TCONS_00017356 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017356
Unique NameTCONS_00017356
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1878

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017356 ID=TCONS_00017356|Name=TCONS_00017356|organism=Clytia hemisphaerica|type=transcript|length=1878bp
aaatagatacatgtctttcgcctttatgaagaagccttcaccgcAATATG
CCGCATCACAACATTCAACATTCAAGATGTCactataaaatttttgaaaa
aaaagattgaaaagttCTTTTAATCAAACTGAACTGAGCAGCTGTGAGCT
GAGAACTGTTCATATTTTTTCACGTACCCGACCCTACATTTATAATTTAC
TGCCTCTCTTaaaaagaaaacgagaaaaTGCTGTCAAAACGAAGCcatct
tttaaaatcattttgcaGTCACCTTGCAAAACAGTATCAATTTTCTCAGA
GGAGTATTGTCAGTTTTGGAACAGGGGAAGACGTTGCTCTCATCACTGCC
CCGTTTTCTGGTGGACAGcctAGAGCCGGAGTGGAACATGGTCCAAAAGC
TCTGCGAAATTCTGGTTTGGTTGACTGTATAGAGGCATTagGAAGAAAGG
TTCATGATCATGGGGACGTTTCTGTTGAAAAGAATTCTTGTGAAAATCCA
ACTTTAACAAATTACAGAGGGCATATGCTGAAAAACGTTGAAGTTTGTGG
AAAAGTGTCTGAGAATATTGCTAATGAAGTTGAAAAAGCAGTGAAAAATG
AACACATTGCACTCACTGTTGGTGGTGACCATAGtatTGCAACAGGAACA
ATAATGGGACATCAAAGAGCTCGTGGTAACATTTGTTTACTATggATTGA
TGCACACAATGATATCAACACTTACGAGACTTCTGGCTCGAAAAATATGC
ATGGCATGTGTCTGTCTCATTTAGTCAAAGGTTTGCCTAATGTGCAAGAC
ATGCCTGGATATGAATGGGCACAACCTTGCTTGACACCTTTCGATATTGC
ATATATTGGTTTAAGAGATACTGACCCTGGTGAATATTCAATCACACATG
AACTTGGTATACTGACATTTTCAATGCACGAAGTTGATCGTTATGGAATT
GCAACTGTTGTTGAAAGAGCTATAGAATCTATTAATCCTAGACTTGATCG
ACCGATTCATTTGAGTTATGATATTGATTCACTGGATCCTATTCATTCAC
CGAGCACCGGGACTGCAGtataCGGTGGTTTGACATTACGTGAAGGGTTA
TATATCGGTGAACACATTAATAAAACGGGTTTATTAAGTGCATTGGATAT
CGTGGAGGTGAACCCTTACCTGGGAACTAGTGAAGAAGATGCCCACAAAA
CAGTGCAAACAGCTCTCCGAATTACTGAAGCGTGTCTCGGAAAACATCGC
TCCGGATATGTCGCAAAACGGAAGTTCAAATATGCTGCTCCTGAAGAATC
ATCGTAAAGTCGCATAAtacttttatgaaaagttttacTACGTATTCTGG
TAATGTTGCACTTGAAAGTAATTGGACCAATGTGGATCACCCTGGATGAG
TGATGCATTGTTGTCTAGTGGACAGAGCTGTTTGTAATGTGCTGTGTGTA
TTTCgttcaacgttcatttttaaTTACCAACGTAACGCATAGATGGACCC
GTGTGTAATGATAAAGACACTTTCTTTATGAAAAGGCGAGAATTTATTTA
CAAATCTTGCCAGAACCTGATTCAGTTATTAAtccttattttatttttct
atatttttttacaaaactaTTTATATTTTACGGTTTCATAAATCATGTAC
ATTTTTCTTCTGGATAATTTTATTGATAATATTCCCCAAATTGCACTTCA
ATTTTAACTGAGACATTTTCTCCTCAGCGCTGATGTCAAGCCATCATTTT
GCCAAATTAATTCATCAACGCGTAGTAATTCTTCGAAGTTAGCTTATCAA
ATCATTCATTGAAAAAAGGTCGCCTCCTCCGAGTTCGTTTCTTCTGAGAA
TGGCTTTTTTTCGATATATTGTTCAGTT
Run BLAST on NCBI

transcript from alignment at sc0000266:68717..83471+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017356 ID=TCONS_00017356|Name=TCONS_00017356|organism=Clytia hemisphaerica|type=transcript|length=14755bp|location=Sequence derived from alignment at sc0000266:68717..83471+ (Clytia hemisphaerica)
aaatagatacatgtctttcgcctttatgaagaagccttcaccgcAATATG
CCGCATCACAACATTCAACATTCAAGATGTCactataaaatttttgaaaa
aaaagattgaaaagttCTTTTAATCAAACTGAACTGAGCAGCTGTGAGCT
GAGAACTGTTCATATTTTTTCACGTACCCGACCCTACATTTATAATTTAC
