TCONS_00017238 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017238
Unique NameTCONS_00017238
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017238 ID=TCONS_00017238|Name=TCONS_00017238|organism=Clytia hemisphaerica|type=transcript|length=1124bp
CGCATCGATAGCAGGCAATCAGTAGTCATCAAAGAAGCATTCTTACTTAT
TACATAAATTCAACTGCTGTTTAGACAAAGACTTGTCAGGATGAATGCTC
TGGCATTGTGTTGTCTATTATCAGTTGCTTTTGCAAAACCATCACAAAAT
GGTTTATACAACCCTTTGTTTCAAGATATCATTGATGAAGTCAATAGTAA
ACAAACAACATGGAAAGCCGGTCATAATTTTGATGCCAATGTTGACCATG
CTTATTTGAAGCATTTATGTGGAACTTTTCTTGATGACCCCATCAGAGAA
TCATTGCCAGAGAAACAAGATTTTGAAACAGTTGAGCTGCCAGATGAATT
TGACTCTCGTACAAAATGGGGAGAGATTTGTCCAAGCACAAAAGAAGTCC
GTGACCAAGGAAACTGTGGCAGCTGCTGGGCATTTGGTGCTGTAGAAGCT
TTTACTGATCGTATCTGTATTGCATCGAACGGTGAAAAGAAACCTCACAT
CTCTGCTGAAGATCTTCTTTCTTGTTGTGGTTTCTGGTGTGGAATGGGTT
GCAATGGAGGTTTCCTCGGAGGTGCCtggaactttttcaaaagaactgGA
TGTGTTACCGGTGGACAATACAGTACCAAGGAAGGCTGTAGACCATACAG
CATCCCAGCCTGTGAACACCACACTACTGGACACTTGAAACCATGCTCTG
GAGATTCTCATACaccaagctgtgagaaagaatGCAGACAAGGCTACAAT
GTCAGCTACACTGAAGACAGACATTACGTTAAAACCAAATACACTGTTTC
AAGCGACCAAACTAAAATCATGACAGACATTATGACCAATGGACCAGTTG
AAGGAGCTTTCACTGTCTATGCTGACTTCCCCAACTACAAATCAGGTGTT
TATCAACACACCACTGGATCACAACTTGGTGGTCATGCCATCAAAATCCT
TGGATGGGGTACTGAGAGCGGAACACCTTACTGGTTGGTTGCCAACTCAT
GGAATCCAGACTGGGGAAACAAAGGGTTTTTCAAGATTAAACGTGGAGGA
AATGAATGTGGCATCGAATCCTCAATCACTGCTGGAATCCCTGcataaat
ttaaaatgaaaatgatttgttttt
Run BLAST on NCBI

protein sequence of TCONS_00017238-protein

>TCONS_00017238-protein ID=TCONS_00017238-protein|Name=TCONS_00017238-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MNALALCCLLSVAFAKPSQNGLYNPLFQDIIDEVNSKQTTWKAGHNFDAN
VDHAYLKHLCGTFLDDPIRESLPEKQDFETVELPDEFDSRTKWGEICPST
KEVRDQGNCGSCWAFGAVEAFTDRICIASNGEKKPHISAEDLLSCCGFWC
GMGCNGGFLGGAWNFFKRTGCVTGGQYSTKEGCRPYSIPACEHHTTGHLK
PCSGDSHTPSCEKECRQGYNVSYTEDRHYVKTKYTVSSDQTKIMTDIMTN
GPVEGAFTVYADFPNYKSGVYQHTTGSQLGGHAIKILGWGTESGTPYWLV
ANSWNPDWGNKGFFKIKRGGNECGIESSITAGIPA
Run BLAST on NCBI

transcript from alignment at sc0000261:256535..272785+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017238 ID=TCONS_00017238|Name=TCONS_00017238|organism=Clytia hemisphaerica|type=transcript|length=16251bp|location=Sequence derived from alignment at sc0000261:256535..272785+ (Clytia hemisphaerica)
CGCATCGATAGCAGGCAATCAGTAGTCATCAAAGAAGCATTCTTACTTAT
TACATAAATTCAACTGCTGTTTAGACAAAGACTTGTCAGGTAAagctttt
cattaaatttgatgttatttaagattttttcatttccataagCCCTCCTA
GGCACACAAGcttggacattttcttttttgatgttgaTGTTTCTATACAT
TTTGgacatttccaaatgaattatttttgtgtcttctcacaaatccaaaa
atataATTAGAAGATTCAGGATAGGGGGGGTGCTTCAAAAAGGTACGGTC
AACAGCTCTAACCTGGGACTATCTggcaaaacatgggacggcaattcggg
gCGGCCACCATTATTTCACCACCAACGACcacaaacctccaaagtcaatT
AATTAACACAACCGCAAATCGTAGATAGCATATAATGTGAATACACTACA
CTCACCAGGTTTGCTTTCATACTGTAAAAGGAACAAATATTTGGGACGAG
TAGAAATGCGTGAATGTGATCGCGCGCATTCGcgcacaagtgttacgcgt
aagccaaatcgcgtattacgaacaacctctaaattgccgagtacaggaga
aaaaatcaaaattcaaaatggcggccaagcccacgctgataactatcaaa
aatctttgtttttcaatcagctaaattgcagctcaataaatcaatgaaat
aatttgaaataaaaagtaaacaaaccttgaacctttcatgaatccaaata
aataaaagtattcatctaaagtgaagattNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgccaac
taaaaatttctctgcggggtcactggcaaggagttacgacttcagactta
agattccaattcttgtgtaggctgcaactacactgccaattgatctgtat
tacaaatacttccaaatgggtccataagttaagaaaatgaaattatcatc
tagcacgggggttttgtttttaaaaacaaacttcaaaataaaattgttaa
tgaacttgttacttaaaaaatatcacttacttacataatttatttatggt
ataacacccctttcttaaataaatggcctcttaaagtcttttatgtttgc
cgcaagaagggagaaaaatttaatttgacccccggttttttctctctttt
tctaacTACCGTAGGTCGGGGAAACTTCGGAATGAAGGAAACTTCGGACT
AAAATCTTTAACAAGTGATTACTTCGCGAGGATGTAACATTTTATcgtac
ttttttctttcacagtTCAGAAATGAAGCACACTCGACGATACATATCAA
GCGACGGAAAGCCgaaagaaaaacgaagaagaaattgaagaaaaccaCGA
