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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016835 ID=TCONS_00016835|Name=TCONS_00016835|organism=Clytia hemisphaerica|type=transcript|length=965bp
GTTGGTTCTAATGATCATCCTGTGGAACtaatagaaaaataatatcaaga
TGCCTCAATTAGGAAAGAGTGCCAAAATGTTGGTACACATCAACTACAGA
ATGAGATGTCATTTACAAGATGGTCGATTATTTATTGGTACATTCTTGGC
TTTTGACAAACACATGAATCTTATTCTTGGTGACTGTGATGAGTTCAGGA
AGATCAAATCCAAGGGCGGCTCCGAAAAGGGACGTGAGGAAAAACGTGCC
CTTGGTCTTGTTTTACTAAGAGGAGAACATTTAGTTTCAATGACTGTTGA
AGCTCCTCCATCAAAAGAGGACCGAAACAAAACACCAGCTGCTAAAGCCA
CCCCTGGCGCTGGTATGGGACGTGCAGCTGGCCGAGGAATGCCCACACCA
AGTATGGGAGCTGCACCTGCTGGTCTGGCTGGTCCCGTTCGTGGAGTCGG
TGGCCCATCACAACAAGCAATGGCTCCACCACCACAACAGTATGGCCGAG
GAGGGCCACCACCACCAGGAATGATGGGAGGACCTCCACCCGGTATGAGA
CCTCCAGGAAACCCCAACTGGTAAAAGAAAACAGCTATGAATTTGAACTG
GTAAAACAAATGGATAATAATCAGCAATAACTGTTCCTTGTGTAAGATAA
CAATATTTTAAGGATATTTCATGGAGCTGTTAGAGACCTCCAGGAAACCC
CAACTGGTAAAAGAAAACAGCTATGAATTTGAACTGGTAAAACAAATGGA
TAATAATCAGCAATAACTGTTCCTTGTGTAAGATAACAATATTTTAAGGA
TATTTCATGGAGCTGTTAGAGACatcaaaggtattttattgctAAATTAT
CAATATGAAAAAGGACATTCATTTTTATGCATactttttaactaaaatag
ttACTCTTGGTAAGAGAAAGAGAAGCTGCGCTTTTGTTTTGTATTTAGGT
CGCGTGTCATGGGAC Run BLAST on NCBI transcript from alignment at sc0000253:25578..38690+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016835 ID=TCONS_00016835|Name=TCONS_00016835|organism=Clytia hemisphaerica|type=transcript|length=13113bp|location=Sequence derived from alignment at sc0000253:25578..38690+ (Clytia hemisphaerica)
GTTGGTTCTAATGATCATCCTGTGTAAGTCTCAAGGTTTGTTAGTTTGGA
AATAGTATTTTTAACTGtgtgttttttcaattcaatctCATTGCTATTGG
GTTTTTGAAGACTTTTTAAACAAATAATtttaggaccctgccgacgcacc
ggactgtacggtgtatttgtccggtggcaaaaagtatcctttcgctacac
cggacgcaataagtctggtgttgcatacagggaatttttgACGCCTGACA
Tttacgaaacaaaaaattaagaaacaccggacgcaccggactggtcatgt
caggtgttttgattgtccggtggaaaaaatatccttctccaacaccggac
atccgacttccttaagtccggtgtagagattgtccggtggtaaaaaaaat
tctcattttacaccggactttttTACACCATACTAATTTTTAGGATGCAG
ACCTTTTtttcacgtgcgtttggtttgggaacgcgaaacacgaacgcaaa
ctacccatgtctaaacttttcaatatatctccagaactaacagattttNA
ATGATCATCCTGTGTAAGTCTCAAGGTTTGTTAGTTTGGAAATAGTATTT
TTAACTGtgtgttttttcaattcaatctCATTGCTATTGGCTTTTTGAAT
ACTTTTTAAACAAATAATtttaggaccctgccgacgcaccggactgtacg