TGCCTCTCTTaaaaagaaaacgagaaaaTGCTGTCAAAACGAAGCcatct
tttaaaatcattttgcaGTCACCTTGCAAAACAGTATCAATTTTCTCAGA
GGAGTATTGTCAGTTTTGGAACAGGGGAAGACGTTGCTCTCATCACTGCC
CCGTTTTCTGGTGGACAGGTACGTAGTTTATACAGTGTGCTGTgaagata
atttgaaaaatgtcagaattttgtattttcaactTGTAAACCTCTTAATC
TTTTTTGTCTTTACACGTGTCTACCTAACCAGGATCTGGTTGTGACTCAC
TTTTTTCTAATCTAATAGCTTTAGCCCCAGCCCCCGGAAACTTCTGCCAG
CGACGAAAGCCTTTATTTAGGATCCATGATGGCCTAGTCCAAAAGCTGGA
GCTCAAGTATTTTGCCTTTAATGATTCTGATGGGGAAAAGTAGttgtaaa
aaagtaaaagtaacaGGAAGAAAAAATACTGCAGATTTTCTGACTAGGTA
TGACCTGATCTTTTTTGGGCCACTTGGCGATTTTGATAACTTGAAAAAGT
CCTGAACATGACCTGAACTTGGCCTGGCCATATTCTGGGTGTGTTTGCGC
CTAAAAATTGCATTGCAGTCAGGAGTAATGGAGTTATTTCTATTTAGATG
AGTTGCACGTGGAGGCTCTAAGGCCAATGTTCCTAACTATCTAACTACTT
TAGAcatacaaacttttgcgagcagagacttttgtgatttttacaaattt
tggcctttttcgtgAAAgttaatgtctttgaaaattataacAGGGtaatt
tgcgaaagtttatgctcgcaaaaaaattattacatcaaagtcaaaaagaa
aaaccctttttatcagatttaaggaacatttttaactctttagcaaaatt
ttgtttaaaaattctaattttatcTGGAGAAAACAATTTGCGATAAatgt
tttttcctcaaattcgcaaaagtaaattctatttttcttgTCAACAACAA
TTGTTATTGCCAAAATTGGCAATCTTCAATCAATTCTGTTGAATCAGAAT
TTGATGATTGAATTAGAATTGCTGTTTTTTAGATATAAAAGTTGTTTTAC
TCAAAATTATTGTttgattttgtctttttaaGAGGGTTGGAATAAGTTTA
ACACTATCCCTGCACTATCAAAGCATTTATATTTGCTCATAAggcaaata
attttttatttattggtttacggATCCGCGGACGTTATTTTTgcccaaat
aaaaaaaatatatgtagatttcaaaaacttttattcacttttttcctctg
accttcaaaaaagaagaaagaaataaaaaaacatatactttaaacaggaa
aacaaaagaaaataaggGAAAAAAAGAGAGGGGTTAAATAATCTTTCCAT
CAATCCCTTAAATGTCAGGGAACTTCCCCATGGAATTTCTCTATCCACAA
AAAACTAACTAAATTATATAACTCTTTGTGTACacaatggattttcttca
ttttttttcttcttttgtaatcgcttttatttaaagtcctttAATGTGAT
AGTTAAAATTCAAGAGTAGATATAAAAATAGGCATAccagaaaagtggga
tgggggaacctaagggTGAACCCTAAATGGGAACCTATAACAACATGTTG
cactttattcttttgtttttaaatctaaaaaatctatactttggaaaatt
tcataaaattttattttattatttcctctggtttcagatttttaaaaaga
aaataaaaaaaaatttaaacatctattttatttttatttttttccaatct
CCTGTTCAGAACTTTTCCTCATAATGtctgtaaaccagaaaataaaaaag
taattgcctaaatatatggtaaaaattttacttgagatgtggaaattttg
aagaattttttttcaaataaagaatcaatttttctataaaaaatttctta
atttttgtgtTACTGTAACCtaggataattttccaaaaagcaaaaaaagg
ggACTCCACTGGAGATATGACACGAAAAAGGAAATAGAACATATTTTTAC
TAATTATGCATTTTTGTGTTATTGAATATTGTTTTATTGAATATTGTTTT
AAGGGTTGTTTTAAAAGGTGGTGCCGTACCATGGGGTACCCCAATGGTGC
ACCTTATGGTCTACCCCGAAAAAAATTTACAGACAAGACTGGAAAATAAT
ACGATGAAAATGATGGAAAATTACTAGCCTGTGGTCTTTTGATGCCAAAA
AAAAGCAACCCCAATCGGAAAATATCGGAATATAACATAAACAATAcgtt
ttctggtctgtaaaatttcaaagccCGCGCAAAGATTTTTTGTGAACCGA
TGGCTCTACATGAGATTCTTCCGCATATGGTATACAAAACAagaaaaggt
tgttttttcagtGAAATTTTATTCTGGAACAATTGTTATTGCTATTGGGG
TGATTATACTTCAATtacattcaaaatattgtttaaatAAACAATCCACA
ATCCAACAGAACTCTAAATTTTATGAGGAGAGTGtaattgtaaaaattgt
ttgttttttttcagcctAGAGCCGGAGTGGAACATGGTCCAAAAGCTCTG
CGAAATTCTGGTTTGGTTGACTGTATAGAGGCATTaggtttgtatttttt
ttactcATTGGAAATCTTAGATACAATTAATTATTCTTTGTAGTTGCCGA
