TCONS_00017259 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017259
Unique NameTCONS_00017259
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017259 ID=TCONS_00017259|Name=TCONS_00017259|organism=Clytia hemisphaerica|type=transcript|length=3225bp
CAAACACTCTGTTGTATTTCCAGTAATGAGGTTGAATTGACGTGAAAAGT
CAGTCAGGAGTTGACCGTTTGGATTTTGTACATGAACAGAGGAAATACCT
TCAATTTTAGTTTACCAAGTTACCAAGTTTTTAATTATTGATAACATtaa
taagttatgaaaaaatgagtaataaagcaattttttatttttcagagaag
aaaaaaagctgaaaaatgtttTACGCAAATTTCGTATTGGCCAAAAAGGG
TCCACTTGCCAGAGTATGGTTAGCAGCGCATTGGGAGAAGAAGTTAAGCA
AGACACATGTTTTTGAAACTGACTTACAAAGCTCTATTGAGAGCATTATA
TCACCAAAAGTGAAAATTGCCCTTAGGACTTCTGGACATTTACTACTTGG
CGTTGTACGCATATATTCACGAAAAGCTAAATATTTATTAGCTGACTGTA
CAGAGGCATTGATTAAAATTAAGATGGCTTTTAGGCCTGATGTTGTTGAT
TTACCCATTGATAATCAAAAAGCTGCTGCCTCTGCAATTACACTTCCAGA
ATTTCAAGAGTGGGACGCAATGGTCAACAATATGGGCAAATTTGACATCA
CAGTGACGCTCCAAAACAATCAATGTCGAGTTGAAGAAATCACAATGAAA
GAAGATTTATTCTCATCAAGGTATCTGTCAAATGATAATTTCTTTGGTGA
TGTGCCCTTTGGAGAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCA
CAATGGATCACACTCTGAACAATTTGACGGCAGATGTCTCAAAAACACAC
CTTGAAGAAGATGAAACAGGACTCAAAGATAAATCATCCTTGTCATTGAA
CCAAAGTAACCTAGAACTTGCATTAAATGATCCAATGATGGAGGATGTTG
GATTCGGAGCAGGTGAAGGGTTGGATTTTCTTGAAGATTTTGGTGAGGTA
AACGGTCTTGATGAAGATCTGGATAAAGTAGCTCCCATTGAAGATCTAGA
CGAAACTTTGAAAGATAaagaaaaggagaaagaaaGAGAGGATCAGGAAG
CTGCTGATCGATCAGTTGCTGAAGCTGTGGCTGAACTAACTGGTGAAAAG
GAGACAGTTGTTGACCCTGAACCTGTTTTAGATGAAGATGATGTGGATAA
TGAAGCAATTGTTCCTGATCAACCAACTGAAACCGCCACAACTGGTATGG
AGACGACATTGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTG
ACTGTTGgtaaagagaaaagaaagaagaggaaaAGAAAGCTTGTTGTGGA
CAATGAGAAAATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTT
ATGACGACTTGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAgA
ATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGACCGACCCATCTC
CTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAAAGCACATCAAA
CAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTCAAGAAGACGAA
GAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAGGCTGACGAAAA
CGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGATATCCAAGAGA
CCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAACCACCGATAGAC
GATATACCTCCTCCTATGGACATTGATATGGAAAACCCAGACCAAGAGAA
CGATATAACCGTCCCACCACCCTTCCAACTTGACGTGACCGAGAAAACCA
TAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTGAAGACGAAGAG
CCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGGACCAAACGTAC
ACAACAGACTCTCAATTTATtagaaaaaacattgaaaaagaaatcagcTC
CAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTAAACAAGCGACA
CATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAATGTATTACAGT
TGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCCTGGGGAGAGAT
TCAATTCATATTCCTAAAACTGTTTTAAAAACCATGCCGGATTATATTTT
ATGATGGCAGTTCTTTTAACTTATTGGTGTACATATACCGAACGACCAAC
CCGGTTTAACCTGAAAATCCTACCGGCCTTATGCTTGACAATATACACCC
GCGAGAAAACAACAATCGTACTAATTTGCTGCAAAAAAACGATTTACAAG
ATATATTATGAtgatattttattgattttaaccatgttcaaatttttttt
tcacaattcatCAAACTCTAAATTTTTTCATCTCTATTTTCATATATACC
ACCATCTCTAACTCTAACGAttataatattttatcaaaaaagtttttaga
atccTAATATTTTGAACATTATTATATTTCTGTGATAAGAATAAGACACA
GGCAGAAGGAATATTCCAAATCAATCAGGAAAGTAAGGGGCTTATAAACT
CCTTATTTTGACCTTGATTTCATAGTTAGGCTTAGGCGTATTTTATgtta
attattttgttttataattttCGTTCTTAGAAATTTTCCCTTttatattg
tttattttttattttttctggtATGTTATGTAGCAGGCAAGTTTGTGAAA
AGGTCTGCTAACTAAATGCTTAGGAAAGTTTGCATTAAATCAATTGACAA
TACATTACAGCCTGAATGTCTCGCAGAATCTTGAACTTCTAATTCATGAA
GAAGGAATGTTTCGGCTTTTGGGAATGGCTTGGCTTCGCCGTAATTGATA
AAAGTTTACTGCACAGTAAATATTATATTAATATGTCATTCAAGGATCCT
CTGCGAATCACTTTTCATAATAAATTTAGGTTTTGTACTAGTTGAGCATT
CTAAAGAGTAAGTATCCAGTCCTTTCATCAAGTCTGTGTTTTTATTGTAG
agaattttttaatgtttaaatgCGTTTTAGCCTGTATcagttttttggtt
