TCONS_00017299 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017299
Unique NameTCONS_00017299
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length217

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017299 ID=TCONS_00017299|Name=TCONS_00017299|organism=Clytia hemisphaerica|type=transcript|length=217bp
CAACTTGGTTTGTATCAGCTCTCTTTGTCTTCTACTGTTATTATTACCAA
TCACAGCAGCAAATGAGGATTGTCAAGATGCATCACCGTTATGTAAACAC
ATTGCGTCAAATTGTGACGTTCACGTTATGTTAGCTGTTGCTTGCCAGAA
AACGTGCGGCGAATGTAGCGTGGATGGTAACACTAACAATCACTTGGCTA
ATTTAAACGGCGCAGTC
Run BLAST on NCBI

transcript from alignment at sc0000264:92369..93003-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017299 ID=TCONS_00017299|Name=TCONS_00017299|organism=Clytia hemisphaerica|type=transcript|length=635bp|location=Sequence derived from alignment at sc0000264:92369..93003- (Clytia hemisphaerica)
CAACTTGGTTTGTATCAGCTCTCTTTGTCTTCTACTGTTATTATTACCAA
TCACAGCAGGTAAAATTCTATTCAGCTAAAATCTAATAGTCAGGGGAAAA
TTTAATGCCCCTGTCTCATCAGTTGACTCCGTGAGATTCTTTTCGCCGCT
GGGAAAAGAATGAAGAAGTTGATGCCAATTGGGAACGGAAAATGTCCTTT
GTTTGTGAATGGGGGTTTTATTGGTCACATATTGTTTAGTACTGCTCAAA
ATTCGATGGGGATTCCAAAACCTTACTCTCTTTGCACTAGTGGACTTGCC
AGAAGGTTCAGTGTCCAATTTATGAAATTCAATGGTATTATTCTCATCGG
GAGCAAATTTAGGCCAATTCCTCTAGCGGGTAGAGGTACAGCCAGGACTC
TAGAGCAGGTGTATACTTTTTTAAATGGCGCAAGATGGTCTCTCATCTAC
CTTAAACACATAAAATTTCTTCCATAGCAAATGAGGATTGTCAAGATGCA
TCACCGTTATGTAAACACATTGCGTCAAATTGTGACGTTCACGTTATGTT
AGCTGTTGCTTGCCAGAAAACGTGCGGCGAATGTAGCGTGGATGGTAACA
CTAACAATCACTTGGCTAATTTAAACGGCGCAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009678XLOC_009678Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017299-exon-sc0000264-1575043694:92945..93003TCONS_00017299-exon-sc0000264-1575043694:92945..93003Clytia hemisphaericaexon
TCONS_00017299-exon-sc0000264-1575043694:92369..92526TCONS_00017299-exon-sc0000264-1575043694:92369..92526Clytia hemisphaericaexon
TCONS_00017299-exon-sc0000264-1510915933:92945..93003TCONS_00017299-exon-sc0000264-1510915933:92945..93003Clytia hemisphaericaexon
TCONS_00017299-exon-sc0000264-1510915933:92369..92526TCONS_00017299-exon-sc0000264-1510915933:92369..92526Clytia hemisphaericaexon
TCONS_00017299-exon-sc0000264-1491911889:92945..93003TCONS_00017299-exon-sc0000264-1491911889:92945..93003Clytia hemisphaericaexon
TCONS_00017299-exon-sc0000264-1491911889:92369..92526TCONS_00017299-exon-sc0000264-1491911889:92369..92526Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:92369..93003 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.74766	2.76205	1.66615	0	0	1.35271	0	0	0.861895	11.6361	1.47177	2.36914	0	1.99431	0	0	0	0	0	0	1.3914	2.48359	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017299 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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