TATTTTACCATCTTCCATTGTAAAGAGATTTGTTGGATATCTAAAGCGGC
AACCTCATAATTTTATTTACGTGATGAAAAGAGGAGACATTGAATGTAAC
GTTAAAAGTTATTTGGGCTAAAAATATGCATTCCTTAATCTTCAATAGCT
CTTCAAAGTTGCTCTATAAATTCGCCGAGAAAGTCGCTGCGAGAATAGCT
TTACCGTCAGCCGAGAAAGATCTTCTTTAAACGAATCCCAAGAGAAACAT
AATGTGATTTCGAAGCAATATTATAAGAACTTTGTTCTGACGTCACCAGA
CATTGATGATAAACGTGCAGATAATTTGGTTCTTTATTAGTATAAAGTAA
GGTAAagggaaaaccctttttttattagaagtcGATGATGGTGGATTTTC
TTCATTAGAACATTAGAGTATGTCAAATAATTCTTGGAAAAAGCTTGCTT
GTAAGTCGCTATCTGATCCACATAATACGTTGGATGCAAATTCTAATGAT
TTAAATCTAAGATTATCATAACTAATTAAAGAGCCTCCGGTACACTTGAA
GACGCATTTGTCATACCCTTTCCATGGTGGTATGACATACAGTAGTGCAT
Gtattttaggcgtacaaactttcgcgagcagaaactttcgcgaatcgttg
gatataaatgaaaacttttgaatgaaaattgctttaaaatggaaaaatat
acCTTAAATCCGATAAAGACTGTTGCTCTTCGACTATAAAAGGTATTAAA
CTATAAAATTatgccaaaaatttcaaatttgacgATTCGTGAAAGTTTGT
TGTAAACTTTGCGCTATTTCGGCCTCGCAAAACTTTGTGCTCGTTTGTAC
GCTTAAAGTGATCAGTGATTTGGCCAGATCCAGGTGCCTAATTTCTCCAA
AATAAATATAATCTTTTTATTGCGGCTTTGACGTGAAAACTACCCCTAAG
TTATTATCATTCAGCCCCTTAACGATAGCTAAAATAGGTTAAACACTTTT
ATCATTTCGGTAGTCATAACAGGGGTGTTTCCACTTAAACATTTTGTATT
GAATGGTTGTGATAGAACCTGTTTACCTGTTCCTTCTTTGCCTAATGGTA
ATGAATGTGTCCCCGGTGAAAAAAATACTGCAAATTGATAATCGAAATAT
CATTAGCAAAAAGGCTGCTTTGGTGATATGACAGCCGATGGTTCTTACAG
CTGGCTTACAAATCATTTTGACTCAAGAAACCTCTGTATCTATCACTATG
TTACTGGAGGGTTATAGGTGGTTTTAGACCATatcgaacttatcagagga
accagatatttgtaattgtaaattcattgtcttttaacgagcgttgcact
ccttcgtaTGCTTCCGacatacttgctctattgtcttaaatgcGCAAGTG
GGTGTATATAGTCGATATATTTTGGCTGTATTAACAAACTAAATTTCGTA
ATCGTAACATTTAAcctttaactcaaatcaaaagaCGATAAGTTCGAAAA
TTTCAAACCCGTCAAATGGTATGTgcttattacacccctgtgtcacagat
cctccagccccactggaaaatttggcaaaaataataatggaaatttttat
cccctctgttggaaaaaaatccaccgGGGCCActgtgagataggggtgtc
TTATTTAAAATAAGGTAAGACATATACAGCGGTAATGAAGCAAAATTACG
TACAATATTATGTTTCTAGTCTACCATTGAAGCTCTTACTTACTCGGTag
gtattttgtatttatttcttttcatctCTTTTTAATCTAATCTATAAAGC
CTGCATCGACGAACTTATGAACCGCCCGTAGTCCCACTGGTAACAAAACA
TTTAATTAGTATTTAATTCGTGATTTACAGTACGCATTTCGTTGCAAGCC
TTGTGTAGTATATTGGGTTACTTTTAACCACGATCTTGATCGCGCTAACT
TCCTCGCACGTCCACCTGGTCCATCGTCGAACAATTatctaaatcaaaat
tgtaGTCTACTGTTGAAtagaaagtcaattttctatCTCTTGATAAATTG
GAAACCTCATCAAAGCCTGGGATTTATTATTCCACTGGCTGTGTAGAAAA
AAGCAGTGGCCTCCTAGTATAGTCAAGTTGAATATGAAAGTCAACAGTGA
CTTAAGTTATTTAAAGCGATATTTTTGGCAAACATTAAATTTCACTTGAC
TTGTATAAAAAACACCCATTTGTCCACAGCGATGGCTTTATGCTGCTTTG
ATTCCGATTTCACTGAAACTACTAAAGTGCATGTATACGTAATACGGGAA
TGTATACAGGAATCAAAACTAAATTCCCATATtgcgaaaaataaaacttg
aaacagAACATGAACATttagctctctcgcttatatCTCTATAACACCCA
TGTTTCACACAGCCCCGGTGGATCTTCACTCAAAACAACACATAAACAAG
ACGAcatgaagtcgaaaatttcgcctagaatttgaaccgcatgggaaaaa
gaagaagtagagattaaagctaatctgaaatctactttacatcgagcctt
gatgaaacaattttacaagaacaaggaggcttaaaatcgctaaaaaaata
agaccaatttaagaacaattgctgtttaatttttaagaactcttacaaag
tatatgcttataaaaaataaatatgctcacattgtgcgccgtcccttgtt
tactctgtaagaactaattaccgaaagatatatcaccgtctatcatgagt
tattgagttaattcttataaagtatatgcttacaagaaaagtaaaaatac
tCATACTttacgccatcccttgtttactttgtaagaactaattaccgaac
gGTAtctcaccgtctatcaagagttattgagttgattcttataaagtata
tgcttacaagaaaagtaaaaatactCATACTttacgccatcccttgttta
ctttgtaagaactaattaccgaaagatatatcaccgtctatcatgagtta
ttgagttgattcttataaagtatatgcttataagaaaaataaatatgctc
atattatttgctgtcccttgtttactttgtaagaactaattaccgaaagg
tatatcaccgtctatcatgagttattgagttgattcttataaagtatatg
cttataagaaaaataaatatgctcatattgttTGCTGTCCCTtgtttact
ttgtaagaactaattatcgaaaggtatatcaccgtctatcatgagttatt
gagttgattcttataaagtatatgcttataagaaaaaaaataaaaaaaca
atcagTTATATGCTTAAATTTGTGGAATTAATATTCGAGCAAAAAAAACG
CGACTTATGATTATCTCCATAGTATATACTGAACCAACTAACAAGAGAAC
GCCCGGGTCAAACGCCAACGCCATAATCTTCGCCCCAAAAAAATTCTCCc
ccgccgccgccgcagaaaggctatcgtaatactttcgctaagcgaaatta
aaaatagggttgaaatttttatcaaaatttgttgGGGATCGTTTTGAAGt
gcttttttcaatttcctaatgaggttgaaattgaaaagatgTTTCCCCAC