tgttttcatttttggttACATTGTAAGTATTATTATCATTAGCATCAGCG
ATATTTTAAATCTTtcgatattattattatatgaaaataaaaagaaactt
gtaTTTTGTATTTGCTCACTACTTACTTGTACAGGGAtattaaacatttt
aaaagaaaattgagttgaaaaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00017259-protein

>TCONS_00017259-protein ID=TCONS_00017259-protein|Name=TCONS_00017259-protein|organism=Clytia hemisphaerica|type=polypeptide|length=633bp
MFYANFVLAKKGPLARVWLAAHWEKKLSKTHVFETDLQSSIESIISPKVK
IALRTSGHLLLGVVRIYSRKAKYLLADCTEALIKIKMAFRPDVVDLPIDN
QKAAASAITLPEFQEWDAMVNNMGKFDITVTLQNNQCRVEEITMKEDLFS
SRYLSNDNFFGDVPFGETSDGEIMRDEVTMDHTLNNLTADVSKTHLEEDE
TGLKDKSSLSLNQSNLELALNDPMMEDVGFGAGEGLDFLEDFGEVNGLDE
DLDKVAPIEDLDETLKDKEKEKEREDQEAADRSVAEAVAELTGEKETVVD
PEPVLDEDDVDNEAIVPDQPTETATTGMETTLFYTEAVALEPVEVTVGKE
KRKKRKRKLVVDNEKIIQRDQMKKQIESYDDLVKAAVVAPPTRWRMSALD
VTAKMLFDRPISFKSKKARLEELYKAHQTTKIPEDLIIPSSQEDEEVQLE
DPTEILREADENATNLPELTVENTDIQETILPEEQEEERFEPPIDDIPPP
MDIDMENPDQENDITVPPPFQLDVTEKTINETVNESSAKETEDEEPEAEK
TDQQDKRWTKRTQQTLNLLEKTLKKKSAPVNFKDLTKKYNRKQATHRFYT
LLTLSKEKCITVEQDGLFADILIHPGERFNSYS
Run BLAST on NCBI

transcript from alignment at sc0000261:371486..376978-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017259 ID=TCONS_00017259|Name=TCONS_00017259|organism=Clytia hemisphaerica|type=transcript|length=5493bp|location=Sequence derived from alignment at sc0000261:371486..376978- (Clytia hemisphaerica)
CAAACACTCTGTTGTATTTCCAGTAATGAGGTTGAATTGACGTGAAAAGT
CAGTCAGGAGTTGACCGTTTGGATTTTGTACATGAACAGAGGAAATACCT
TCAATTTTAGTTTACCAAGTTACCAAGTTTTTAATTATTGATAACATTAA
TAAGTTATGAAAAAATGAGTAATAAAGCAATTTTTTATTTTTCAGAGAAG
AAAAAAAGCTGAAAAATGTTTTACGCAAATTTCGTATTGGCCAAAAAGGG
TCCACTTGCCAGAGTATGGTTAGCAGCGCATTGGGAGAAGAAGTTAAGCA
AGACACATGTTTTTGAAACTGACTTACAAAGCTCTATTGAGAGCATTATA
TCACCAAAAGTGAAAATTGCCCTTAGGACTTCTGGACATTTACTACTTGG
CGTTGTACGCATATATTCACGAAAAGCTAAATATTTATTAGCTGACTGTA
CAGAGGCATTGATTAAAATTAAGATGGCTTTTAGGCCTGATGTTGTTGAT
TTACCCATTGATAATCAAAAAGCTGCTGCCTCTGCAATTACACTTCCAGA
ATTTCAAGAGTGGGACGCAATGGTCAACAATATGGGGTAAGTAAAAATTT
TGAGATATGTTTTTAATAATAAATTTTTATCAAGTGTGCGCTATTCAGCT
GTCGAAAGTGCTCAATGGTATCAAGTATTAGTGAAATTCAATGAATTAAG
TCATTACATCAATATTTATTCATATTGCTTTTCTTATATTTCAAATTAAG
TCCGTTCTTATTTTCAAGAAATTTTTCCTCCTTTGTCTGTCTGTACATCC
CAGGGAGGCTACAGTATATCATTTCAACAATTCCAGGCTTTTGAACAGTC
AATCAACATTCCCTTTGCTTTTTGGAATTAAGTTTGTGTTTATGGAGTGC
TTTATATAAATTTAGAACAGTGAAATCATGGTTTCAATTCAATCACACTC
CCTGGGGATTTTATTATTCCTTGAACACCTCATTATGCAGTGTGAAATGA
TTTAGAGTTTTATTTTAAATTTGATTCAAATATTTGTATCTCTCTTACTT
TTCACTCAAGAGTTTCGCTAGAGTTTAAACACATTTTTACCAAAGATGTC
ATATTCATATTTGCAAAATCTCAAATCAATCAGACGAACATTTCAAAAGT
CATAAAGATTTTTCGCTTTTTGGGGCCTCTTTACCCAAGTTTCTCGAAGG
GTTAATTTACATACATTTTGCTTTATTATGTTAAATTAACTTAAGTATTA
CAATTAGCTTGAATATATCAATGTTTCTTTACCTTTTTAGCAAATTTGAC
ATCACAGTGACGCTCCAAAACAATCAATGTCGAGTTGAAGAAATCACAAT
GAAAGAAGATTTATTCTCATCAAGGTTTGTCACTTTACCCACTCTCTTTT
GCACTGTAATTTGAAATTGTCGGCAAAAATATTATAGGTTATTTCACTTC
ATAAAGAGATAAACAGAATGCAAGATGATAAGATAAGAATCCATTGTTAG
AGATTTCAGATTTTAGGGTTATCTCAACCTGAGAAAAGAATTAAACAAAA
AGATTTGGAGGTTCTGGTTAGGACCATGAAGTAATCTACATGCAAAAGAT
CTCAAACCAAATCAGATATTATCCCTTTAAAATGAGTACCTGTGTAGGTC
AAGCATTTCTTCAATTTTTGGATTATCAGGACGTTGTTATTTGAGTGCTT
AATTCATTGCAATTTTGAATTGACCAATTGTGATGAATCATCTTGTATTA
TTTTCACCGTAGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCT
TTGGAGAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGAT
CACACTCTGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGA
AGATGAAACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTA
ACCTAGGTAAATGGATAATCTAGTTAGTAGTAGATAAAGCAAAGGTTGTT
AGATATACACTTTTCAATCTAGTAGCATCACAGAGGACTTGAATTCTACC
AAGGTTGAATGGCTTTAAACTGTTATTGGTGCAAAGCGTGATAGTTATGT
ACAGAAATTATAATTAATATTGTCTTTAATATTTTNAGCGTGATAGTTAT