gtgtatttgtccggcggcaaaaagtatcctttcgctacaccggacgcaat
aagtctggtgttgcatacagggaatttttgacgccggacatttacgaaac
aaaaaattaagaaacaccggacgcactggactggtcatgtcaggtgtttt
gattgtcaggtggaaaaaatatccttctccaacaccggacatccaacttc
cttaagtccggtgtagagattgtccggtggtaaaaaaaattctcatttta
caccggactttttTACACCATACTAATTTTTAGGATGCAGACCTTTTTTT
TTGCGACCTGCTTTGTTTTGATCTgccagtctaaacttaaactgctacat
caggattagaaactaggctagtcttacctcttttatatttttttcagtcT
GTGATCCTAAGGCCGATGGAATTTAATGTTATCTTTACCGTAAGCCGCCC
GCGTGTTCAAAAACCTGCCGCatcaagttgtcattatttgccattttctc
gaaaagttgtcattatttttcctcCCACTTGAgcagagaacaaaaatttt
cgaagttgatatcaaaacaaacggcccgtgGCTTTTTTAGATTGTTAACA
ACCCGAACGGCTCTCTAGTTGTCTTTACcgtgtgaatttaattttttcat
attgtggagataacattatataattctctagcgggaagaaaaagatttat
ctcTTTAAGCTTGTACAAACAGGAATCAATagaatcaataaaaacacgAG
AGTTCCGATTGTGTATctaaggaaaaatgaaaaatctggtaaaaataaat
gtttatgggaaaataatgaataatgaataatgaaaacttggccggtaaac
atatcattaatttccatcagcctaaggcttaggttttttctcatcttcaa
tttactgaagaaagcaggaatttgatgcaagagttagattgtgctgtaaa
aaatcattgaataaaagaagaactttaaatctttattatttttattttga
agaattggtgcaaaaaagtgaaacatggaaaattttcattttttattggc
tTAATTGAaaggggatttggaaaactttctatgtttgtttttttgcacaa
ttccCTGCTAGTTTTCAGAAggcacaagtgttacgcgtaagccaaatcgc
gtatcaCTGCTGTTCCCCTCAGGCAAAATCGTCGATTCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTTAATTCGGCAAAGTTTAG
TAAACTCGACCacgtatcaatgttttgatttttcaagcggggatttctgt
agaatgataaaatatggcTTGGCTGGAATCGACGCCATAACAGCAGTGGT
ATTacaaacaacctctaaattgccgagtacaggagaaaaaaaatcgaaat
tcaaaatggcggccaagcccatgCTGAACATTTCGCTAAATGCTCAGAGC
GCGACGGCCCATTTTCCCTTTCCTTTATCTTTCACCTTACCTGTTTTTTc
tactttctgagacttagtttctcatttctgactgagttcatacctgtcaa
tcatttgtccatcaatttcgaccagtctagttttcgcaccgagtgggatt
cgaaccaccaccaaagaaagacctcaGTGCTacaaataaggaaatttcag
ttggccggtaTTTTTTTGAGCGCAACGAAAATAATTTGAGCAGGGGGTCT
GGCAGAACACCATTAGAAAAGTCTGAAATGACCTTTACATTGGCTAAACA
CCTGtattaattcaaaatctattCTTCTTTTAATTGGAAACGTTATTAAG
TATTTATCTAAGCCTCTAGTCTTtaaattttaaccggacaaaatgaaaga
ttgagcttcagaatggctggtagaaactacgaaatgaccggtaattacca
gtcaccggccgttatttgcagcactgtacCTTCAGATTtcgaagccagcg
ctctatccgttgagccatcgccgcagaGCAACAACctgcaattcataaca
tattataccgaactggcaaaataCGGTTACTAgtaaccctgcggggccca
aggcgccaagtatgcacccggcacagtgacaagccgttactagcaaccct
gacccgaTACCCCCTGAATCACGGAATTACGGATAGGAAAAGTTATCGGG