TACATTGGCATACCCTGTCATAAAGTGTATGTAAATATTTTTCTGCAAAA
TGGGAAGAGCATTGTAAAAAGGTATTTAAATGTTAAGCAAGCGTTTTAAT
CAGCAGGTTTATACAAGGGTATAAAAGAAATAGCAAAGAAAAATTGCACA
GGCAATCAATGTCAGGCTCTTGTAATTTGGATTGCATTGTAACGGCATAA
TTGTAGTTGAGTTCCGACATGGGATTATAAATCCCgacgaaatttttaag
aattatcattaagaaagaagaaaagtggcgggactgaactgcaagtatat
agtaactgaacaataattttcctttttctagTTTAGTCACTTTAAAAGAA
GGATTGGCGGCTTGAACTTTGAAAACAGGGAAGAACGGGGCTAATTATAA
ATAATACGTACTAATTATAAGACTTTCAGGTATTTTTCGGGGCTGAAATT
CAATCCCGTCATTAAATTATCAGGACTGAAATACAGTCTCGTCAAGTACT
TGGTGGGactaaactgcaagtatatNAATTCAATCCCGTCATTAAATTAT
CAGGACTGAAATACAGTCTCGTCAAGTACTTGGTGGGactaaactgcaag
tatatatatagtaactgaacaataattttccttttgttaGTTTATTTAAA
AAGTCCATACCAAAGATACACTATTATAATTTAAAGCCCATTACCAATTA
TTCCCCGTTCTTTAAAGGCATTATACAAAGaggttattctaaagaacgga
agatacactatTATATCTTATAGATCATAGATCATACCCAAGTATTgtcc
gttctttaaaagcattatacaaaggggttattctaaagtAATAGGAGCCA
TCAAATAAGTgagttttcatttcatttatttccaattttttcacagATAA
GATCATCAATTTAGatctgaaaaaatcagtctcCCCCGGGGACTCAAGTG
CAATTATACCATTGTAACCAACCAAAACATTTCAGCATAGCCTTTTTTAT
CTCCaagaacattttttgtaatCTTTGATAAACAAAATCTATCTGTACCT
ATGATAATATTAACTTTTTAGGAAGAAAGGTTCATGATCATGGGGACGTT
TCTGTTGAAAAGAATTCTTGTGAAAATCCAACTTTAACAAATTACAGAGG
GCATATGCTGAAAAACGTTGAAGTTTGTGGAAAAGTGTCTGAGAATGTAA
GATATTTCTTCCTCAAGAAAAAGTTGGGCTTTGGTAAAATATATCAATGA
TGTTTTGCAGTAACTGTtcctttcttttaaattttggctCATTCAACCAG
GTATTCTAATTCGAGAGGCAGactattatttgtttttttataccGGTTTT
GAGATGATACCCATCCTTTATGCTTTATAGAATCTCAAAACATGTTTAAT
AACATATAGAATtaataatttattaattatttGACTACTAACAGATTGCT
AATGAAGTTGAAAAAGCAGTGAAAAATGAACACATTGCACTCACTGTTGG
TGGTGACCATAGGTGACTAATGTCCAAATCCTACTTCATCTTTtttttat
ctccataatatCTGACAACTAACTAGGGTTAAGAActttttgtaaatgaa
gaagcATGAAGCTCCATATATTTCTGTGCTAGTTTCAGACAGTTTCTAAG
TTTATTTCCTTTACGATGGTTTCTTTGAAAGATacgggattttttttttt
agaaagaacaacCAAGTTAAATTGTtgcacttttcaaaaatttctaatca
ttttttcaaattatagcTGAAATATCCAAAGTGATTCTGAAAAACAGCAC
AAGATTTCAGAATTTTGTCAATTTGAATCTAAAAAGTTGATAGAATTACt
ttcttctttcaaaagtttctaCTTACCCATGGAGTGATTTAACTTCAGCA
TTTCTAATTGCTACTAACTGAAGGTATTgagtttcaataaaaaattcccg
ttgctgaaaattgatgaaatttGATGGGTATCAATGAACCGAAAATGTTT
ActtaaatgttttaattttttagtatTGCAACAGGAACAATAATGGGACA
TCAAAGAGCTCGTGGTAACATTTGTTTACTATGggtaaaataattttgaa
atttttcagcgCTGTCATTCTATGCAACTTGCCGAACTGAGATGATAGTT
GACGGTCTAAAAAATTACTGTGATGATGAATTAAGATAGTTTTAAGTAAC
CGACATTCGATGATTTTTACAATATCAAATCCAATAAAGTTACTACGGTC
TCCACTtgtgatcgcactttttggcttcaatcatttttgcttggaaaaaa
gattaNCCATAATATCTGACAACTAACTAGGGTTAAGAActttttgtaaa
tgaagaagcATGAAGCTCCATATATTTCTGTGCTAGTTTCAGACAGTTTC
TAAGTTTATTTCCTTTACGATGGTTTCTTTGAAAGATacgggattttttt
ttttagaaagaacaacCAAGTTAAATTGTtgcacttttcaaaaatttcta
atcattttttcaaattatagcTGAAATATCCAAAGTGATTCTGAAAAAAC
AGCACAAGATTTCAGAATTTTGTCAATTTGAATCTAAAAAGTTGATAGAA
TTACtttcttctttcaaaagtttctaCTTACCCATAGAGTGATTTAACTT
CAGCATTTCTAATTGCTACTAACTGAAGGTATTgagtttcaataaaaaat