GTACAAAAATTATAAATAACTAATATTGTATTTAATATTTCCTTCAGAAC
TTGCATTAAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAA
GGGTTGGATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGA
TCTGGATAAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATA
AAGAAAAGGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTT
GCTGAAGCTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCC
TGAACCTGTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTG
ATCAACCAACTGGTAAGTGATTGAATTATTTCAGTAGTAAACATTCAGTG
TCTTATAAGTAGAACTAGGAAAATGAAAAAGGAACCTGTTCTTATAGTTA
TTTAACTATTGCAGGTGAAATGGAATATGAAATAGATATGAATAACTTTT
GTGGTACTTTTTTCACAGTTGACATCCACCTTTTTAAGTGTTGTGTGACC
AGTGTGATTTTGTTTGCCTAATAAGAGGAGAGGGTCAAAATATGAAATTT
GCTACAGTATGTGCCCAATGAACATAATTCTCAGCTACCTCAACCATATC
TGCAACCACAGTCGGAGGCAACCCGAAGGCTCCTCTTTCAATAGCTATCT
AACCAAAGGTGCCACTCTTTCTCCCTGGATTGCTCCACTTACCCTTGACC
ATTCTCTTAATTGCTGAGCATCAAGCAGAGGGACAGACATAAGTATCATT
TTGAAAATTTTTGGTATGACCGGCTGAGGGCCGAACCCACAACCTTGAAC
ACCATAGTAGGATGCTCTACCGCTGCACTACGGTCGCTATATCTATACAT
GAATCGATGTAAATTTTTTGAGATTTCAAGTTTGGACTAGGAGAATTCCA
TAAACATAATGTATTTTAGCTCTGTATCCTTTGTTGTAGACAGAGGCTTA
TTCTATCAATTTTTCCCTAGAAACCGCCACAACTGGTATGGAGACGACAT
TGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACTGTTGGT
AAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAATGAGAA
AATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATGACGACT
TGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGGTATTTGAAC
TTTTCTTCCATTCCATAATAAATTTCAAATTTCCAGCCTTCAACATGAAA
AAACTAACATGCATGTCACACTTCCCAAAATATTTCTTTATCCATATGAA
TTTCAAGTCCCCACCTTATGCATGAGAAAACAAACGTGAATGCTACACTT
CCCTAAAACATATTCAAATTCCCTATAGTATAGATATTATTAAGATTTTA
AGAACTTGGGGTTGGTTGTGCATTCGTGCTTGTAGCTTTATTATTTTGTA
TCTTTCATCTTTCGTAGAATGTCTGCACTCGATGTAACAGCTAAAATGTT
ATTCGACCGACCCATCTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGC
TTTACAAAGCACATCAAACAACCAAAATTCCTGAAGATTTGATCATCCCT
TCCTCTCAAGAAGACGAAGAAGTCCAACTCGAGGATCCTACAGAAATTTT
ACGCGAGGCTGACGAAAACGCTACTAATCTACCGGAACTTACAGTCGAGA
ATACAGATATCCAAGAGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGA
TTCGAACCACCGATAGACGATATACCTCCTCCTATGGACATTGATATGGA
AAACCCAGACCAAGAGAACGATATAACCGTCCCACCACCCTTCCAACTTG
ACGTGACCGAGAAAACCATAAACGAAACGGTGAACGAGAGCAGCGCAAAG
GAGACTGAAGACGAAGAGCCGGAAGCTGAGAAAACTGATCAACAAGATAA
ACGGTGGACCAAACGTACACAACAGACTCTCAATTTATTAGAAAAAACAT
TGAAAAAGAAATCAGCTCCAGTAAATTTTAAAGACTTGACTAAGAAATAT
AATCGTAAACAAGCGACACATAGGTTTTACACATTATTAACTCTCAGTAA
AGAGAAATGTATTACAGTTGAACAAGATGGTTTGTTTGCTGATATTTTGA
TCCACCCTGGGGAGAGATTCAATTCATATTCCTAAAACTGTTTTAAAAAC
CATGCCGGATTATATTTTATGATGGCAGTTCTTTTAACTTATTGGTGTAC
ATATACCGAACGACCAACCCGGTTTAACCTGAAAATCCTACCGGCCTTAT
GCTTGACAATATACACCCGCGAGAAAACAACAATCGTACTAATTTGCTGC
AAAAAAACGATTTACAAGATATATTATGATGATATTTTATTGATTTTAAC
CATGTTCAAATTTTTTTTTCACAATTCATCAAACTCTAAATTTTTTCATC
TCTATTTTCATATATACCACCATCTCTAACTCTAACGATTATAATATTTT
ATCAAAAAAGTTTTTAGAATCCTAATATTTTGAACATTATTATATTTCTG
TGATAAGAATAAGACACAGGCAGAAGGAATATTCCAAATCAATCAGGAAA
GTAAGGGGCTTATAAACTCCTTATTTTGACCTTGATTTCATAGTTAGGCT
TAGGCGTATTTTATGTTAATTATTTTGTTTTATAATTTTCGTTCTTAGAA
ATTTTCCCTTTTATATTGTTTATTTTTTATTTTTTCTGGTATGTTATGTA
GCAGGCAAGTTTGTGAAAAGGTCTGCTAACTAAATGCTTAGGAAAGTTTG
CATTAAATCAATTGACAATACATTACAGCCTGAATGTCTCGCAGAATCTT
GAACTTCTAATTCATGAAGAAGGAATGTTTCGGCTTTTGGGAATGGCTTG
GCTTCGCCGTAATTGATAAAAGTTTACTGCACAGTAAATATTATATTAAT
ATGTCATTCAAGGATCCTCTGCGAATCACTTTTCATAATAAATTTAGGTT
TTGTACTAGTTGAGCATTCTAAAGAGTAAGTATCCAGTCCTTTCATCAAG
TCTGTGTTTTTATTGTAGAGAATTTTTTAATGTTTAAATGCGTTTTAGCC
TGTATCAGTTTTTTGGTTTGTTTTCATTTTTGGTTACATTGTAAGTATTA
TTATCATTAGCATCAGCGATATTTTAAATCTTTCGATATTATTATTATAT
GAAAATAAAAAGAAACTTGTATTTTGTATTTGCTCACTACTTACTTGTAC
AGGGATATTAAACATTTTAAAAGAAAATTGAGTTGAAAAAAAA

Coding sequence (CDS) from alignment at sc0000261:371486..376978-