AAAAAAATTGCTcgttacatttcaaaataaaacgatttccaaaccaacct
aaagtcagtgtctgccaactaaaaacttctctgcgttacgacttcagact
ttagattccaattcttgtataggctgcaactacactgccaaatggtctgt
attacaaagacttccaaatgggtccataagttaagaaaatgagattatca
tctagcacgggggttttgtttttaaaaacaNataagttaagaaaatgaga
ttatcatccagtatcatctagcacgggggttttgtttttaaaaacaaact
tcaaaataaaattgttaatgaacttgttacttttatgtttgccgcaagaa
ggaagaaaaatttaatttgacccccggtttttctctctttttctagccat
ttcccgcgtgttagtgtaaacacaactttaatccggggaaatgaagcgtt
ttcattggtctaaaatcatggatggtcacgtgaccagaatttttatccag
gaaaatgccgtggccgcaatgttttgctttagtgagattgaccattttgt
tgtttagatttgagcgggcaaaatttctgtacaaaccaaaatatggcttc
gttggaatactggttgaaacacttgtgaagGCGGCCCCGAGaagattttt
gacttttgaaatgcTGCCCCTGAGATAGTGTTGTGCGCCGAAGGTGCAAA
AAGGGCGCTGAAGTTGCAAAAAGGGGTGAttttttaggggtattttataC
AAAATTCATTATCTTTGTTTTGGTACCGCGATTGAGATGTTCATTAGTGT
TGAGGGCGTTGTTATTTTTCAGGACGGAAGGCCGCATTTTATTAAAAAGG
GCGGTCGATTGGGCGTGAACTTATTAATTTCAGCCGTCataatattatca
aaatcattttcagaagaaaagatGGCGGACGTTGGCGGTGGTTTGTAGAT
GCTGCCCTCTGCCTTGAAATCTTGCACTTTCTACCCTTGGTAAGAAGCAT
TTCTGCCCCTGCCCCTGCCGAAATCTGCCAtgatcagggggggggtcaac
atttataataccaacccatagcccaaaaacctgacttttgaccttttgag
ctaagttaacaccaccaccccaaaattggtatctaCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc
cggagcttgatttaaaaagagactcatgtacaaactcacgaaattgacca
aaaccgagcgttagacttggaggaggaggagaagaagaaattttaccgtt
ttaacaaatatttcctatagataggaaatatttaataaaaaaagaatgaa
caaaaaatctagatcctgaagctcacaatatctcgacaaagttgtatact
tttttttggtgcacccggcataatgttaacaaactttttcacGAAAGAAA
GAAATATCAGTAGAAGAGCTTCCTCAAAAGATGGAGCTGATGCTGATGCA
CCACCAAAATTAAGGGCATGTTATGTATACATAAGAGTCTTGCAaattta
aggggggggggacaggccatattttagaaaggcaaggcagcgtccgctgg
tggccaaaaagggcactttttccagtgttttccactaaaaaggctgtttt
taccaatattttagtaatttcaagaggggcagcgtccgataaccaaacgc
ttaaagggcatgaaaaatggtgTGGGGGAGTAAAACTTAAGTAAGGGGCA
CCTCAAAACCATCTTCAAGCTTTAAAGTGGGATAAATTGATAAGGGGTGA
TTTGTGTTTTAAGGGGGGACTCAAAATCATGGATGAAACCATCCCAAGTA
TGAATCAAACCTCAGTTGCTTGTGCAGCAACCagggtcaatgaccactat
accaggCATCTTAGGAAatggtcgtggcttcttcacaaCTCAGGCATGga
aataagggatagaaagtgcatcgcaattttttgataagcatgattttgta
tcctaaaatggatcaattttcaatttttagcttgtaagtaatcAAAAAAT
GCATCGCAAATTGCAAAATGCGATacgctaattcgatccctgcaactgca
aaattttattggtttctttGTGATGGTATCCAATCAATTGATTGGTTATC
TATTAGTCATTGATCAGAAAAAGATATCGAGTGGGAGAGTCATTTTTTTA