CGGGTGCGAAATCTCGGTCCAATTTTTCAAGTGGAGCGGGATTCGACACA
AGGGTGTTTTAAAAAGACCGTTGttactttatttgaaagtcgGAAAAGTT
TATGGGCTTCCGAAAAAAATAATACTCAGAACTTAGCATCCAAAAGTCCc
gcgaaaaataagaaaaatatctaaTGAAATATAACGATATGATAGTATCA
TAAGGAAACGAGACAGTCTAATtgaaaaagttcttataaaacgtGTTTGT
TTCACCAATTCACTCTGAGGAAGACCCTCTCATCATGTGTTTAGCGTCCA
TAAAAACTAATGATTGGTTGATTAGTTTTATTATTCACACTTCCATCGCA
CGCCCAGAAaattaatgaccaattaagcgcAATTCGTATCTTTCTGTCGT
TAATTTCTCGGCTCACACGAATTTGTCTCTtggtatttttcaacaaatgg
cacttcaaattcaatgtttttgttttgaaatagcGCAGTATCCAGTCATG
ATGGTAGATCGTTGGAGTGACGGCAAATCATTCCGAAGTTTAACATTTTA
AGAAGTTGACCTTTCTGAAATTGAGATGGTGTTTCTTTCATAATGACCTG
GCTGATTTACTTGTaacgattgttttctgaaagacAATAACACAAATGTT
ATGTACAGTAAGTTTGGTTGATCTTTTTTTCATATTCCaggagaaataaa
gaaaaaacttgaaaatctgtCCGAAGTTTCCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNttcccgcgtgttagtgtagacacaac
tttaatctggggaaatgaagcgttttcattggtctaaaatcacggatgat
cacgtgaccagaatttttatccagggaaatgccgtggcggcaatgtttta
ctttagtgagattgaccattttgttgttttgatttgagcgggcgaaattt
ctgtacaaaccaaaatatggcttcgttggaataccggttaaAACACTTGT
GAAGCAAGCAAGCATCCAAACACAGACAGTCTGTGTCACAGATATCAAAA
GAAGTCTGTTCTTCCGCAGAAAATTGTGAGATCTGCTATCGACACTCTGT
CACTTTGACATGTCAATCAATCGCACACGCTGGAAAAAAGTctctagaga
aaaacaacacaaaacaaaaaatgtttgataTTTGCTatttccagacggtg
tcaatcgaacgaatcgaatgccgaatcaattgaacgcaattgaaaaCAAT
CTAATAATTGCAATacgattgtcaaacgcaatcaaatcgcaatcgaatat
tacccaggatttgccgttcgattgcttcaatTATGTTTGATTGTATTCAA
TTACGTTCAATATtacgttcaattgattcaattgtattagattttattcg
ctttgtcAGGCTAGCTCtgaagctctaaaacagcatctaataacttgaaa
accagaatatgattcttcaatcaGTGAGggtggaacttcgatttttgagg
attacgattttactagttttttagcgatttttgcctcgctaacccaaatc
tcgcaacctctttaccttaaggaagatcgaaattcgaacgcatagcagaa
atttgttcatcttcacaggatcgattctcaacaacaaaatacatcttttg
gtctttgggtttgtttctgacatttttccttcaaagaatatcgatcactt
tcctttttccCTTGAGCGCGCTAGAAAAAATGATAAGCTCGCGTTTTCGC
GCGgtcgaataaagatgaggcggcaatcttgcactgagggtgctacttag
tttccgccctattttgcgcccacgataaaatggtccaaacacggggctat
tccaaatgataaactatgtcgttatgtaagtgtttattttctgagagata
caaatagtatattgaatattattaacttatttatttatttatttatttat
ttaagtatttttgagcgcaaatttaaatataggTTGAATATTacgtttat
tcctcaaaccccccggaaaagtttttttgctgacttagctattttacaaa
tctcaaaaaagaactcccataggaatttcAATACCTTaccccgattggtt
aattttggaACGGCTTGAAGAAAGTATAATGGCAGATGATtggataattt
taaaagtttctgaggaaatgtgtgtaatttatcgatgttgatggcttgtt
gattcttaaaGAAAGTAGAtgacaggtatagctttttctaatcctggaat
atcgaggttccagctacactgtcaatgggaatcaaaactataaagtgcac
ttaccaacatcaatttgtcagatctaacaaaattaataaccgcactatca
tcattgacaataaaacaaaccaatttTCTGTCAacagccttgtaaacatt
ccaacaacttccagcgaaatgatctatcacagtttagtctaccattttta
gtgcggtccgaggattgagctgagaacgcctgcgcgggtgaaaaacttca
atctgtcaatcattttctcaagcaaagagttcgcggagcgattctagctt
taccaTAGTGCCgtggatcatcaatggatagtattcaatcatcattatcc
ctttattttcattcctagaacttttgcaaaaaaaaaatgaaaaaaaaaat
agaaaagttgtattttttactgctctattcacatactgaatttgaaaaat
cttctatgtggcgtttttttgcagatgctaatcaaaaatagtgtgacatt
gtaaaaaatgctcaaaatcaactttttggaaTAACTCTTCATATTTTTTG
AGTCAGCCATAGAGATTTCACAGGGTAATAGACCTCAACGTGGagatatg
attaaaaaaaaaattttgttatttgagTCAAAATTGTGGCTGCAGATAAa
aaattctagtttttttttaaagtgtaaGCCACACGATATTGAAAAGTGAT
CTCTGAATGGGACCTTCTAGACTTGAAAGAAGAAAGgctgaattttccaa
aaagtgttaAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCCACAAaatttcgtt
ctttttgcaaCAGGTAGATAAATTATTCAGCTTAACCATGGATGTATTTT
GACATGTAAGCCACATGATGGCCTCATTCTATGAGTAAAATAGTGGATGA
Cataaaaaatgtcacaaaacaggggttaatttttgattagcatctgcaaa
cttcaaaaaactgatttttgtcccacctttgcaggactttggcttaagtg
cttgcgtgcagcataagGTACAAAGTCCAAGCATgcatttcccgtaattt
ttgtatgaagagttaggtctatactgtttgTACGGTACTTAGGCACTCAG
CCGCCCATACTCTagaaagctctaacagagtgaaaaactcatcaaacata
atcgtaatcgatcgaaatcgaagattaatcgaatgtaattgacaatcaat
cgaacatagtcaactatcaatgaACCAAtttaaccttactcgaacgcaat
caaatattacccagtgttaaaagttcttccgtctcagacggatttccgtc
tcagagAAGTATATAGAGAgacttttccgtctcaaaatcctgcataattc
