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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017369 ID=TCONS_00017369|Name=TCONS_00017369|organism=Clytia hemisphaerica|type=transcript|length=2286bp
GGAGATTTGGTGTACGATTTTTTGTAATGATCGGTAAGagaataatattt
tattttaaaacaataTTGTCAAATAAGACAATTCCATAATGAGTTTTGAC
GTATTACCAAATGAGATATTGAAACTTATTGTATCATTCCTGTCTAAGGA
GGATGCCAAAAAGGTCTCCCTCACTTCAAAAAAAATGTACGATTTGACTT
TGGACAGGATTTGGTACaaaattaaaccaaaatatcatcTCTTTGGTGAT
AAAATAGGGATCAGTGAAGAGATCCGAACTGTTGGTTTTTTCAAGAAACT
TTCGCATCTACCCATACGTGAAATAAGTATATATTATTTCCCGAAATGGT
CATGTAAAAAAGTTCATAAAGCTTTCCCACTTCTCAAACTGTTACATTTT
GACCGATTAGAATCGAGCACGGTGTTAGGATTCAATACCAAATACTTCAG
TCAATTTAAAATGCCCATGGTAATCTATACACATATGCTAGAAGTTAGCA
ATCAAAGTCATTTTGATGAGCTTTTACAAGTGATGAAAACTTGTAACGTT
GTAAAATTTGTTATCAATCATTTTTGTGAATATCGAGATACATATCAGAT
TAGATGGTCGCCTGTTCAACTGGAAACGATCATTAATGCAGTACCAAAGA
TAACAATTTCTTTAGACTGTCTTGCATTAACTCGAAAGAATGcaaaacaa
ttttacaaaagtATTTCAAGAAATAAAAATTGTAAGGTTTATAAAAGAAC
AGCGAAACACTACCGTTATTTATTTTCTGCAAGGGATATTGGATTGATGG
CTAGATATGATATCAAGATCACCAAGCTATATAGCGGCTATCTTAAGATA
CCCTCTGTCGAAAATGACCAGTCGTTGCAAAAGTTTGCTGAAGCGCTCAC
CAAATTAAGTCACCTCAAATCTTTCGAATTCCACTATGAGCATTTACCAA
CTACAATCGACTATTTTACCAATGTTCCAATAACGTCCCTGTCCACTCAC
GCATTTGAAATATCGGGAAAAGATAAGATTGAAAAAGTAGTGCAGACATT
GTCTAAAATGAAGTCTCTTCGTCGTTTTTCTATTGGTTCGAGTGACTATA
AGTTTTTACCCGAGGACTTAGCCATGTTTAAAGGTTTACCCGTGAAATAC
ATTTATTTGGCAGCTTTGGATTTAACGAAGAAGAACATTCCAGATTTTCG
TCGAATTATCATGGAAATGAATGTAGAACACATTGGGCTTTCCCCTTATT
TTTCTGATGGTAGCAGACGTCATAGTAAGATGGAAGAACTTGGCATTGAA
ATGAAAACACACGGGCTTGGTGGTATCTACCAAACCATATAGTACAGTTT
GCCTTTCATTTATGAGCTTAAAACTCATACTGGTGTTCTCCTATTATGAC
TTAAGGTTAGTCGTTGAAAGGTGGAATTGATAAAAGAAGCGAACTCATTT
TTCATTACGATTTTATGtaaaggttggaaattttactCCATTTAATCTCG
TTGTGCCCCTTTTTTGGGAAGGTTCTCCATCTTTCAATAAAATGTTAAAC
AGGGACGGGGCTCTTCAAAATTTGATCTCCTTGGTCTCCTTGGTGGACCT
AGAtacaagaataaacaatgtttttcttttttttttaattgtcattcacc
aatgttttacagaccctcttgataattaaaagtttttaatcgtgaaggAT
AAATACAACAGCAGAATCGTTGGccaagaggaaatccaaatttcacaagt
ttgtaattaaaaaagttaaatttcatatcaaattttaatgtctaggtaca
gagatagaacaaggctttatCAAATGTGCGGTATCCAGCTTCGCTATTAA
ATATCCCTGGTTTGAGTATATAGTATATATTTCCAATCCAATGTTCTTGA
AAATATCAGGTCAGCTTTGGCTTAAACAGAATATATCGCTGATCGAGTTA
TCGATATTTTACCGCCAAATAACTCTCTTGAGACTTATACTTTAATGGGG
ATAAACGTTCGTGgggattcaaaaatttcgcggggacttaatttcgcgtg
tggcactattgggtaggcaatattttcacgattttgtgacttctactttc
aaatcatgcatattggttgttgaaatacacattatttgcgcttctttgat
gcaagtaaccattgaaatagtatttatttgacatattttgagtattGTTT
AGatatatttcgcggatgaggcccttccaaacacccaaatccgcggaatc
cgcgaaattcaatccccgcgaaagtttaccccatta Run BLAST on NCBI transcript from alignment at sc0000266:337489..339774+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017369 ID=TCONS_00017369|Name=TCONS_00017369|organism=Clytia hemisphaerica|type=transcript|length=2286bp|location=Sequence derived from alignment at sc0000266:337489..339774+ (Clytia hemisphaerica)
GGAGATTTGGTGTACGATTTTTTGTAATGATCGGTAAGagaataatattt