TAGAAGATTCAGCCTGATCGGCTGGGTTTCGCTGTATCACTAGCCAGTAA
CTTTCCTGCCCACTTTGGTAATTTTCAATGCACCCGTTTGATTTATGGAA
AAACTGACTcagcagaaaaaaggaaaacaaattaaaatgaaaacatagat
tcctTTATAAACAAATTGCCTGTTAGCTGGAATCTTAATACATGTGCTCG
ATTTTTTGATGTGGCTTTTAGTAGTTTTGATAGTTTgttaaagagttttt
atggtaagttgattatgcgTGTTTCCCTGGGTTTCCAAAGCTCAGAAGGT
CTTAAACAAGGTGGACACAGACTGTTTCAAAAATTCTGTTTCAAACATTC
TGTATCAGACTTATCTACATATACCAAGTtccataattttagaactttgt
atggtGAGGTTATTTTTCTGTATAAACAAAAATATGGCTTTGTTGGAATG
ATATTTGACAAGTGTTTCAAAGTTGGCAGAGACACAATGCCAATTATCTA
CTTGATACCTTAGCCTTTTCTGCTGCCTGTTCTGATTAAAAGTTTCTGCG
ACATCCCTGaatataatttttcttcttaatGTTGTTCAATTTAGGCTCTA
GACAAAGTTAAAACTTAAAATAATGACAGATGATAGCATCAGGAATGATC
CTGATTATAAGGATTTTTACAACAGTAGTAATAATGACCCAAATTCAGCA
AGAGCGGCTGATTCAAAAGACTTAActgtaaataaaattgaaagtatTGT
TGAAAAACAATTTGCCTTGGAGTTGGAATTCAAAGAGCAAGAGATACAAA
AGATCGAGCAACGCATCAATCAAACAAAATCTATGCTTGATCGGTTACGG
GCATATGTTGCTGCAGGTTATTTTGGATCTGGTGGATTAGTTGTTCCAGG
ATCGAAGGCTATCACTAATGAaccaaaacctaaaaaacaAAAGAGTACAG
CAGATGGTTTGGATCCTGCTGCAACTTCTTTGGTGTTGAAAAATATGGAC
AAAgagaaggaacctaaaaatgATGAAAGTCAAGAACCAGAGATGGCTGA
TACCAATCAACCTGTGAGTGGAGAAACTGATAGTAGATTTTATGTATCCA
AGAAACTGATCGTCGGGAATGTGTCCAAATATTTACTTGCAGATAGTCGT
AAGGAAAATGATCAATCAACGCATAAATGGATGGTCTATGTTAGAACCGA
ATCAGGAGACGacaaagaaatagaaaaatacatcaaatgtgttcttttct
ttttacatcCAAGTTACATTCCAAACGATATTGTCACTGTCTCAAAACCA
CCTTTCCAAGTCACCAGGAGAGGTTGGGGTGAATTTCCAGTTCGTGTTCA
ACTCCATTTCCGTGATGCTCGTAATAAAAGGTTTGATGTGATTCACAACt
taaaattagataaaacttaCACTGGACTACAAACACTTGGAGCTGAAACC
ATTGTAAATATTGAACTACACAAGCATGCAAATAATGAGAATCTGATTAT
TTCTAAAAGTTCAACACCTTCCCCTGCACCTTCAACGCAAGAAATCGCCA
GTGATAAAACAGAATCGCATAATGAACAAGACAAAGAAAACGTAATTTCT
AAAGAAAACGTAATTTCTAAAGAAGATATTGAACAATTAAAGTTGTCTCT
ACCTTTACCTGTCATTGCCGACCTCAAATCAAAACTACCAACTGCTGAAT
GTGCCTCCAGTTGTGTGAGCAGTGCAAACCCTTCCAGGTGTAACTCTCCA
GTATCGGAAATCTCTTTCTTTAGCAATTTGGTTCAATTAGAATCAGAAAT
TGATTGCAAAttatacagtttgatccaacaTGCCCCACTTATTGCAACTG
ATGGTGTGAAGAGTAAATTTTTTACTTGCCAAAGTATTGAATTATATGAA
AGTTGGCATTTTACAAAACGACGTGCTTTTGAATGGTACAGAGCTTCACA
CTTACGTAAACTATATGCAAAAAATTATCAAGACATGACCAGGTGTCCTT
CTACGAAAGAGATATTAGTTTGGTTGCGACAATGTGGTTTCACACCACCA
GAAAAGGACTTGAATGTTATTTTACGCACTCTGTTGTGTTGTCGAAAATG
TGGGAAGTGCCTTACAAGAGATCATAATAAAAATACTTATTGTAGTAATT
GCAAAGATAAATTGTATGCACCAGAACCATTACCAGACTCATTGTCACCT