accaaaagttcaagaatatgtgctaatttgctgtgtaaaatccattttcc
gtctcagacgaaaatcttgctttgaccactgattACCCAGGAATCTGCCG
tgcgattgagattcgattacaaTCTACAATCCAATCGCAATTATTCTATC
GCGTTCGATTAtgttcaattggttcgattgcaatttttgtttgaagttgt
tcaattgacaccgtctggatattTGATGTGATTAAATTGTGTATTTAGAT
TGTTAAAATTACTtcttcaaattatgtacttttaaaatgctttaaaaata
catttggttGTGATTATGGGATGGTAAAAGTTTAATTGATAAACTTGatt
gaagtatcaaaacaaatttgttaacACCCAGATGGGAGTTAATTTTTTAc
aacaaaacatcaaatcaaactttgaaaaagctTAAACCAAAGGTGCTACA
CTCCCGAGGGTAAACTAGTCAATTTCATAGAGGTAATGAGAAATGTACAG
ACAtcgaaaaaatataattcacAATGGCGTCtgaaattaaaactgaaaaa
agatgAGTATGATTACCATTGTACAGAAATACCTCCTTAGCCCCTGTTCC
GATTTTTCAGGTTATAATTTTTGGATTTGTGAGAAGACATATATTATTTT
AAACCCCATCTGGGTGTTCctaaagggctacttagactacacaatatatt
gacaaaCAATATTTCACAATATAGTTTTCAGATCGTAATGTACGGAGTAA
AGAACAGGTGctttattataaaaagaaatttatattgttggaatattgca
aattgaGATAACTTGCAGATACCTTATCAATATATTTCTAacactcagca
atatatcatcaatatattgcctgacaatatattgtgtagtgtatgtagcc
cttaaaaGGTAGGGTACCCCAATGGGGCCCTTAATTGAGCTACTTATTGG
GGTACCCCTTTTGCCCTAAATTTTACAAACTGCTGATGCTCGAGTTCATG
ATAAAATGATACTAAAACCCCTGTTTATTAAaacaattggcaaaaatcaa
GTAATTTTTTGAACTGTCATCTctgtttcaaaaagattcactactcaaaa
aagcaaaataaaataaaaaattcaaaattatgtCTGAAAGTATTTTAATT
CCATACTGCTATACTATAACTGTAATTGATATTTATTAGAAGCTAAATTC
TAATTATTAGCTGTTAAAAAGTGCTGTAATTTTTTGCAGGATGAATGCTC
TGGCATTGTGTTGTCTATTATCAGTTGCTTTTGCAAAACCATCACAAAAT
GGTTTATACAACCCTTTGTTTCAAGATATCATTGATGAAGTCAATAGTAA
ACAAACAACATGGAAAGCCGGTCATAATTTTGATGCCAATGTTGACCATG
CTTATTTGAAGCATTTATGTGGAACTTTTCTTGATGACCCCATCAGAGAA
TCATTGCCAGGTACACATGATTATCACTTGATCAatatttatcttttcaa
tatttatctTATACAagttttttctttgcttttacTTTGGAAGTTAAATA
ATATACTTTGAGTGTTGGATGACACATGTGACATTGACATGAGTTCTATA
AGACAAGAATTGATTGAGTTGATACGGTCTGAACACTCTTATATTTCATT
AGTGTCGTTTTTATTCTTCACTTTGGGCATTTTAAGAGAAGTCTCTAGGA
ACACTCTTCAGATAAAACATCTAAATATATTTTAGAGAATAGGGGATAAT
TATTCTTTCATGATATTTTATTTTAGAGAAACAAGATTTTGAAACAGTTG
AGCTGCCAGATGAATTTGACTCTCGTACAAAATGGGGAGAGATTTGTCCA
AGCACAAAAGAAGTCCGTGACCAAGGAAACTGTGGCAGCTGCTGGGTATG
TTGTTCaaagaatttaaaacaaaatctaaAGAGCACTGAAGGGATTATGC
CATTGGCCGAAAAAGGCTTTCACTATTTATGCTTCGTCATATGGGAAGTT
GTGTTTGAGGGCGTTGCAGTTGTGTCTATCGCTTTTGCCTAACCTCACAA
TTTATTCTAAAGATCTTAGGATTAGGAGTGtcttgtattttttataacAG
AGATGGCTAACTAATTCATTCCTTGAGCTGATTTTTTGTACCTagcaaaa
ttttatatattttttcacaaCAGGCATTTGGTGCTGTAGAAGCTTTTACT
GATCGTATCTGTATTGCATCGAACGGTGAAAAGAAACCTCACATCTCTGC
TGAAGATCTTCTTTCTTGTTGTGGTTTCTGGTGTGGAATGGGTTGCAATG
GAGGTTTCCTCGGAGGTGCCtggaactttttcaaaagaactgGATGTGTT
ACCGGTGGACAATACAGTACCAAGGAAGGCTGTAGACCATACAGCATCCC
AGCCTGTGAACACCACACTACTGGACACTTGAAACCATGCTCTGGAGATT
CTCATACaccaagctgtgagaaagaatGCAGACAAGGTTTGATCTATTTT
CATCATGTGGAAAGATTATTTATCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNATATTATTTAATAATCCAAATTATATTC
TAGGCTACAATGTCAGCTACACTGAAGACAGACATTACGTTAAAACCAAA
TACACTGTTTCAAGCGACCAAACTAAAATCATGACAGACATTATGACCAA
TGGACCAGTTGAAGGAGCTTTCACTGTCTATGCTGACTTCCCCAACTACA
AATCAGGTTTGAATTTCATGGAAGATTTGAAATATGTAGAGCTGGCTCAC
TTATACTGGATATACTCTTAAAGCGGTAAAAGATGTAAATTACCcatatt
ttaaaagttctccTGTTTGATTTGGACAGTATTTCAAGTAGAGTTGTCtg
atgaaaaattaataaataaataatgtaTCTTTAACTTTGTGTGATCAGTG
TTAGTGATGCCaacaaaataacatttttcttttttgttataGGTGTTTAT
CAACACACCACTGGATCACAACTTGGTGGTCATGCCATCAAAATCCTTGG
ATGGGGTACTGAGAGCGGAACACCTTACTGGTAAGGAAAATCTATATCGA
AATTGTGACCttaataataaatttttttttgctgcaAATAGTTTCAGACA
GTTTCAATAAAACTTACATTAGAAAAGAACCCAACATTTATCTCCTAAAA
TCCATGTAAGTATCCGGATTTCAATTTTGCAAGCAGGTATTTGCAACTAA
CTCATTTTTTCCTGCCTTTCATCAGTATTACAAGACTTAGATAGCCGAAA
GTAATATTTTAATCTATCATTTATGTAGGTTGGTTGCCAACTCATGGAAT
CCAGACTGGGGAAACAAAGGTTCGTTTTCTGCtcagaaagaatttttttt
tctatctgaGGAAACTGGGTTCGAGATTACAGGTTAATGTCTGACAttct
taaagattttaaaaatcttgatgttatttccttgtaaattcattcCCAGG
CCCTTCGGAAGCCAACTGCACATTCaagggttgataggtgtattaCTTTG
ATAGCGTATGAAAAGTGAGAAGGTTGGAAAtagtttatatattatattgg