tcccgtagctgaaaattgatgaaattcGATGGGTATCAATGAACCGAAAA
TGTTTActtaaatgttttaattttttagtatTGCAACAGGAACAATAATG
GGACATCAAAGAGCTCGTGGTAACATTTGTTTACTATgggtaaaataatt
ttaaaattttgcagcGCTGTCATTCTATGCAACCTGCCGAACTGAAATGA
TAGTTGACTAAAAAATTACTGTGATGATGAATTAAGATAGTTTTAAGTAA
CCGACATTCGATGATTTTTACAATATGAAATCCAATAATTTACTACGGTC
TCCACTtgtgatcgcactttttggctccaataatttttgcttggaaaaaa
gattacgtcataaaaatgtagcgcgcgctcgaaaaaaaggTTGAACCACT
GACCTTCATATATCtttggaccaagcaatatccgccatctttgatcggag
tttttttggaattggtacccgagaagaagccagtgcaatgttaaaaatta
acgtctaacgccgctacatcatcaaaagaatttgaggaaaggTAGACCCA
GCGCTCTcaatgcatttacaccgctatcgagtagtgccgccattagggta
ccacttttcaaaaaactccgatcaaagattttgcttggctgggattgaga
agcttggtccagggtatataaaggtcagtgggttgaacacatttcaactt
ttttcaactgcTACGTCAGATCGCgtcaatggagttgcttcattttcttt
ttaaccAATAGCGTTGTTTGGGCGAGGACGAATTCTGGACAATAAAACGG
TCACGGTTTGACAGTATATTTACAGCTAgaaagtaaacacaaaactAGTT
TAGAAACAAGTACATAAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCCACAACgtaaaaaaacta
attaaaaagaGTTTAGCAATACACAAAACGATAaacgataaaaaagtaat
tccCAACGCAACAAATTGccaaaacactccccggcggatGCAAGGCAGTG
CAGTGATCAGGTGGACGGGTAAATACACAAGCCTTCGAAATGCCATTTAT
TTCATCAATGTTCGAAAAACTTTTAACGAATTCTTCCTTTAGGTCATATC
CAAGCACTTCCGTTTCTTCGAGCTCCATCGCCATTTTCGAGCGCCCTTTA
AGATGTTgatttgcccaaatttgccaaaacttTGAAGTTGCCATCTTGCA
CATTTGGATGGTCTTCATCTTCTGTAAATTCTCTTGATGAGCTCGTACAT
CGGGCGCGAAATCTAATGGCTGAAACAAATCACTTTtaatcactttcgat
ttcttttcTCTCTCGCGTAGATATACCAACTCACTTTCGATAAGTGAATT
AtttgatgattgaatttcctGAACATTAGATTTTTGATCTCGCCACAAAC
AAATGCACGATATGCAAAAGCCTAACTAAAGGCTNNNNNNNNNACTAAAT
TATGAAATACTTACAAAATTCATCACATAATATCTCTACGAAAGATATCT
CGCCACAAACAAATGCACGATATGCAAAAGCCCAAAACGATTGAGAACTA
AAGGCTTAAAAAGCTTCTAAAAGTTGAGAACGATTTTCTCTGAGAACGAT
TTTCTCCTGACACACATCTTGTCACTATCACGATTTGATAAGAGTGCATG
CAGAAAAGGCGAGTGGAACAAGCTTATAAACGAGCTACAAcgtaaaaaac
taattaaaaagaGTTTAGCAATACACAAAACGATAaacgataaaaaagta
attccCAACGCAACAAATTGCCAAAAcaagcgtggaagctttgctcgaaa
acgTACGATCGAAGCGCGTGCAATAGGAGACCAGCCTTTAATCATCTGTT
ACTGCTCAGACCCAACATCCAAGAAAGCCCCTGAATGGTATACAAGTTAT
GCCCTCTTAATTTCTTGAAGCGTGAATGTTTTTATTCCAATCTTGATTTT
TCTAGATTGATGCACACAATGATATCAACACTTACGAGACTTCTGGCTCG
AAAAATATGCATGGCATGTGTCTGTCTCATTTAGTCAAAGGTTTGCCTAA
TGTAGGGATTagattgttttttgattttttttctttgtaacgCTCTCGTC
AAGATCATGTTTTACCCTAATTTGACTCTTGGCCCAGCGGGTCCACATAA
TAGATTGACTGGATGACAGGATTAAATCACCCTTCATTAGATTTAGCGAA
ACTTTGCataaaaagcaaagttcagctaGAAGTATACTCTAGTCTACGTT
TAAGTCGTCTTTCACAAGCTAAACCTATATTTTTACATTCCATCGTATGT
TTTAATTTCTATAATGCATCAGTTTTGTATGAGTGACATTCTTCCTTTTC
ATTTTAAGGTGCAAGACATGCCTGGATATGAATGGGCACAACCTTGGTAA
GGCCTCTTATTATGCTTTTGTTTGGAACTCCCTATCCATAATAAAACATG
TTTGAATTAATTCAAGATCGAATAATTCACCTACTAAATACAGCAATGTA
GTCAAAACTAGATTATTTAAAAGGGACTTTTTTTCTGTTCATATGTTGTA
AgtaaatattttcgaaaattgataAACGAGGGGGCGGGATCTTTTCAGGT
AGGTCCAGGGGATTGGAAAAAATCCGAAAATTTAATAAATCCTTATGTTT