TACACGTCTGTACTTTCTAACGTTCAAATTAAAGAAGAGACTTTACAATG
TCTTGAAAAAGCTGTCAAGCAAGAGGAATCAGAATCAGATATTGATTTAG
ATATTGTTAAAGTTCCCTCTGTCTTAACAGTATCAAAACACTCGGATATT
GAAGCCCCTAATGATATTTTACCTACACTTGCAGAGACATGGGTTTCAAA
TGTTTTATATCAATTCGGTATCCAAATCAAACCTTATGTTCTTGGGAACA
CAAAAACACCAGTTGTACAAGCAATGCTGCTGCGAGCTATGAAATTGTTC
ATGTGTCAGTTGTTGAGGAAAAGTAATATTGAAGCAAAAACAGAGAACAC
CAATACATTAGAACCAGCCTTGATCACTTTTCGTCAAGTTCATTCAGCCA
TCTTGAAAGagccactttttgattttttgactgATGCCCATTTAGGGAAA
TTGTAATTTTATTACTATGACCATAAGGGAAGGAATTTTCGGGGAAACAA
TGATTGAAGTACGGTGTCAACACCTAAAAAATTAGAACTTTTGTAACATC
TATAGAATTATCATAAACAATGTGTAACCAATACAGTTAATTCGTTAATT
TTTTTAGATCAAAGACACCCTCAAATATTTGTTAAATCCTCTGAAAATTC
TTTTCTGTaaccttaaaaaataattttcatgagAATAATAGAATGTCATA
ATATGATTCGCTCGGTCTTGAAGCAATATGAATTTAAAATTATTCCTATA
TGCTATAATCGCATCACTCATCATAAGTATTATGCATTTTTAAGAAGctc
tgaaattttgtacacatGTCATGGATgagattgaaaattatttttaaggg
TGACAAAgatgaattgttttttttttatctcctACATGGCTTGTAAATCA
AATTTTGGAGCTAGTTGTTTTCCAGGCGATGGTCTATTCTACCCTTCAAC
ATCTTATTTCAAGATATTTATTGAATCTNATCCAAGTTACATTCCAAACG
ATATTGTCACTGTCTCAAAACCACCTTTCCAAGTCACCAGGAGAGGTTGG
GGTGAATTTCCAGTTCGTGTTCAACTCCATTTCCGTGATGCTCGTAATAA
AAGGTTTGATGTGATTCACAACttaaaattagataaaacttaCACTGGAC
TACAAACACTTGGAGCTGAAACCATTGTAAATATTGAACTACACAAGCAT
GCAAATAATGAGAATCTGATTATTTCTAAAAGTTCAACACCTTCCCCTGC
ACCTTCAACGCAAGAAATCGCCAGTGATAAAACAGAATCGCATAATGAAC
AAGACAAAGAAAACGTAATTTCTAAAGAAAACGTAATTTCTAAAGAAGAT
ATTGAACAATTAAAGTTGTCTCTACCTTTACCTGTCATTGCCGACCTCAA
ATCAAAACTACCAACTGCTGAATGTGCCTCCAGTTGTGTGAGCAGTGCAA
ACCCTTCCAGGTGTAACTCTCCAGTATCGGAAATCTCTTTCTTTAGCAAT
TTGGTTCAATTAGAATCAGAAATTGATTGCAAAttatacagtttgatcca
acaTGCCCCACTTATTGCAACTGATGGTGTGAAGAGTAAATTTTTTACTT
GCCAAAGTATTGAATTATATGAAAGTTGGCATTTTACAAAACGACGTGCT
TTTGAATGGTACAGAGCTTCACACTTACGTAAACTATATGCAAAAAATTA
TCAAGACATGACCAGGTGTCCTTCTACAAAAGAGATATTAGTTTGGTTGC
GACAATGTGGTTTCACACCACCAGAAAAGGACTTGAATGTTATTTTACGC
ACTCTGTTGTGTTGTCGAAAATGTGGGAAGTGCCTTACAAGAGATCATAA
TAAAAATACTTATTGTAGTAATTGCAAAGATAAATTGTATGCACCAGAAC
CATTACCAGACTCATTGTCACCTTACACGTCTGTACTTTCTAACGTTCAA
ATCAAAGAAGAGACTTTACAATGTCTTGAAAAAGCTGTCAAGCAAGAGGA
ATCAGAATCAGATATTGATTTAGATATTGTTACAGTTCCCTCTGTCTTAA
CAGTATCAAAACACTCGGATATTGAAGCCTCTAATGATATTTTACCTACA
CTTGCAGAGACATGGGTTTCTAATGTTTTGTATCAATTCGGTATCCAAAT
CAAACCTTATGTTCTTGGGAACACAAAAACACCAGTTGTACAAGCAATGC