cTTCTTTTTTTAAAGGGTTTTTCAAGATTAAACGTGGAGGAAATGAATGT
GGCATCGAATCCTCAATCACTGCTGGAATCCCTGcataaatttaaaatga
aaatgatttgtttttAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCACAACAGGCATTTGGTGCTGTAGAAGCTTTTACTGATCGTATCTGTA
TTGCATCAAACGGTGAAAAGAAACCTCACATCTCTGCTGAAGATCTTCTT
TCTTGTTGTGGTTTCTGGTGTGGAATGGGTTGCAATGGAGGTTTCCTCGG
AGGTGCCtggaactttttcaaaagaactgGATGTGTTACCGGTGGACAAT
ACAGTACCAAGGAAGGCTGTAGACCATACAGCATCCCAGCCTGTGAACAC
CACACTACTGGACACTTGAAACCATGCTCTGGAGATTCTCATACaccaag
ctgtgagaaagaatGCAGACAAGGTTTGATCTATTTTCATCATGTGGAAA
GGTTATTTATCTAAATTTGGTGTAcaataaacatgaaatttctaAAACCT
AATAACaaatatgaaaagaaaaagttattgAAGTTAATATCAATAATCAT
AATGATTTATATTATTTAATAATCCAAATTATGTTCTAGGCTACAATGTC
AGCTACACTGAAGACAGACATTACGTTAAAACCAAATACACTGTTTCAAG
CGACCAAACCAAAATCATGACAGACATTATGACCAATGGACCAGTTGAAG
GAGCTTTCACTGTCTATGCTGACTTCCCCAACTACAAATCAGGTTTGAAT
TTCATGGAAGATTTGAAATATGTAGAGCTGGCTCACTTATACTGGATATA
CTCTTAAAGCGGTAAAAGATGTAAATTACCcatattttaaaagttctccT
GTTTGATTTGGACAGTATTTCAAGTAGAGTTGTCtgatgaaaaattaata
aataaataatgtaTCTTTAACTTTGTGTGATCAGTGTTAGTGATGCCaac
aaaataacatttttcttttttgttataGGTGTTTATCAACACACCACTGG
ATCACAACTTGGTGGTCATGCCATCAAAATCCTTGGATGGGGTACTGAGA
GCGGAACACCTTACTGGTAAGGAAAATCTATATCGAAATTGTGACCttaa
taataaatttttttttgctgcaAATAGTTTCAGACAGTTTCAATAAAACT
TACATTAGAAAAGAACCCAACATTTATCTCCTAAAATCCATGTAAGTATC
CGGATTTCAATTTTGCAAGCAGGTATTTGCAACTAACTCATTTTTTCCTG
CCTTTCATCAGTATTACAAGACTTAGATAGCCGAAAGTAATATTTTAATC
TATCATTTATGTAGGTTGGTTGCCAACTCATGGAATCCAGACTGGGGAAA
CAAAGGTTCGTTTTCTGCtcagaaagaatttttttttctatctgaGGAAA
CTGGGTTCGAGATTACAGGTTAATGTCTGACAttcttaaagattttaaaa
atcttgatgttatttccttgtaaattcattcCCAGGCCCTTCGGAAGCCA
ACTGCACATTCaagggttgataggtgtattaCTTTGATAGCGTATGAAAA
GTGAGAAGGTTGGAAAtagtttatatattatattggcTTCTTTTTTTAAA
GGGTTTTTCAAGATTAAACGTGGAGGAAATGAATGTGGCATCGAATCCTC
AATCACTGCTGGAATCCCTGcataaatttaaaatgaaaatgatttgtttt
t

Coding sequence (CDS) from alignment at sc0000261:256535..272785+

>TCONS_00017238 ID=TCONS_00017238|Name=TCONS_00017238|organism=Clytia hemisphaerica|type=CDS|length=7056bp|location=Sequence derived from alignment at sc0000261:256535..272785+ (Clytia hemisphaerica)
ATGAATGCTCTGGCATTGTGTTGTCTATTATCAGTTGCTTTTGCAAAACC
ATCACAAAATGGTTTATACAACCCTTTGTTTCAAGATATCATTGATGAAG
TCAATAGTAAACAAACAACATGGAAAGCCGGTCATAATTTTGATGCCAAT
GTTGACCATGCTTATTTGAAGCATTTATGTGGAACTTTTCTTGATGACCC
CATCAGAGAATCATTGCCAGAGAAACAAGATTTTGAAACAGTTGAGCTGC
CAGATGAATTTGACTCTCGTACAAAATGGGGAGAGATTTGTCCAAGCACA
AAAGAAGTCCGTGACCAAGGAAACTGTGGCAGCTGCTGGGCATTTGGTGC
TGTAGAAGCTTTTACTGATCGTATCTGTATTGCATCGAACGGTGAAAAGA
AACCTCACATCTCTGCTGAAGATCTTCTTTCTTGTTGTGGTTTCTGGTGT
GGAATGGGTTGCAATGGAGGTTTCCTCGGAGGTGCCtggaactttttcaa
aagaactgGATGTGTTACCGGTGGACAATACAGTACCAAGGAAGGCTGTA
GACCATACAGCATCCCAGCCTGTGAACACCACACTACTGGACACTTGAAA
CCATGCTCTGGAGATTCTCATACaccaagctgtgagaaagaatGCAGACA
AGGCTACAATGTCAGCTACACTGAAGACAGACATTACGTTAAAACCAAAT
ACACTGTTTCAAGCGACCAAACTAAAATCATGACAGACATTATGACCAAT
GGACCAGTTGAAGGAGCTTTCACTGTCTATGCTGACTTCCCCAACTACAA
ATCAGGTGTTTATCAACACACCACTGGATCACAACTTGGTGGTCATGCCA
TCAAAATCCTTGGATGGGGTACTGAGAGCGGAACACCTTACTGGTTGGTT
GCCAACTCATGGAATCCAGACTGGGGAAACAAAGGGTTTTTCAAGATTAA
ACGTGGAGGAAATGAATGTGGCATCGAATCCTCAATCACTGCTGGAATCC
CTGcataaATGAATGCTCTGGCATTGTGTTGTCTATTATCAGTTGCTTTT
GCAAAACCATCACAAAATGGTTTATACAACCCTTTGTTTCAAGATATCAT
TGATGAAGTCAATAGTAAACAAACAACATGGAAAGCCGGTCATAATTTTG
ATGCCAATGTTGACCATGCTTATTTGAAGCATTTATGTGGAACTTTTCTT
GATGACCCCATCAGAGAATCATTGCCAGAGAAACAAGATTTTGAAACAGT
TGAGCTGCCAGATGAATTTGACTCTCGTACAAAATGGGGAGAGATTTGTC
CAAGCACAAAAGAAGTCCGTGACCAAGGAAACTGTGGCAGCTGCTGGGCA
TTTGGTGCTGTAGAAGCTTTTACTGATCGTATCTGTATTGCATCGAACGG
TGAAAAGAAACCTCACATCTCTGCTGAAGATCTTCTTTCTTGTTGTGGTT
TCTGGTGTGGAATGGGTTGCAATGGAGGTTTCCTCGGAGGTGCCtggaac
tttttcaaaagaactgGATGTGTTACCGGTGGACAATACAGTACCAAGGA