tattttaaaacaataTTGTCAAATAAGACAATTCCATAATGAGTTTTGAC
GTATTACCAAATGAGATATTGAAACTTATTGTATCATTCCTGTCTAAGGA
GGATGCCAAAAAGGTCTCCCTCACTTCAAAAAAAATGTACGATTTGACTT
TGGACAGGATTTGGTACaaaattaaaccaaaatatcatcTCTTTGGTGAT
AAAATAGGGATCAGTGAAGAGATCCGAACTGTTGGTTTTTTCAAGAAACT
TTCGCATCTACCCATACGTGAAATAAGTATATATTATTTCCCGAAATGGT
CATGTAAAAAAGTTCATAAAGCTTTCCCACTTCTCAAACTGTTACATTTT
GACCGATTAGAATCGAGCACGGTGTTAGGATTCAATACCAAATACTTCAG
TCAATTTAAAATGCCCATGGTAATCTATACACATATGCTAGAAGTTAGCA
ATCAAAGTCATTTTGATGAGCTTTTACAAGTGATGAAAACTTGTAACGTT
GTAAAATTTGTTATCAATCATTTTTGTGAATATCGAGATACATATCAGAT
TAGATGGTCGCCTGTTCAACTGGAAACGATCATTAATGCAGTACCAAAGA
TAACAATTTCTTTAGACTGTCTTGCATTAACTCGAAAGAATGcaaaacaa
ttttacaaaagtATTTCAAGAAATAAAAATTGTAAGGTTTATAAAAGAAC
AGCGAAACACTACCGTTATTTATTTTCTGCAAGGGATATTGGATTGATGG
CTAGATATGATATCAAGATCACCAAGCTATATAGCGGCTATCTTAAGATA
CCCTCTGTCGAAAATGACCAGTCGTTGCAAAAGTTTGCTGAAGCGCTCAC
CAAATTAAGTCACCTCAAATCTTTCGAATTCCACTATGAGCATTTACCAA
CTACAATCGACTATTTTACCAATGTTCCAATAACGTCCCTGTCCACTCAC
GCATTTGAAATATCGGGAAAAGATAAGATTGAAAAAGTAGTGCAGACATT
GTCTAAAATGAAGTCTCTTCGTCGTTTTTCTATTGGTTCGAGTGACTATA
AGTTTTTACCCGAGGACTTAGCCATGTTTAAAGGTTTACCCGTGAAATAC
ATTTATTTGGCAGCTTTGGATTTAACGAAGAAGAACATTCCAGATTTTCG
TCGAATTATCATGGAAATGAATGTAGAACACATTGGGCTTTCCCCTTATT
TTTCTGATGGTAGCAGACGTCATAGTAAGATGGAAGAACTTGGCATTGAA
ATGAAAACACACGGGCTTGGTGGTATCTACCAAACCATATAGTACAGTTT
GCCTTTCATTTATGAGCTTAAAACTCATACTGGTGTTCTCCTATTATGAC
TTAAGGTTAGTCGTTGAAAGGTGGAATTGATAAAAGAAGCGAACTCATTT
TTCATTACGATTTTATGtaaaggttggaaattttactCCATTTAATCTCG
TTGTGCCCCTTTTTTGGGAAGGTTCTCCATCTTTCAATAAAATGTTAAAC
AGGGACGGGGCTCTTCAAAATTTGATCTCCTTGGTCTCCTTGGTGGACCT
AGAtacaagaataaacaatgtttttcttttttttttaattgtcattcacc
aatgttttacagaccctcttgataattaaaagtttttaatcgtgaaggAT
AAATACAACAGCAGAATCGTTGGccaagaggaaatccaaatttcacaagt
ttgtaattaaaaaagttaaatttcatatcaaattttaatgtctaggtaca
gagatagaacaaggctttatCAAATGTGCGGTATCCAGCTTCGCTATTAA
ATATCCCTGGTTTGAGTATATAGTATATATTTCCAATCCAATGTTCTTGA
AAATATCAGGTCAGCTTTGGCTTAAACAGAATATATCGCTGATCGAGTTA
TCGATATTTTACCGCCAAATAACTCTCTTGAGACTTATACTTTAATGGGG
ATAAACGTTCGTGgggattcaaaaatttcgcggggacttaatttcgcgtg
tggcactattgggtaggcaatattttcacgattttgtgacttctactttc
aaatcatgcatattggttgttgaaatacacattatttgcgcttctttgat
gcaagtaaccattgaaatagtatttatttgacatattttgagtattGTTT
AGatatatttcgcggatgaggcccttccaaacacccaaatccgcggaatc
cgcgaaattcaatccccgcgaaagtttaccccatta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017369-exon-sc0000266-1491911889:337489..339774 | TCONS_00017369-exon-sc0000266-1491911889:337489..339774 | Clytia hemisphaerica | exon |
| TCONS_00017369-exon-sc0000266-1510915933:337489..339774 | TCONS_00017369-exon-sc0000266-1510915933:337489..339774 | Clytia hemisphaerica | exon |
| TCONS_00017369-exon-sc0000266-1575043694:337489..339774 | TCONS_00017369-exon-sc0000266-1575043694:337489..339774 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266 | supercontig | sc0000266:337489..339774 + |
Blast
The following BLAST results are available for this feature:
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