>TCONS_00017259 ID=TCONS_00017259|Name=TCONS_00017259|organism=Clytia hemisphaerica|type=CDS|length=11412bp|location=Sequence derived from alignment at sc0000261:371486..376978- (Clytia hemisphaerica)
AATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGACCGACCCATCT
CCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAAAGCACATCAA
ACAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTCAAGAAGACGA
AGAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAGGCTGACGAAA
ACGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGATATCCAAGAG
ACCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAACCACCGATAGA
CGATATACCTCCTCCTATGGACATTGATATGGAAAACCCAGACCAAGAGA
ACGATATAACCGTCCCACCACCCTTCCAACTTGACGTGACCGAGAAAACC
ATAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTGAAGACGAAGA
GCCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGGACCAAACGTA
CACAACAGACTCTCAATTTATTAGAAAAAACATTGAAAAAGAAATCAGCT
CCAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTAAACAAGCGAC
ACATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAATGTATTACAG
TTGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCCTGGGGAGAGA
TTCAATTCATATTCCTAAAAACCGCCACAACTGGTATGGAGACGACATTG
TTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACTGTTGGTAA
AGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAATGAGAAAA
TTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATGACGACTTG
GTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGAACTTGCATTAA
ATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAAGGGTTGGAT
TTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGATCTGGATAA
AGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATAAAGAAAAGG
AGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTTGCTGAAGCT
GTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCCTGAACCTGT
TTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTGATCAACCAA
CTGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCTTTGGAGAGA
CAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGATCACACTCTG
AACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGAAGATGAAAC
AGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTAACCTAGCAA
ATTTGACATCACAGTGACGCTCCAAAACAATCAATGTCGAGTTGAAGAAA
TCACAATGAAAGAAGATTTATTCTCATCAAGATGTTTTACGCAAATTTCG
TATTGGCCAAAAAGGGTCCACTTGCCAGAGTATGGTTAGCAGCGCATTGG
GAGAAGAAGTTAAGCAAGACACATGTTTTTGAAACTGACTTACAAAGCTC
TATTGAGAGCATTATATCACCAAAAGTGAAAATTGCCCTTAGGACTTCTG
GACATTTACTACTTGGCGTTGTACGCATATATTCACGAAAAGCTAAATAT
TTATTAGCTGACTGTACAGAGGCATTGATTAAAATTAAGATGGCTTTTAG
GCCTGATGTTGTTGATTTACCCATTGATAATCAAAAAGCTGCTGCCTCTG
CAATTACACTTCCAGAATTTCAAGAGTGGGACGCAATGGTCAACAATATG
GGAATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGACCGACCCAT
CTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAAAGCACATC
AAACAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTCAAGAAGAC
GAAGAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAGGCTGACGA
AAACGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGATATCCAAG
AGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAACCACCGATA
GACGATATACCTCCTCCTATGGACATTGATATGGAAAACCCAGACCAAGA
GAACGATATAACCGTCCCACCACCCTTCCAACTTGACGTGACCGAGAAAA
CCATAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTGAAGACGAA
GAGCCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGGACCAAACG
TACACAACAGACTCTCAATTTATTAGAAAAAACATTGAAAAAGAAATCAG
CTCCAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTAAACAAGCG
ACACATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAATGTATTAC
AGTTGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCCTGGGGAGA
GATTCAATTCATATTCCTAAAAACCGCCACAACTGGTATGGAGACGACAT
TGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACTGTTGGT
AAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAATGAGAA
AATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATGACGACT
TGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGAACTTGCATT
AAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAAGGGTTGG
ATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGATCTGGAT
AAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATAAAGAAAA
GGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTTGCTGAAG
CTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCCTGAACCT
GTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTGATCAACC
AACTGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCTTTGGAGA
GACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGATCACACTC
TGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGAAGATGAA
ACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTAACCTAGC
AAATTTGACATCACAGTGACGCTCCAAAACAATCAATGTCGAGTTGAAGA
AATCACAATGAAAGAAGATTTATTCTCATCAAGATGTTTTACGCAAATTT
CGTATTGGCCAAAAAGGGTCCACTTGCCAGAGTATGGTTAGCAGCGCATT
GGGAGAAGAAGTTAAGCAAGACACATGTTTTTGAAACTGACTTACAAAGC
TCTATTGAGAGCATTATATCACCAAAAGTGAAAATTGCCCTTAGGACTTC
TGGACATTTACTACTTGGCGTTGTACGCATATATTCACGAAAAGCTAAAT
ATTTATTAGCTGACTGTACAGAGGCATTGATTAAAATTAAGATGGCTTTT
AGGCCTGATGTTGTTGATTTACCCATTGATAATCAAAAAGCTGCTGCCTC
TGCAATTACACTTCCAGAATTTCAAGAGTGGGACGCAATGGTCAACAATA
TGGGAATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGACCGACCC
ATCTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAAAGCACA
TCAAACAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTCAAGAAG
ACGAAGAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAGGCTGAC
GAAAACGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGATATCCA
AGAGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAACCACCGA
TAGACGATATACCTCCTCCTATGGACATTGATATGGAAAACCCAGACCAA
GAGAACGATATAACCGTCCCACCACCCTTCCAACTTGACGTGACCGAGAA
AACCATAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTGAAGACG
AAGAGCCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGGACCAAA
CGTACACAACAGACTCTCAATTTATTAGAAAAAACATTGAAAAAGAAATC
AGCTCCAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTAAACAAG
CGACACATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAATGTATT
ACAGTTGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCCTGGGGA
GAGATTCAATTCATATTCCTAAAAACCGCCACAACTGGTATGGAGACGAC
ATTGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACTGTTG
GTAAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAATGAG
AAAATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATGACGA
CTTGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGAACTTGCA
TTAAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAAGGGTT
GGATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGATCTGG
ATAAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATAAAGAA
AAGGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTTGCTGA
AGCTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCCTGAAC
CTGTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTGATCAA
CCAACTGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCTTTGGA
GAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGATCACAC
TCTGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGAAGATG
AAACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTAACCTA
GCAAATTTGACATCACAGTGACGCTCCAAAACAATCAATGTCGAGTTGAA
GAAATCACAATGAAAGAAGATTTATTCTCATCAAGATGTTTTACGCAAAT
TTCGTATTGGCCAAAAAGGGTCCACTTGCCAGAGTATGGTTAGCAGCGCA
TTGGGAGAAGAAGTTAAGCAAGACACATGTTTTTGAAACTGACTTACAAA
GCTCTATTGAGAGCATTATATCACCAAAAGTGAAAATTGCCCTTAGGACT
TCTGGACATTTACTACTTGGCGTTGTACGCATATATTCACGAAAAGCTAA
ATATTTATTAGCTGACTGTACAGAGGCATTGATTAAAATTAAGATGGCTT
TTAGGCCTGATGTTGTTGATTTACCCATTGATAATCAAAAAGCTGCTGCC
TCTGCAATTACACTTCCAGAATTTCAAGAGTGGGACGCAATGGTCAACAA
TATGGGAATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGACCGAC
CCATCTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAAAGCA
CATCAAACAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTCAAGA
AGACGAAGAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAGGCTG
ACGAAAACGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGATATC
CAAGAGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAACCACC
GATAGACGATATACCTCCTCCTATGGACATTGATATGGAAAACCCAGACC
AAGAGAACGATATAACCGTCCCACCACCCTTCCAACTTGACGTGACCGAG
AAAACCATAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTGAAGA
CGAAGAGCCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGGACCA
AACGTACACAACAGACTCTCAATTTATTAGAAAAAACATTGAAAAAGAAA
TCAGCTCCAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTAAACA
AGCGACACATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAATGTA
TTACAGTTGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCCTGGG
GAGAGATTCAATTCATATTCCTAAAAACCGCCACAACTGGTATGGAGACG
ACATTGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACTGT
TGGTAAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAATG
AGAAAATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATGAC
GACTTGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGAACTTG
CATTAAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAAGGG
TTGGATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGATCT
GGATAAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATAAAG
AAAAGGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTTGCT
GAAGCTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCCTGA
ACCTGTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTGATC
AACCAACTGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCTTTG
GAGAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGATCAC
ACTCTGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGAAGA
TGAAACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTAACC
TAGCAAATTTGACATCACAGTGACGCTCCAAAACAATCAATGTCGAGTTG
AAGAAATCACAATGAAAGAAGATTTATTCTCATCAAGATGTTTTACGCAA
ATTTCGTATTGGCCAAAAAGGGTCCACTTGCCAGAGTATGGTTAGCAGCG
CATTGGGAGAAGAAGTTAAGCAAGACACATGTTTTTGAAACTGACTTACA
AAGCTCTATTGAGAGCATTATATCACCAAAAGTGAAAATTGCCCTTAGGA
CTTCTGGACATTTACTACTTGGCGTTGTACGCATATATTCACGAAAAGCT
AAATATTTATTAGCTGACTGTACAGAGGCATTGATTAAAATTAAGATGGC
TTTTAGGCCTGATGTTGTTGATTTACCCATTGATAATCAAAAAGCTGCTG
CCTCTGCAATTACACTTCCAGAATTTCAAGAGTGGGACGCAATGGTCAAC
AATATGGGAATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGACCG
ACCCATCTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAAAG
CACATCAAACAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTCAA
GAAGACGAAGAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAGGC
TGACGAAAACGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGATA
TCCAAGAGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAACCA
CCGATAGACGATATACCTCCTCCTATGGACATTGATATGGAAAACCCAGA
CCAAGAGAACGATATAACCGTCCCACCACCCTTCCAACTTGACGTGACCG
AGAAAACCATAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTGAA
GACGAAGAGCCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGGAC
CAAACGTACACAACAGACTCTCAATTTATTAGAAAAAACATTGAAAAAGA
AATCAGCTCCAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTAAA
CAAGCGACACATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAATG
TATTACAGTTGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCCTG
GGGAGAGATTCAATTCATATTCCTAAAAACCGCCACAACTGGTATGGAGA
CGACATTGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGACT
GTTGGTAAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGACAA
TGAGAAAATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTATG
ACGACTTGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGAACT
TGCATTAAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGAAG
GGTTGGATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAGAT
CTGGATAAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGATAA
AGAAAAGGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGTTG
CTGAAGCTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACCCT
GAACCTGTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCTGA
TCAACCAACTGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCCTT
TGGAGAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGATC
ACACTCTGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAGAA
GATGAAACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGTAA
CCTAGCAAATTTGACATCACAGTGACGCTCCAAAACAATCAATGTCGAGT
TGAAGAAATCACAATGAAAGAAGATTTATTCTCATCAAGATGTTTTACGC
AAATTTCGTATTGGCCAAAAAGGGTCCACTTGCCAGAGTATGGTTAGCAG
CGCATTGGGAGAAGAAGTTAAGCAAGACACATGTTTTTGAAACTGACTTA
CAAAGCTCTATTGAGAGCATTATATCACCAAAAGTGAAAATTGCCCTTAG
GACTTCTGGACATTTACTACTTGGCGTTGTACGCATATATTCACGAAAAG
CTAAATATTTATTAGCTGACTGTACAGAGGCATTGATTAAAATTAAGATG
GCTTTTAGGCCTGATGTTGTTGATTTACCCATTGATAATCAAAAAGCTGC
TGCCTCTGCAATTACACTTCCAGAATTTCAAGAGTGGGACGCAATGGTCA
ACAATATGGGAATGTCTGCACTCGATGTAACAGCTAAAATGTTATTCGAC
CGACCCATCTCCTTCAAGAGCAAAAAAGCAAGACTAGAAGAGCTTTACAA
AGCACATCAAACAACCAAAATTCCTGAAGATTTGATCATCCCTTCCTCTC
AAGAAGACGAAGAAGTCCAACTCGAGGATCCTACAGAAATTTTACGCGAG
GCTGACGAAAACGCTACTAATCTACCGGAACTTACAGTCGAGAATACAGA
TATCCAAGAGACCATCCTCCCAGAGGAACAAGAAGAAGAGAGATTCGAAC
CACCGATAGACGATATACCTCCTCCTATGGACATTGATATGGAAAACCCA
GACCAAGAGAACGATATAACCGTCCCACCACCCTTCCAACTTGACGTGAC
CGAGAAAACCATAAACGAAACGGTGAACGAGAGCAGCGCAAAGGAGACTG
AAGACGAAGAGCCGGAAGCTGAGAAAACTGATCAACAAGATAAACGGTGG
ACCAAACGTACACAACAGACTCTCAATTTATTAGAAAAAACATTGAAAAA
GAAATCAGCTCCAGTAAATTTTAAAGACTTGACTAAGAAATATAATCGTA
AACAAGCGACACATAGGTTTTACACATTATTAACTCTCAGTAAAGAGAAA
TGTATTACAGTTGAACAAGATGGTTTGTTTGCTGATATTTTGATCCACCC
TGGGGAGAGATTCAATTCATATTCCTAAAAACCGCCACAACTGGTATGGA
GACGACATTGTTCTACACTGAAGCCGTTGCATTGGAACCAGTGGAAGTGA
CTGTTGGTAAAGAGAAAAGAAAGAAGAGGAAAAGAAAGCTTGTTGTGGAC
AATGAGAAAATTATACAAAGAGATCAAATGAAGAAACAGATTGAGAGTTA
TGACGACTTGGTGAAGGCAGCTGTTGTGGCTCCACCCACACGATGGAGAA
CTTGCATTAAATGATCCAATGATGGAGGATGTTGGATTCGGAGCAGGTGA
AGGGTTGGATTTTCTTGAAGATTTTGGTGAGGTAAACGGTCTTGATGAAG
ATCTGGATAAAGTAGCTCCCATTGAAGATCTAGACGAAACTTTGAAAGAT
AAAGAAAAGGAGAAAGAAAGAGAGGATCAGGAAGCTGCTGATCGATCAGT
TGCTGAAGCTGTGGCTGAACTAACTGGTGAAAAGGAGACAGTTGTTGACC
CTGAACCTGTTTTAGATGAAGATGATGTGGATAATGAAGCAATTGTTCCT
GATCAACCAACTGGTATCTGTCAAATGATAATTTCTTTGGTGATGTGCCC
TTTGGAGAGACAAGTGATGGGGAAATTATGCGTGATGAAGTCACAATGGA
TCACACTCTGAACAATTTGACGGCAGATGTCTCAAAAACACACCTTGAAG
AAGATGAAACAGGACTCAAAGATAAATCATCCTTGTCATTGAACCAAAGT
AACCTAGCAAATTTGACATCACAGTGACGCTCCAAAACAATCAATGTCGA
GTTGAAGAAATCACAATGAAAGAAGATTTATTCTCATCAAGATGTTTTAC
GCAAATTTCGTATTGGCCAAAAAGGGTCCACTTGCCAGAGTATGGTTAGC
AGCGCATTGGGAGAAGAAGTTAAGCAAGACACATGTTTTTGAAACTGACT
TACAAAGCTCTATTGAGAGCATTATATCACCAAAAGTGAAAATTGCCCTT
AGGACTTCTGGACATTTACTACTTGGCGTTGTACGCATATATTCACGAAA
AGCTAAATATTTATTAGCTGACTGTACAGAGGCATTGATTAAAATTAAGA
TGGCTTTTAGGCCTGATGTTGTTGATTTACCCATTGATAATCAAAAAGCT
GCTGCCTCTGCAATTACACTTCCAGAATTTCAAGAGTGGGACGCAATGGT
CAACAATATGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009656XLOC_009656Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017259-proteinTCONS_00017259-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017259-exon-sc0000261-1575043694:376393..376978TCONS_00017259-exon-sc0000261-1575043694:376393..376978Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1575043694:375605..375688TCONS_00017259-exon-sc0000261-1575043694:375605..375688Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1575043694:375023..375216TCONS_00017259-exon-sc0000261-1575043694:375023..375216Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1575043694:374467..