGGTT
TATAATTTTGAGAACTTTGATTTTCTATATCTTATTATGAATTTCTACCT
TAACCATACTCTCTTACCTTCTGAGATTATTTGAGCAGCTGTAGATGATC
AAAAAAGTATGCTCTGAAGGGTATTCCTAGCGAGAGTTAAATGCTAGTTT
AATCATAATTTATCATTCAATTTGTAATAATTGTAATAATTGTTAGaggg
aaaaaatatgaaaaaaacaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017403-exon-sc0000267-1491911889:11488..11862 | TCONS_00017403-exon-sc0000267-1491911889:11488..11862 | Clytia hemisphaerica | exon |
| TCONS_00017403-exon-sc0000267-1510915933:11488..11862 | TCONS_00017403-exon-sc0000267-1510915933:11488..11862 | Clytia hemisphaerica | exon |
| TCONS_00017403-exon-sc0000267-1575043694:11488..11862 | TCONS_00017403-exon-sc0000267-1575043694:11488..11862 | Clytia hemisphaerica | exon |
| TCONS_00017403-exon-sc0000267-1491911889:12284..13008 | TCONS_00017403-exon-sc0000267-1491911889:12284..13008 | Clytia hemisphaerica | exon |
| TCONS_00017403-exon-sc0000267-1510915933:12284..13008 | TCONS_00017403-exon-sc0000267-1510915933:12284..13008 | Clytia hemisphaerica | exon |
| TCONS_00017403-exon-sc0000267-1575043694:12284..13008 | TCONS_00017403-exon-sc0000267-1575043694:12284..13008 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000267 | supercontig | sc0000267:11488..13008 + |
Blast
The following BLAST results are available for this feature:
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