AGGCTGTAGACCATACAGCATCCCAGCCTGTGAACACCACACTACTGGAC
ACTTGAAACCATGCTCTGGAGATTCTCATACaccaagctgtgagaaagaa
tGCAGACAAGGCTACAATGTCAGCTACACTGAAGACAGACATTACGTTAA
AACCAAATACACTGTTTCAAGCGACCAAACTAAAATCATGACAGACATTA
TGACCAATGGACCAGTTGAAGGAGCTTTCACTGTCTATGCTGACTTCCCC
AACTACAAATCAGGTGTTTATCAACACACCACTGGATCACAACTTGGTGG
TCATGCCATCAAAATCCTTGGATGGGGTACTGAGAGCGGAACACCTTACT
GGTTGGTTGCCAACTCATGGAATCCAGACTGGGGAAACAAAGGGTTTTTC
AAGATTAAACGTGGAGGAAATGAATGTGGCATCGAATCCTCAATCACTGC
TGGAATCCCTGcataaATGAATGCTCTGGCATTGTGTTGTCTATTATCAG
TTGCTTTTGCAAAACCATCACAAAATGGTTTATACAACCCTTTGTTTCAA
GATATCATTGATGAAGTCAATAGTAAACAAACAACATGGAAAGCCGGTCA
TAATTTTGATGCCAATGTTGACCATGCTTATTTGAAGCATTTATGTGGAA
CTTTTCTTGATGACCCCATCAGAGAATCATTGCCAGAGAAACAAGATTTT
GAAACAGTTGAGCTGCCAGATGAATTTGACTCTCGTACAAAATGGGGAGA
GATTTGTCCAAGCACAAAAGAAGTCCGTGACCAAGGAAACTGTGGCAGCT
GCTGGGCATTTGGTGCTGTAGAAGCTTTTACTGATCGTATCTGTATTGCA
TCGAACGGTGAAAAGAAACCTCACATCTCTGCTGAAGATCTTCTTTCTTG
TTGTGGTTTCTGGTGTGGAATGGGTTGCAATGGAGGTTTCCTCGGAGGTG
CCtggaactttttcaaaagaactgGATGTGTTACCGGTGGACAATACAGT
ACCAAGGAAGGCTGTAGACCATACAGCATCCCAGCCTGTGAACACCACAC
TACTGGACACTTGAAACCATGCTCTGGAGATTCTCATACaccaagctgtg
agaaagaatGCAGACAAGGCTACAATGTCAGCTACACTGAAGACAGACAT
TACGTTAAAACCAAATACACTGTTTCAAGCGACCAAACTAAAATCATGAC
AGACATTATGACCAATGGACCAGTTGAAGGAGCTTTCACTGTCTATGCTG
ACTTCCCCAACTACAAATCAGGTGTTTATCAACACACCACTGGATCACAA
CTTGGTGGTCATGCCATCAAAATCCTTGGATGGGGTACTGAGAGCGGAAC
ACCTTACTGGTTGGTTGCCAACTCATGGAATCCAGACTGGGGAAACAAAG
GGTTTTTCAAGATTAAACGTGGAGGAAATGAATGTGGCATCGAATCCTCA
ATCACTGCTGGAATCCCTGcataaATGAATGCTCTGGCATTGTGTTGTCT
ATTATCAGTTGCTTTTGCAAAACCATCACAAAATGGTTTATACAACCCTT
TGTTTCAAGATATCATTGATGAAGTCAATAGTAAACAAACAACATGGAAA
GCCGGTCATAATTTTGATGCCAATGTTGACCATGCTTATTTGAAGCATTT
ATGTGGAACTTTTCTTGATGACCCCATCAGAGAATCATTGCCAGAGAAAC
AAGATTTTGAAACAGTTGAGCTGCCAGATGAATTTGACTCTCGTACAAAA
TGGGGAGAGATTTGTCCAAGCACAAAAGAAGTCCGTGACCAAGGAAACTG
TGGCAGCTGCTGGGCATTTGGTGCTGTAGAAGCTTTTACTGATCGTATCT
GTATTGCATCGAACGGTGAAAAGAAACCTCACATCTCTGCTGAAGATCTT
CTTTCTTGTTGTGGTTTCTGGTGTGGAATGGGTTGCAATGGAGGTTTCCT
CGGAGGTGCCtggaactttttcaaaagaactgGATGTGTTACCGGTGGAC
AATACAGTACCAAGGAAGGCTGTAGACCATACAGCATCCCAGCCTGTGAA
CACCACACTACTGGACACTTGAAACCATGCTCTGGAGATTCTCATACacc
aagctgtgagaaagaatGCAGACAAGGCTACAATGTCAGCTACACTGAAG
ACAGACATTACGTTAAAACCAAATACACTGTTTCAAGCGACCAAACTAAA
ATCATGACAGACATTATGACCAATGGACCAGTTGAAGGAGCTTTCACTGT
CTATGCTGACTTCCCCAACTACAAATCAGGTGTTTATCAACACACCACTG
GATCACAACTTGGTGGTCATGCCATCAAAATCCTTGGATGGGGTACTGAG
AGCGGAACACCTTACTGGTTGGTTGCCAACTCATGGAATCCAGACTGGGG
AAACAAAGGGTTTTTCAAGATTAAACGTGGAGGAAATGAATGTGGCATCG
AATCCTCAATCACTGCTGGAATCCCTGcataaATGAATGCTCTGGCATTG
TGTTGTCTATTATCAGTTGCTTTTGCAAAACCATCACAAAATGGTTTATA
CAACCCTTTGTTTCAAGATATCATTGATGAAGTCAATAGTAAACAAACAA
CATGGAAAGCCGGTCATAATTTTGATGCCAATGTTGACCATGCTTATTTG
AAGCATTTATGTGGAACTTTTCTTGATGACCCCATCAGAGAATCATTGCC
AGAGAAACAAGATTTTGAAACAGTTGAGCTGCCAGATGAATTTGACTCTC
GTACAAAATGGGGAGAGATTTGTCCAAGCACAAAAGAAGTCCGTGACCAA
GGAAACTGTGGCAGCTGCTGGGCATTTGGTGCTGTAGAAGCTTTTACTGA
TCGTATCTGTATTGCATCGAACGGTGAAAAGAAACCTCACATCTCTGCTG
AAGATCTTCTTTCTTGTTGTGGTTTCTGGTGTGGAATGGGTTGCAATGGA
GGTTTCCTCGGAGGTGCCtggaactttttcaaaagaactgGATGTGTTAC
CGGTGGACAATACAGTACCAAGGAAGGCTGTAGACCATACAGCATCCCAG
CCTGTGAACACCACACTACTGGACACTTGAAACCATGCTCTGGAGATTCT
CATACaccaagctgtgagaaagaatGCAGACAAGGCTACAATGTCAGCTA
CACTGAAGACAGACATTACGTTAAAACCAAATACACTGTTTCAAGCGACC
AAACTAAAATCATGACAGACATTATGACCAATGGACCAGTTGAAGGAGCT
TTCACTGTCTATGCTGACTTCCCCAACTACAAATCAGGTGTTTATCAACA
CACCACTGGATCACAACTTGGTGGTCATGCCATCAAAATCCTTGGATGGG
GTACTGAGAGCGGAACACCTTACTGGTTGGTTGCCAACTCATGGAATCCA
GACTGGGGAAACAAAGGGTTTTTCAAGATTAAACGTGGAGGAAATGAATG
TGGCATCGAATCCTCAATCACTGCTGGAATCCCTGcataaATGAATGCTC
TGGCATTGTGTTGTCTATTATCAGTTGCTTTTGCAAAACCATCACAAAAT
GGTTTATACAACCCTTTGTTTCAAGATATCATTGATGAAGTCAATAGTAA
ACAAACAACATGGAAAGCCGGTCATAATTTTGATGCCAATGTTGACCATG
