TCONS_00016252 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016252
Unique NameTCONS_00016252
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2872

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016252 ID=TCONS_00016252|Name=TCONS_00016252|organism=Clytia hemisphaerica|type=transcript|length=2872bp
ACGCTCTTCACAATTTTTTGTGTGTGTTTGTAGTTTATGTGTAATGTTGC
TAACAAATAGAGAGGCGTATGTTAATCAGCAGAAAATATATGAAATCATC
ATAgcgatgtttttgaaaatttgagaaaagcTTGTACTGCAGTAGTCGAT
AAAACATGAGGTTGAGCAACCATTTTATGGTTTTGTGCTTTATGTTGAGC
ACCGCTCACAGTGACTATGCGCCATATTGGATTTACGGTTTGTTTTCAAT
GTCGTCATGTGACAGTCGTTTTCCGTTCAGCTGTTCGAATGCGATCGCAA
ATCAACAACTGATGGACCTTACTATAGAGAAAAACAATGGAATACTGAAA
ACCAAAATGGATTTTTGTGCTCAAGACGTCGGACACAGTCAACGAAAGAT
GTTAAATTCACTTTTACCAGGACTTTTCAAAGGTAGTTTTAACTTAACTG
GAAATTGTATAAATCCAACAATGACTGGAGTTCACCAGAACAAAGCACTG
TTTGTTTACACTCATGTGACCTTTGAGCTTACGCAACTTGTTAGTTCAAT
CTTATTACCATTTGACATCCCACTTCTGGCGATCACCTATCAGCAAATCT
ATCCAGCCTCATTCCTAGCCAATCCTCTCTACGTCTATAGTTACGAGGCT
AGTTTCGGACAGGAAATTCATAAAACGGGGATCAACAATTTCAGAAAACA
ACTGAACATTACTATAGCCGCTGTATTGAACCTAATTGAGCCAGATGAGT
CAGCCAAAATCCAATCCAATAGAACGACATGCGACCCTGAAGACCAAGGA
GCATTCTGTACGTACGTTGGATTGGAAATATCAGACTCTTGTATGAAAGA
GAGATCTGTAGCCGTCAGCGATGATCATGACTTGAATCGAACTTTGGAAA
TCATTCTTCACACTGAACGATTATCGTTCATCCTCATACAAGGACCAAGC
CATCTACAAACagaatttcaagtcaaaatgcAAAGCTGGAAAAGACAGGA
TAAACGTTTACAAAatctattttttatcaattttgaaatcattgatGAGA
ACCCATCCAGTGAAGTGACGAGTCTAGCCAAAGGGAGGTATGGCGATGGT
TTCAAATCCTTTGATAATATTTACAATCTACCAGGAGCCTTGGGATTGAA
TACGTTGGTTCACTATCTGCACCatttaaaagctcattttctaACCAGAA
AATTCTTTGAAAGCGTTGACAAATTTTACGATATAAACTTGATAGCGAAG
GCACTGATAAATATTGATCCAGGGAAATACAAAATACTGAAATGGCTTAA
ACTCAAGCCAAAGTATTGGGACAGAATCCCCACAAAAGCGAAAAATCAAG
TCTTCGAAGCGTTAAAACATAGCAAGCAAATTATCACAgcttatttgaaa
ttttggagagCTGTTTTCTATGTTAACTTAATCGAGATTGAGAAAGTGTA
TCGGACTTATCTCTTTGACCCACGAAATGCTTTGAAAGCGCAACCGGTCT
GTAGATTAACTATACCGCAATGCGGGAAAGGAACTTATCTAAGCCACTCC
TATTACGCAGAAGTAAACTGGACTCGAAGTTTCGGTTACCATTGCCTCTA
TTGTCCAAACGGTTTCTTTAAACCCGAATCAGGGAATACGGAATGTATCC
AGTGTCCAAAATACCATTTGAGTTCGCCAGACAGGAAATCTTGCTACGAC
CCTTATACGACAGTCTACTTATCATTCGGGAAATCAGACTCATTGCTGGT