TGCTGCGAGCTATGAAATTGTTCATGTGTCAGTTGTTGAGGAAAAGTAAT
ATTGAAGCAAAAACAGAGAACACCAATACATTAGAACCAGCCTTGATCAC
TTTTCGTCAAGTTCATTCAGCCATCTTGAAAGagccactttttgattttt
tgactgATGCCCATTTAGGGAAATTGTAATTTTATTACTATGACCATAAG
GGAAGGAATTTTCGGGGAAACAATGATTGAAGTACGGTGTCAACCTAAAA
AATTAGAACTTGGGTAACATCTATTGATTTATCATAAACAATGTGTAACC
ATTACAGTTTATTCGTTAATTTTTTTAGATCAAAGACACCCTCAAATGTT
TGTTAAATCCTGTGAAAATTCTTTTCTGTaaccttaaaaaataattttca
tgagAATAATAGAATGTCATAATATGATTCGCTCGGTCTTGAAGCAATAT
GAATTTAAAATTATTCCTATATGCTATAATCGCATCACTCATCATAAGTA
TTATGCATTTTTAAGAAGctctgaaattttgtacacatGTCATGGATgag
attgaaaattatttttaagggTGACAAAGatgaattgttttttctttatc
tcCTACATGGCTTGTAAATCAAATTTTGGAGCTAGTTGTTTCCCAGGCGA
TGGTCTATTCAACCCTTCGACATCTTATTTCAAGACTTGTCTGATATTTA
TTGAATCTGCTAGCTTCAGATATGTCATGTTGAAATACTGTACcgatttt
tatgtttatttatcTTTTCAGGGAACtaatagaaaaataatatcaagaTG
CCTCAATTAGGAAAGAGTGCCAAAATGTTGGTACACATCAACTACAGAAT
GAGATGTCATTTACAAGATGGTCGATTATTTATTGGTACATTCTTGGCTT
TTGACAAACACATGAATCTTATTCTTGGTGACTGTGATGAGTTCAGGAAG
ATCAAATCCAAGGGCGGCTCCGAAAAGGGACGTGAGGAAAAACGTGCCCT
TGGTCTTGTTTTACTAAGAGGAGAACATTTAGTTTCAATGACTGTTGAAG
CTCCTCCATCAAAAGAGGACCGAAACAAAACACCAGCTGCTAAAGCCACC
CCTGGCGCTGGTATGGGACGTGCAGCTGGCCGAGGAATGCCCACACCAAG
TATGGGAGCTGCACCTGCTGGTCTGGCTGGTCCCGTTCGTGGAGTCGGTG
GCCCATCACAACAAGCAATGGCTCCACCACCACAACAGTATGGCCGAGGA
GGGCCACCACCACCAGGAATGATGGGAGGACCTCCACCCGGTATGAGACC
TCCAGGAAACCCCAACTGGTAAAAGAAAACAGCTATGAATTTGAACTGGT
AAAACAAATGGATAATAATCAGCAATAACTGTTCCTTGTGTAAGATAACA
ATATTTTAAGGATATTTCATGGAGCTGTTAGAGACATCAAAGGTGTTTTA
TTGCTAAATTATCAATATGAAAAAGGACATTCATTTTTATGCATACTTTT
TAACCAAAATAGTTACTCTTGGTAAGAGAAAGAGAAGCTGCGCTTTTGTT
TTGTATTTAGGTCGCGTGTCATGAGACAAagtaaataattgtttttattt
tgatttataaCATTTTAACGACTTTGTCTTTTTAATTTCTTCAGATTAGC
CACTGCGTTATAATCTGAAATCCTTCAAAATTCCTGATTATTTAAAGGTT
GTATCATTTTCaccttttcaaaattcatgtgcTTTATATTGCATTTTTCG
GACATAATAAATCCCTAAAAAATGTTGGCCGACTACTTTCAAACCTATGT
TTTGGTTTTAAGGCCAGATTTCGTTATATGGAAGTACTCGATTTATTTTC
TCTGATCCCTATTTTTAAGGAGCATAAAATATTCTGCTTGTATACTTATT
GATTTTCAGatgaatttaaaataaaaagtaagatTAGAATCATTCAAGNA
GCAATGGCTCCACCACCACAACAGTATGGCCGAGGAGGGCCACCACCACC
AGGAATGATGGGAGGACCTCCACCCGGTATGAGACCTCCAGGAAACCCCA
ACTGGTAAAAGAAAACAGCTATGAATTTGAACTGGTAAAACAAATGGATA
ATAATCAGCAATAACTGTTCCTTGTGTAAGATAACAATATTTTAAGGATA