ATTAGAAACCGAAGAGTAAGATTTCTTAGCAGGTATATCTAAGAATTATT
ATAATTTCACTGGTtttgatttcaatgattttctCTTTCAGCTTGACACC
TTTCGATATTGCATATATTGGTTTAAGAGATACTGACCCTGGTGAATAGT
AAGAATCTTCGTCATATTTCCCAATCGAGGTTCTTCAGGTTATGCCGTGA
GGTTCGTAAAAAAGAGGTGTTTAAAAAAACCGCCATGGGTTTTGCAAAAG
TTATATGTAttgtacagcacctgaccccgagaatgtaggtgaattttgaa
tcagacctgaaagatgtagatttgcattttagaaaacattgaatgttttc
aacgaaattttgaactcccaaaatcctttcccaggggttagatTCATTAC
TTTTCATAGATAGGCTATTtcttttggtccttgaagttgactcccatttt
cgttataacccccagaatgtaggtttggttttatggctttaaatctagta
atagtaaaatgttaaTGTTTTTTCAATTGgattaattataacagcaaatt
ttagaaatattttgtgccaaaacaatattctaaagagcactttgttattc
tgaaaattgaatttttttgctttttaacccccagaatgtaagTGAAAAGA
TTTGGTTGTTGGGAGCGGAATTTtagtattcatcggaaattattgttctc
taagtgaaatttatgatttataaatatagCCTGACAAAAgtttaacaaag
atattaattttatcgtgctacaaatgaggaaaagtaaaagaaaggacgaa
aagaagagacatgaaaattgtttttattttgttggttGAAAATTTCGCGT
TAAAATATGTagataatgtaacaacacccctcCCTCACAtccccagtgga
acttttttccacaGCGGGGAGAAAAATTTCTACTAAAGGCACAATGGGGa
taggaattctattgttccaaacttaggAAAATCTTCTGATTGGGcttggg
tcccagcgggtctgggagacgtgtaaaagctcaaaatgtcaacattaatc
atctctcaggtagtactttcatgtAATGAAAGTACAagaaacaagtttta
tataatttgacagacttttcaTGTCGGGTTATGAAGGCCCCCAAActgta
ggtcaactaacccctgaaggtaggtcaaacattttcgtcaaaatatctaa
cttagaacaataaatattgaaatgaactattttccccatttccttagttc
attaggaataagaaaatacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
agttcattaggaataagaaaataccctatcatcataacttaattccaata
gatttcgatttagagaggatttatttaaaaaatgtctcaattcgggTAGT
AGCCAATCACATTCAATTCAGATTTCcgttggaaaaaaattaattcaagt
taaaatttcatgtctagaaataataagtaatatgtaacagtatgccctga
aacaacttttcatgaagttgaactatcgtcaAGGCTACAATgcttaaaaa
tgagaaacctacattctcggggtttactacattctcggggtcaggtgctg
tagtAAAAATAAGCCATAAAACGTTCAAATTATGAAGGCGATAGTgagta
cctcaccaaaaaccggcaTTTTCACTCCGTTTGGTTTGTTCTACTGCGTA
GAAAAAAAGCCGTGATGACTTCTTGTATAGACTATGAAAGCAATagctta
cgcaaatcgaacgtcATATTCCATAACGTTGGAAGGTACGTAACAAAGCG
AAACTGAAAAACAGCTTTGCATATATTTTGGAGCTTAATCAACGACCTTT
CAACCTTTCTCAGTTTGGTTTGGGAGGACTAGGATGGTATGTTACCCGCG
AGTTAGCCATACAGAAGTGAATTTAAAAAGATCTTCAActgttttttatt
taagaaaatCATTGTAAGATTTTCACCTATACATTGAACAATAAAGGAAT
AAGAAAAACGGGCTTTCCCAGGAAAAATTTGTAGCCCCTATTTAGGATGT
CTTTTTGGGAAAGGTGCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCGTAGatctta
ttttcaatttttcaggaccccttTGGATTTTGATTTCGcatttttggacc
accctggattctCCACCACATTTTACTTAACACCCTGGATTTTTGCCCTC
GAAAAAACAAGAATTCCctagattttttatttgttcCACCACCCGGACGA
ACGTAACACTTCCTCAACATAGGGAATACATATTTCTGGAAAGCCCAATG
CTTACTCTGAGCAAAGTAACTATATTTTTCTTAGTTCAATCACACATGAA
CTTGGTATACTGACATTTTCAATGCACGAAGTTGATCGTTATGGAATTGC
AACTGTTGTTGAAAGAGCTATAGAATCTATTAATCCTAGGTAAAACTTTC
TAATTTGTTTTCTACGAATTTTCTAGATGTTGTTATACTATAGTTATTTT
ATTGTGTGTTATGTTGTTTTTGTCTCTTGCATGATTTTCTACACTGTTTA
TGATCTAAATGATACTAAAAGATATTTTCTAAGCTAAATGATGATGAATT
GAAATGTATAGCGTTTGATCGAAGGAACAAATCTACCATTGAGAAAAGCT