ATACGCTATCATCTCATCGTTTCATGGACTCTTCATACTCTTAACATTCG
TTACTTTCCACAGAAATCAATTCACACCTCTGGTGAGAGCGTCACAAAAG
AGTATTTCCTATTTCCAAATCGCTACTCATATTTTACTGACCTTTATACC
GTTATGGTTGTTCGAAGGAGCGCCAAATACAGCAAAATGCATTGCGAGAC
CTATATCGATTGGCATACTTTTCTCTATAACAACGTCTATCAACCTTGGT
AAAACACAGAAAGTGTTACGTATCTTCGGCACCCAATTGCGCATGTCACG
TAAGGATATTATAGTAACAAGAGCAACAGAGATTTTTGTTGTGATATTTG
TAGTGCTTCTAGACGGAGGCGTTCTGGTGGTGACTATGGCGGGGAGAGGT
GATATCGGGATGCAGGTTACACATTACAAGGACACTCTACAAAAGGAATA
TCACTGCAGCAATAATACGGCAGTACTGATTCAATACGCTTTTATACTGA
TCGTTATAATTACAAACNCACTCTACAAAAGGAATATCACTGCAGCAATA
ATACGGCAGTACTGATTCAATACGCTTTTATATTGATCGTTATAATTACA
AACGCTATACAAGGGATACGTGCACGTAAGCTACCGTCGTATTACCGTGA
AACCGTTTACGTCATCTACGCTTCTTTTACGTCGAGTGTCGTTATTATAG
CCTCGTTGGCTTTATATCTTTCACAGTCTAGTGAAAATGCACGGACGGTA
GTTTTGTTGATCACGTGTTTGATTCTGAATATTGAACACTTTGCATTGGT
TTACGTATACAAACTTTACGTGTTACTTTTACGCCGTGATATCAACCGTT
CTTCCGTTTTCCGTAGGGAAAGGCAGAAGAAGATTAATGACattttggta
caacactgattATTGAAGATCgttttaatttgattcttaggataaattga
aaaaataattatattaaaaTTCACCAATTTCGCGTCTTTCTATTCCACTC
ATCAAAGCTATTTGAAATACAAGctttttgtttctattttcaCACACAAG
AGAGGTGGggaatgaaaaaaacttttttcataaaaggCTTGAATAACATA
TTACGTGAATTTTAAGAAAGCT
Run BLAST on NCBI

protein sequence of TCONS_00016252-protein

>TCONS_00016252-protein ID=TCONS_00016252-protein|Name=TCONS_00016252-protein|organism=Clytia hemisphaerica|type=polypeptide|length=719bp
MRLSNHFMVLCFMLSTAHSDYAPYWIYGLFSMSSCDSRFPFSCSNAIANQ
QLMDLTIEKNNGILKTKMDFCAQDVGHSQRKMLNSLLPGLFKGSFNLTGN
CINPTMTGVHQNKALFVYTHVTFELTQLVSSILLPFDIPLLAITYQQIYP
ASFLANPLYVYSYEASFGQEIHKTGINNFRKQLNITIAAVLNLIEPDESA
KIQSNRTTCDPEDQGAFCTYVGLEISDSCMKERSVAVSDDHDLNRTLEII
LHTERLSFILIQGPSHLQTEFQVKMQSWKRQDKRLQNLFFINFEIIDENP
SSEVTSLAKGRYGDGFKSFDNIYNLPGALGLNTLVHYLHHLKAHFLTRKF
FESVDKFYDINLIAKALINIDPGKYKILKWLKLKPKYWDRIPTKAKNQVF
EALKHSKQIITAYLKFWRAVFYVNLIEIEKVYRTYLFDPRNALKAQPVCR
LTIPQCGKGTYLSHSYYAEVNWTRSFGYHCLYCPNGFFKPESGNTECIQC
PKYHLSSPDRKSCYDPYTTVYLSFGKSDSLLVYAIISSFHGLFILLTFVT
FHRNQFTPLVRASQKSISYFQIATHILLTFIPLWLFEGAPNTAKCIARPI
SIGILFSITTSINLGKTQKVLRIFGTQLRMSRKDIIVTRATEIFVVIFVV
LLDGGVLVVTMAGRGDIGMQVTHYKDTLQKEYHCSNNTAVLIQYAFILIV
IITNXLYKRNITAAIIRQY