TTTCATGGAGCTGTTAGAGACatcaaaggtattttattgctAAATTATCA
ATATGAAAAAGGACATTCATTTTTATGCATactttttaactaaaatagtt
ACTCTTGGTAAGAGAAAGAGAAGCTGCGCTTTTGTTTTGTATTTAGGTCG
CGTGTCATGGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016835-exon-sc0000253-1491911889:25578..25600 | TCONS_00016835-exon-sc0000253-1491911889:25578..25600 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1510915933:25578..25600 | TCONS_00016835-exon-sc0000253-1510915933:25578..25600 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1575043694:25578..25600 | TCONS_00016835-exon-sc0000253-1575043694:25578..25600 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1491911889:37149..37812 | TCONS_00016835-exon-sc0000253-1491911889:37149..37812 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1510915933:37149..37812 | TCONS_00016835-exon-sc0000253-1510915933:37149..37812 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1575043694:37149..37812 | TCONS_00016835-exon-sc0000253-1575043694:37149..37812 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1491911889:38413..38690 | TCONS_00016835-exon-sc0000253-1491911889:38413..38690 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1510915933:38413..38690 | TCONS_00016835-exon-sc0000253-1510915933:38413..38690 | Clytia hemisphaerica | exon |
| TCONS_00016835-exon-sc0000253-1575043694:38413..38690 | TCONS_00016835-exon-sc0000253-1575043694:38413..38690 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253 | supercontig | sc0000253:25578..38690 + |
Blast
BLAST of TCONS_00016835 vs. Swiss-Prot (Human)
Match: RSMB (Small nuclear ribonucleoprotein-associated proteins B and B' OS=Homo sapiens GN=SNRPB PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.258e-43 Identity = 89/135 (65.93%), Postives = 96/135 (71.11%), Query Frame = 2
Query: 59 LGKSAKMLVHINYRMRCHLQDGRLFIGTFLAFDKHMNLILGDCDEFRKIKSKGGSEKGREEKRALGLVLLRGEHLVSMTVEAPPSKED---RNKTPAAKXXXXXXXXXXXXXXXXXPSMGAAPAGLAGPVRGVGG 454
+GKS+KML HI+YRMRC LQDGR+FIGTF AFDKHMNLIL DCDEFRKIK K + REEKR LGLVLLRGE+LVSMTVE PP K+ R A PG G G P M APAGLAGPVRGVGG
Sbjct: 3 VGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVP-MPQAPAGLAGPVRGVGG 136
The following BLAST results are available for this feature:
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