TCAGTCTTGTTTAAAAGTCGCTGCGGTATTCACATTTAGTCCTTAATGAT
gatataaattttgttttgatgtttaaatGTAGACTTGATCGACCGATTCA
TTTGAGTTATGATATTGATTCACTGGATCCTATTCATTCACCGAGCACCG
GGACTGCAGGTTTGCATCTTCTTTTTCCCGATCTATTCTAGGGGATGGGG
TCGCTTTGCAATTTTTCGGGAAATCACCTCAATAGCATTTTATCATGACC
CCCCCCTTTCATAAAATTTACCTGAAAAAGTgtcaaaaccttcatttttt
aagcggtttttggggaaattatccaaaaatcgCTTAATATTGACCCCCCC
Ccgattttatgaattttctcccagagtaccacccctacaattaagcacag
aagaaTACTAATTGATACCAACTGTAGACTTTCATCTTTTAAATGTGTTG
TTGGCTGGTGTTGTTGTACACggtttttatatataagaatacactttata
agaatgtccatgatgaaaatggccaaaaattaagaataatgctaagaata
tcaccatcatggaattttgctgctcaagctaagaatgccatttttagagc
attttcaattaagaattgtcaattacccccaagtaatgctcactactttc
acaaaaatgccattttatgcttgaggcgTATGTAAATGCTGCAAGATTAT
TTTAAGATGAtattcccaaaaaagttaagaatatccatgatgaaatggat
ttacgccattcttataaaaaagcgtttatttCCCCATTTCCACGATTGAA
TAATTACAATTAACAGGTTTCTCTTTCTTGGCAATgatagatttttttta
agaaaaatgtaTCTGTACATTctgttttactttgtaaaaaagtAGAGTTT
GTAAAATAGTAGTGGCTTTTGAGTATTCATTCAGcaagttttcttttatt
tttatttttagtataCGGTGGTTTGACATTACGTGAAGGGTTATATATCG
GTGAACACATTAATAAAACGGGTGAGACTTTTCACTGACCAaaacaaaat
tccaaaaaattagaaaaaccagTGTCCTATACACATAATAGTTCCTTTGA
TTATCTAGGTTCATGTAAAAATATAGAATATCGGAAATACagcggagtct
ccataactcgaacccgcaCGGGAAACACAACTTTTTTCGATTTAAGGAAA
ATTTCGACTTATGGAACTTAGTTTACAAGACATTGTTAAGTGAAGGACGA
GAAAACtggttcgagttaagaagatattttagttatagaggttcgagtta
aagagactccactgtataaaaAAATCGGCTCACCATCTTTCCTTTTTTTG
GGCAGGTTTATTAAGTGCATTGGATATCGTGGAGGTGAACCCTTACCTGG
GAACTAGTGAAGAAGATGCCCACAAAACAGTGCAAACAGCTCTCCGAATT
ACTGAAGCGTGTCTCGGAAAACATCGCTCCGGATATGTCGCAAAACGGAA
GTTCAAATATGCTGCTCCTGAAGAATCATCGTAAAGTCGCATAAtacttt
tatgaaaagttttacTACGTATTCTGGTAATGTTGCACTTGAAAGTAATT
GGACCAATGTGGATCACCCTGGATGAGTGATGCATTGTTGTCTAGTGGAC
AGAGCTGTTTGTAATGTGCTGTGTGTATTTCgttcaacgttcatttttaa
TTACCAACGTAACGCATAGATGGACCCGTGTGTAATGATAAAGACACTTT
CTTTATGAAAAGGCGAGAATTTATTTACAAATCTTGCCAGAACCTGATTC
AGTTATTAAtccttattttatttttctatatttttttacaaaactaTTTA
TATTTTACGGTTTCATAAATCATGTACATTTTTCTTCTGGATAATTTTAT
TGATAATATTCCCCAAATTGCACTTCAATTTTAACTGAGACATTTTCTCC
TCAGCGCTGATGTCAAGCCATCATTTTGCCAAATTAATTCATCAACGCGT
AGTAATTCTTCGAAGTTAGCTTATCAAATCATTCATTGAAAAAAGGTCGC
CTCCTCCGAGTTCGTTTCTTCTGAGAATGGCTTTTTTTCGATATATTGTT
CAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009716XLOC_009716Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017356-exon-sc0000266-1491911889:68717..69084TCONS_00017356-exon-sc0000266-1491911889:68717..69084Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:68717..69084TCONS_00017356-exon-sc0000266-1510915933:68717..69084Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:68717..69084TCONS_00017356-exon-sc0000266-1575043694:68717..69084Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:71481..71553TCONS_00017356-exon-sc0000266-1491911889:71481..71553Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