CTTATTTGAAGCATTTATGTGGAACTTTTCTTGATGACCCCATCAGAGAA
TCATTGCCAGAGAAACAAGATTTTGAAACAGTTGAGCTGCCAGATGAATT
TGACTCTCGTACAAAATGGGGAGAGATTTGTCCAAGCACAAAAGAAGTCC
GTGACCAAGGAAACTGTGGCAGCTGCTGGGCATTTGGTGCTGTAGAAGCT
TTTACTGATCGTATCTGTATTGCATCGAACGGTGAAAAGAAACCTCACAT
CTCTGCTGAAGATCTTCTTTCTTGTTGTGGTTTCTGGTGTGGAATGGGTT
GCAATGGAGGTTTCCTCGGAGGTGCCtggaactttttcaaaagaactgGA
TGTGTTACCGGTGGACAATACAGTACCAAGGAAGGCTGTAGACCATACAG
CATCCCAGCCTGTGAACACCACACTACTGGACACTTGAAACCATGCTCTG
GAGATTCTCATACaccaagctgtgagaaagaatGCAGACAAGGCTACAAT
GTCAGCTACACTGAAGACAGACATTACGTTAAAACCAAATACACTGTTTC
AAGCGACCAAACTAAAATCATGACAGACATTATGACCAATGGACCAGTTG
AAGGAGCTTTCACTGTCTATGCTGACTTCCCCAACTACAAATCAGGTGTT
TATCAACACACCACTGGATCACAACTTGGTGGTCATGCCATCAAAATCCT
TGGATGGGGTACTGAGAGCGGAACACCTTACTGGTTGGTTGCCAACTCAT
GGAATCCAGACTGGGGAAACAAAGGGTTTTTCAAGATTAAACGTGGAGGA
AATGAATGTGGCATCGAATCCTCAATCACTGCTGGAATCCCTGcataaAT
GAATGCTCTGGCATTGTGTTGTCTATTATCAGTTGCTTTTGCAAAACCAT
CACAAAATGGTTTATACAACCCTTTGTTTCAAGATATCATTGATGAAGTC
AATAGTAAACAAACAACATGGAAAGCCGGTCATAATTTTGATGCCAATGT
TGACCATGCTTATTTGAAGCATTTATGTGGAACTTTTCTTGATGACCCCA
TCAGAGAATCATTGCCAGAGAAACAAGATTTTGAAACAGTTGAGCTGCCA
GATGAATTTGACTCTCGTACAAAATGGGGAGAGATTTGTCCAAGCACAAA
AGAAGTCCGTGACCAAGGAAACTGTGGCAGCTGCTGGGCATTTGGTGCTG
TAGAAGCTTTTACTGATCGTATCTGTATTGCATCGAACGGTGAAAAGAAA
CCTCACATCTCTGCTGAAGATCTTCTTTCTTGTTGTGGTTTCTGGTGTGG
AATGGGTTGCAATGGAGGTTTCCTCGGAGGTGCCtggaactttttcaaaa
gaactgGATGTGTTACCGGTGGACAATACAGTACCAAGGAAGGCTGTAGA
CCATACAGCATCCCAGCCTGTGAACACCACACTACTGGACACTTGAAACC
ATGCTCTGGAGATTCTCATACaccaagctgtgagaaagaatGCAGACAAG
GCTACAATGTCAGCTACACTGAAGACAGACATTACGTTAAAACCAAATAC
ACTGTTTCAAGCGACCAAACTAAAATCATGACAGACATTATGACCAATGG
ACCAGTTGAAGGAGCTTTCACTGTCTATGCTGACTTCCCCAACTACAAAT
CAGGTGTTTATCAACACACCACTGGATCACAACTTGGTGGTCATGCCATC
AAAATCCTTGGATGGGGTACTGAGAGCGGAACACCTTACTGGTTGGTTGC
CAACTCATGGAATCCAGACTGGGGAAACAAAGGGTTTTTCAAGATTAAAC
GTGGAGGAAATGAATGTGGCATCGAATCCTCAATCACTGCTGGAATCCCT
Gcataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009642XLOC_009642Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017238-proteinTCONS_00017238-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017238-exon-sc0000261-1491911889:256535..256623TCONS_00017238-exon-sc0000261-1491911889:256535..256623Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:256535..256623TCONS_00017238-exon-sc0000261-1510915933:256535..256623Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:256535..256623TCONS_00017238-exon-sc0000261-1575043694:256535..256623Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:266674..266894TCONS_00017238-exon-sc0000261-1491911889:266674..266894Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:266674..266894TCONS_00017238-exon-sc0000261-1510915933:266674..266894Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:266674..266894TCONS_00017238-exon-sc0000261-1575043694:266674..266894Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:267211..267329TCONS_00017238-exon-sc0000261-1491911889:267211..267329Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:267211..267329TCONS_00017238-exon-sc0000261-1510915933:267211..267329Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:267211..267329TCONS_00017238-exon-sc0000261-1575043694:267211..267329Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:267608..267920TCONS_00017238-exon-sc0000261-1491911889:267608..267920Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:267608..267920TCONS_00017238-exon-sc0000261-1510915933:267608..267920Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:267608..267920TCONS_00017238-exon-sc0000261-1575043694:267608..267920Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:269938..270090TCONS_00017238-exon-sc0000261-1491911889