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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016571 ID=TCONS_00016571|Name=TCONS_00016571|organism=Clytia hemisphaerica|type=transcript|length=1411bp
TTAAGGTCTTGGGCCGCTAAATCAGGGCTTGGGCCGCTTACCTGCGCACA
GTTTGCGGGCGTTCACCTGCGCACAGTTTGCGGGCGTTCtgcgagcgttc
tcggctcaatcctcggaccgtaTTAAAAATGGAAGACTcagctgtgacag
atcatttcgatggaagttgttggaatgtttacaagactcttgacagaaaa
tgctttgttttattgtcaatgatgacagtgccgtttaattttgttagatc
tgatatattgatggttgtaagtgcactttacaGTTTtgatgttattagat
gctgttttagagctttagagctagcctacctagccggtggctgctcttgg
aGGACAACCCTGCCGGTACTGTTAATTTACCCCACTAAGATTCTCCTGAC
TTTTCTGGGAGTTTTCCCAGTAGAGGGGGTGCCCCCAGTGCACAAACGCC
AAACTCtatgagattggaaagggttttttcTAAAGGTATAGTATATTTTG
TCTAACTTTCTGAAGCTCATTTTTCTCAACAAACCTACCTGCCTCGACAC
ACTGGCGACTAGAGACGGACACTGGAGTCCTATAGTCTTTTTCATTCCTC
CGGTTGGCAAACAATATCCAATATATATATTATCCTCCAGGGATGCATGG
TCTcttattttacctttttttttgtaaattcctACCTTCTattctgattt
tctgactttctgagtTTCTAGCTAGCTAGCTAACTGTATCctactgtgaa
gtcgggtaacttgcatcagtggagggaaacttgcatagctatcaaatgac
tgaccaatcaaggcagcaaaatttcaaaacaaatgaactacgcagctccg
ctcgcagctctagtctaccatttttgtctTGACTTAACTTTGAATCActa
accagccaggtcattcatttgagggctattcATGTTAgcatccactgatg
caagttaccttaTCTCACGGtatgtatttttctgaaatttgcctgtATAT
ACCCGGTGAAATAGGTCTCCTCCTCAGGATCGAACAAATGCAAGCAATCT
TTGATTCGCAAACCCAATGCAATGCAAACAGCCTTATGTAAGTCCTGAAT
TTTAGCAAGGCTTGAAATAAAGATCTCAAGTGGGTCAGACAAAATAAAAT
GTCCGATCAGGAttgttttagcttgaaaattatgatttttgggtcgctat
ttttgaagctatttgggtcggaccttatttcgagccctgtttTAGGGCAA
AAAGTCTTGAGAAGCCTTATGTCCAACACATTTGGTTGATGGACATAGTA
GGGCATTTTAAAGcttgatttttgcttgaaacttgCTTAGTATATATGAA
GATTTTCAGTTCAATTCAATATAGCCTTCTGTCGAGCAAGCTATTAAAAC
CTCTTTTTAAC Run BLAST on NCBI transcript from alignment at sc0000243:39962..41372+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016571 ID=TCONS_00016571|Name=TCONS_00016571|organism=Clytia hemisphaerica|type=transcript|length=1411bp|location=Sequence derived from alignment at sc0000243:39962..41372+ (Clytia hemisphaerica)
TTAAGGTCTTGGGCCGCTAAATCAGGGCTTGGGCCGCTTACCTGCGCACA
GTTTGCGGGCGTTCACCTGCGCACAGTTTGCGGGCGTTCtgcgagcgttc
tcggctcaatcctcggaccgtaTTAAAAATGGAAGACTcagctgtgacag
atcatttcgatggaagttgttggaatgtttacaagactcttgacagaaaa
tgctttgttttattgtcaatgatgacagtgccgtttaattttgttagatc
tgatatattgatggttgtaagtgcactttacaGTTTtgatgttattagat
gctgttttagagctttagagctagcctacctagccggtggctgctcttgg
aGGACAACCCTGCCGGTACTGTTAATTTACCCCACTAAGATTCTCCTGAC
TTTTCTGGGAGTTTTCCCAGTAGAGGGGGTGCCCCCAGTGCACAAACGCC
AAACTCtatgagattggaaagggttttttcTAAAGGTATAGTATATTTTG
TCTAACTTTCTGAAGCTCATTTTTCTCAACAAACCTACCTGCCTCGACAC
ACTGGCGACTAGAGACGGACACTGGAGTCCTATAGTCTTTTTCATTCCTC
CGGTTGGCAAACAATATCCAATATATATATTATCCTCCAGGGATGCATGG
TCTcttattttacctttttttttgtaaattcctACCTTCTattctgattt
tctgactttctgagtTTCTAGCTAGCTAGCTAACTGTATCctactgtgaa
gtcgggtaacttgcatcagtggagggaaacttgcatagctatcaaatgac
tgaccaatcaaggcagcaaaatttcaaaacaaatgaactacgcagctccg
ctcgcagctctagtctaccatttttgtctTGACTTAACTTTGAATCActa
accagccaggtcattcatttgagggctattcATGTTAgcatccactgatg
caagttaccttaTCTCACGGtatgtatttttctgaaatttgcctgtATAT
ACCCGGTGAAATAGGTCTCCTCCTCAGGATCGAACAAATGCAAGCAATCT
TTGATTCGCAAACCCAATGCAATGCAAACAGCCTTATGTAAGTCCTGAAT
TTTAGCAAGGCTTGAAATAAAGATCTCAAGTGGGTCAGACAAAATAAAAT
GTCCGATCAGGAttgttttagcttgaaaattatgatttttgggtcgctat
ttttgaagctatttgggtcggaccttatttcgagccctgtttTAGGGCAA
AAAGTCTTGAGAAGCCTTATGTCCAACACATTTGGTTGATGGACATAGTA
GGGCATTTTAAAGcttgatttttgcttgaaacttgCTTAGTATATATGAA
GATTTTCAGTTCAATTCAATATAGCCTTCTGTCGAGCAAGCTATTAAAAC
CTCTTTTTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016571-exon-sc0000243-1491911889:39962..41372 | TCONS_00016571-exon-sc0000243-1491911889:39962..41372 | Clytia hemisphaerica | exon |
| TCONS_00016571-exon-sc0000243-1510915933:39962..41372 | TCONS_00016571-exon-sc0000243-1510915933:39962..41372 | Clytia hemisphaerica | exon |
| TCONS_00016571-exon-sc0000243-1575043694:39962..41372 | TCONS_00016571-exon-sc0000243-1575043694:39962..41372 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000243 | supercontig | sc0000243:39962..41372 + |
Blast
The following BLAST results are available for this feature:
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