:71481..71553TCONS_00017356-exon-sc0000266-1510915933:71481..71553Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:71481..71553TCONS_00017356-exon-sc0000266-1575043694:71481..71553Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:72688..72812TCONS_00017356-exon-sc0000266-1491911889:72688..72812Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:72688..72812TCONS_00017356-exon-sc0000266-1510915933:72688..72812Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:72688..72812TCONS_00017356-exon-sc0000266-1575043694:72688..72812Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:73061..73128TCONS_00017356-exon-sc0000266-1491911889:73061..73128Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:73061..73128TCONS_00017356-exon-sc0000266-1510915933:73061..73128Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:73061..73128TCONS_00017356-exon-sc0000266-1575043694:73061..73128Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:74395..74455TCONS_00017356-exon-sc0000266-1491911889:74395..74455Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:74395..74455TCONS_00017356-exon-sc0000266-1510915933:74395..74455Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:74395..74455TCONS_00017356-exon-sc0000266-1575043694:74395..74455Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:77372..77467TCONS_00017356-exon-sc0000266-1491911889:77372..77467Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:77372..77467TCONS_00017356-exon-sc0000266-1510915933:77372..77467Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:77372..77467TCONS_00017356-exon-sc0000266-1575043694:77372..77467Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:77775..77812TCONS_00017356-exon-sc0000266-1491911889:77775..77812Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:77775..77812TCONS_00017356-exon-sc0000266-1510915933:77775..77812Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:77775..77812TCONS_00017356-exon-sc0000266-1575043694:77775..77812Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:78158..78214TCONS_00017356-exon-sc0000266-1491911889:78158..78214Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:78158..78214TCONS_00017356-exon-sc0000266-1510915933:78158..78214Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:78158..78214TCONS_00017356-exon-sc0000266-1575043694:78158..78214Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:81051..81155TCONS_00017356-exon-sc0000266-1491911889:81051..81155Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:81051..81155TCONS_00017356-exon-sc0000266-1510915933:81051..81155Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:81051..81155TCONS_00017356-exon-sc0000266-1575043694:81051..81155Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