:269938..270090Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:269938..270090TCONS_00017238-exon-sc0000261-1510915933:269938..270090Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:269938..270090TCONS_00017238-exon-sc0000261-1575043694:269938..270090Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:270327..270414TCONS_00017238-exon-sc0000261-1491911889:270327..270414Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:270327..270414TCONS_00017238-exon-sc0000261-1510915933:270327..270414Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:270327..270414TCONS_00017238-exon-sc0000261-1575043694:270327..270414Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:272399..272439TCONS_00017238-exon-sc0000261-1491911889:272399..272439Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:272399..272439TCONS_00017238-exon-sc0000261-1510915933:272399..272439Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:272399..272439TCONS_00017238-exon-sc0000261-1575043694:272399..272439Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1491911889:272686..272785TCONS_00017238-exon-sc0000261-1491911889:272686..272785Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1510915933:272686..272785TCONS_00017238-exon-sc0000261-1510915933:272686..272785Clytia hemisphaericaexon
TCONS_00017238-exon-sc0000261-1575043694:272686..272785TCONS_00017238-exon-sc0000261-1575043694:272686..272785Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:256535..272785 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.36508	11.4621	7.38806	12.4458	10.2338	6.5125	21.2021	23.5967	54.4389	47.8273	57.1526	37.4034	41.6583	52.5683	32.8697	27.9525	14.9945	14.4415	30.4639	33.3174	27.2506	32.199	38.2377	41.6425	96.3596	73.8861	21.5825	33.9142	117.272	101.787
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000668Peptidase_C1A_C
IPR012599Propeptide_C1A
IPR025661Pept_asp_AS
IPR000169Pept_cys_AS
IPR025660Pept_his_AS
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0050790regulation of catalytic activity
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0004197cysteine-type endopeptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0050790 regulation of catalytic activity
molecular_function GO:0004197 cysteine-type endopeptidase activity
molecular_function GO:0008234 cysteine-type peptidase activity
Blast
[Close]
BLAST of TCONS_00017238 vs. Swiss-Prot (Human)
Match: CATB (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 379.022 bits (972), Expect = 1.788e-129
Identity = 190/331 (57.40%), Postives = 239/331 (72.21%), Query Frame = 1 
Query:  103 ALCCLLSVAFAKPSQNGLYNPLFQDIIDEVNSKQTTWKAGHNFDANVDHAYLKHLCGTFLDDPIRESLPEKQDF-ETVELPDEFDSRTKWGEICPSTKEVRDQGNCGSCWAFGAVEAFTDRICIASNGEKKPHISAEDLLSCCGFWCXXXXXXXXXXXAWNFFKRTGCVTGGQYSTKEGCRPYSIPACEHHTTGHLKPCSGDSHTPSCEKECRQGYNVSYTEDRHYVKTKYTVSSDQTKIMTDIMTNGPVEGAFTVYADFPNYKSGVYQHTTGSQLGGHAIKILGWGTESGTPYWLVANSWNPDWGNKGFFKIKRGGNECGIESSITAGIP 1092
            +LCCLL +A A+   +  ++PL  ++++ VN + TTW+AGHNF  NVD +YLK LCGTFL  P     P++  F E ++LP  FD+R +W + CP+ KE+RDQG+CGSCWAFGAVEA +DRICI +N      +SAEDLL+CCG  CG GCNGG+   AWNF+ R G V+GG Y +  GCRPYSIP CEHH  G   PC+G+  TP C K C  GY+ +Y +D+HY    Y+VS+ +  IM +I  NGPVEGAF+VY+DF  YKSGVYQH TG  +GGHAI+ILGWG E+GTPYWLVANSWN DWG+ GFFKI RG + CGIES + AGIP
Sbjct:    7 SLCCLLVLANARSRPS--FHPLSDELVNYVNKRNTTWQAGHNF-YNVDMSYLKRLCGTFLGGP---KPPQRVMFTEDLKLPASFDAREQWPQ-CPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
The following BLAST results are available for this feature:
BLAST of TCONS_00017238 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CATB1.788e-12957.40Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
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