374781TCONS_00017259-exon-sc0000261-1575043694:374467..374781Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1575043694:373589..373808TCONS_00017259-exon-sc0000261-1575043694:373589..373808Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1575043694:371486..373311TCONS_00017259-exon-sc0000261-1575043694:371486..373311Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1510915933:376393..376978TCONS_00017259-exon-sc0000261-1510915933:376393..376978Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1510915933:375605..375688TCONS_00017259-exon-sc0000261-1510915933:375605..375688Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1510915933:375023..375216TCONS_00017259-exon-sc0000261-1510915933:375023..375216Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1510915933:374467..374781TCONS_00017259-exon-sc0000261-1510915933:374467..374781Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1510915933:373589..373808TCONS_00017259-exon-sc0000261-1510915933:373589..373808Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1510915933:371486..373311TCONS_00017259-exon-sc0000261-1510915933:371486..373311Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1491911889:376393..376978TCONS_00017259-exon-sc0000261-1491911889:376393..376978Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1491911889:375605..375688TCONS_00017259-exon-sc0000261-1491911889:375605..375688Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1491911889:375023..375216TCONS_00017259-exon-sc0000261-1491911889:375023..375216Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1491911889:374467..374781TCONS_00017259-exon-sc0000261-1491911889:374467..374781Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1491911889:373589..373808TCONS_00017259-exon-sc0000261-1491911889:373589..373808Clytia hemisphaericaexon
TCONS_00017259-exon-sc0000261-1491911889:371486..373311TCONS_00017259-exon-sc0000261-1491911889:371486..373311Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:371486..376978 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.63323	6.12402	33.3554	51.6805	148.549	111.947	48.3717	51.787	27.2152	33.8704	25.2319	17.6953	13.6914	12.9719	15.5597	19.1238	35.7881	31.8191	7.27694	8.00568	20.3363	20.1115	13.5074	15.4658	33.2159	37.2865	11.5274	7.65509	10.0939	11.2157
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006910Rad21_Rec8_N
IPR006909Rad21/Rec8_C_eu
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0000228nuclear chromosome
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0000228 nuclear chromosome
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00017259 vs. Swiss-Prot (Human)
Match: RAD21 (Double-strand-break repair protein rad21 homolog OS=Homo sapiens GN=RAD21 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.895e-62
Identity = 114/177 (64.41%), Postives = 141/177 (79.66%), Query Frame = 3 
Query:  216 MFYANFVLAKKGPLARVWLAAHWEKKLSKTHVFETDLQSSIESIISPKVKIALRTSGHLLLGVVRIYSRKAKYLLADCTEALIKIKMAFRPDVVDLPIDNQKAAASAITLP-EFQEWDAMVNNMGKFDITVTLQNNQCRVEEITMKEDLFSSRYLSNDNFFGDVPFGETSDGEIMRD 743
            MFYA+FVL+K+GPLA++WLAAHW+KKL+K HVFE +L+SS+ESIISPKVK+ALRTSGHLLLGVVRIY RKAKYLLADC EA IKIKMAFRP VVDLP +N++AA +AITLP EF ++D  + ++   D+      NQ RVEEITM+E++ +   L  +N FGD  FG   D EIMR+
Sbjct:    1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQPLPDLDDIDVAQQFSLNQSRVEEITMREEVGNISIL-QENDFGD--FG-MDDREIMRE 173
The following BLAST results are available for this feature:
BLAST of TCONS_00017259 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAD211.895e-6264.41Double-strand-break repair protein rad21 homolog O... [more]
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