:81449..81525TCONS_00017356-exon-sc0000266-1491911889:81449..81525Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:81449..81525TCONS_00017356-exon-sc0000266-1510915933:81449..81525Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:81449..81525TCONS_00017356-exon-sc0000266-1575043694:81449..81525Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:82328..82387TCONS_00017356-exon-sc0000266-1491911889:82328..82387Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:82328..82387TCONS_00017356-exon-sc0000266-1510915933:82328..82387Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:82328..82387TCONS_00017356-exon-sc0000266-1575043694:82328..82387Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1491911889:82722..83471TCONS_00017356-exon-sc0000266-1491911889:82722..83471Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1510915933:82722..83471TCONS_00017356-exon-sc0000266-1510915933:82722..83471Clytia hemisphaericaexon
TCONS_00017356-exon-sc0000266-1575043694:82722..83471TCONS_00017356-exon-sc0000266-1575043694:82722..83471Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000266supercontigsc0000266:68717..83471 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.14796	2.18465	5.39986	3.84448	3.52945	2.72704	3.56411	5.60021	3.2325	3.41375	1.18965	2.89719	2.5728	1.87118	0.944727	2.22325	4.94081	5.92608	3.25836	4.36366	8.96744	8.22849	5.14652	2.49403	0.699327	2.45154	9.08957	5.76918	0.601976	0.636548
Blast
[Close]
BLAST of TCONS_00017356 vs. Swiss-Prot (Human)
Match: ARGI1 (Arginase-1 OS=Homo sapiens GN=ARG1 PE=1 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 1.070e-94
Identity = 152/309 (49.19%), Postives = 199/309 (64.40%), Query Frame = 3 
Query:  333 VALITAPFSGGQPRAGVEHGPKALRNSGLVDCIEALGRKVHDHGDVSVEKNSCENPTLTNYRGHMLKNVEVCGKVSENIANEVEKAVKNEHIALTVGGDHSIATGTIMGHQRARGNICLLWIDAHNDINTYETSGSKNMHGMCLSHLVKGLP-NVQDMPGYEWAQPCLTPFDIAYIGLRDTDPGEYSITHELGILTFSMHEVDRYGIATVVERAIESINPRLDRPIHLSYDIDSLDPIHSPSTGTAVYGGLTLREGLYIGEHINKTGLLSALDIVEVNPYLGTSEEDAHKTVQTALRITEACLGKHRSG 1256
            + +I APFS GQPR GVE GP  LR +GL++ ++     V D+GD+       ++P        ++KN    GK SE +A +V +  KN  I+L +GGDHS+A G+I GH R   ++ ++W+DAH DINT  T+ S N+HG  +S L+K L   + D+PG+ W  PC++  DI YIGLRD DPGE+ I   LGI  FSM EVDR GI  V+E  +  +  R  RPIHLS+D+D LDP  +P+TGT V GGLT REGLYI E I KTGLLS LDI+EVNP LG + E+  +TV TA+ IT AC G  R G
Sbjct:    8 IGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPNDSPF------QIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAITLACFGLAREG 310
The following BLAST results are available for this feature:
BLAST of TCONS_00017356 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARGI11.070e-9449.19Arginase-1 OS=Homo sapiens GN=ARG1 PE=1 SV=2[more]
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