Run BLAST on NCBI

transcript from alignment at sc0000232:74594..77521+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016252 ID=TCONS_00016252|Name=TCONS_00016252|organism=Clytia hemisphaerica|type=transcript|length=2928bp|location=Sequence derived from alignment at sc0000232:74594..77521+ (Clytia hemisphaerica)
ACGCTCTTCACAATTTTTTGTGTGTGTTTGTAGTTTATGTGTAATGTTGC TAACAAATAGAGAGGCGTATGTTAATCAGCAGAAAATATATGAAATCATC ATAgcgatgtttttgaaaatttgagaaaagcTTGTACTGCAGTAGTCGAT AAAACATGAGGTTGAGCAACCATTTTATGGTTTTGTGCTTTATGTTGAGC ACCGCTCACAGTGACTATGCGCCATATTGGATTTACGGTTTGTTTTCAAT GTCGTCATGTGACAGTCGTTTTCCGTTCAGCTGTTCGAATGCGATCGCAA ATCAACAACTGATGGACCTTACTATAGAGAAAAACAATGGAATACTGAAA ACCAAAATGGATTTTTGTGCTCAAGACGTCGGACACAGTCAACGAAAGAT GTTAAATTCACTTTTACCAGGACTTTTCAAAGGTAGTTTTAACTTAACTG GAAATTGTATAAATCCAACAATGACTGGAGTTCACCAGAACAAAGCACTG TTTGTTTACACTCATGTGACCTTTGAGCTTACGCAACTTGTTAGTTCAAT CTTATTACCATTTGACATCCCACTTCTGGCGATCACCTATCAGCAAATCT ATCCAGCCTCATTCCTAGCCAATCCTCTCTACGTCTATAGTTACGAGGCT AGTTTCGGACAGGAAATTCATAAAACGGGGATCAACAATTTCAGAAAACA ACTGAACATTACTATAGCCGCTGTATTGAACCTAATTGAGCCAGATGAGT CAGCCAAAATCCAATCCAATAGAACGACATGCGACCCTGAAGACCAAGGA GCATTCTGTACGTACGTTGGATTGGAAATATCAGACTCTTGTATGAAAGA GAGATCTGTAGCCGTCAGCGATGATCATGACTTGAATCGAACTTTGGAAA TCATTCTTCACACTGAACGATTATCGTTCATCCTCATACAAGGACCAAGC CATCTACAAACagaatttcaagtcaaaatgcAAAGCTGGAAAAGACAGGA TAAACGTTTACAAAatctattttttatcaattttgaaatcattgatGAGA ACCCATCCAGTGAAGTGACGAGTCTAGCCAAAGGGAGGTATGGCGATGGT TTCAAATCCTTTGATAATATTTACAATCTACCAGGAGCCTTGGGATTGAA TACGTTGGTTCACTATCTGCACCatttaaaagctcattttctaACCAGAA AATTCTTTGAAAGCGTTGACAAATTTTACGATATAAACTTGATAGCGAAG GCACTGATAAATATTGATCCAGGGAAATACAAAATACTGAAATGGCTTAA ACTCAAGCCAAAGTATTGGGACAGAATCCCCACAAAAGCGAAAAATCAAG TCTTCGAAGCGTTAAAACATAGCAAGCAAATTATCACAgcttatttgaaa ttttggagagCTGTTTTCTATGTTAACTTAATCGAGATTGAGAAAGTGTA TCGGACTTATCTCTTTGACCCACGAAATGCTTTGAAAGCGCAACCGGTCT GTAGATTAACTATACCGCAATGCGGGAAAGGAACTTATCTAAGCCACTCC TATTACGCAGAAGTAAACTGGACTCGAAGTTTCGGTTACCATTGCCTCTA TTGTCCAAACGGTTTCTTTAAACCCGAATCAGGGAATACGGAATGTATCC AGTGTCCAAAATACCATTTGAGTTCGCCAGACAGGAAATCTTGCTACGAC CCTTATACGACAGTCTACTTATCATTCGGGAAATCAGACTCATTGCTGGT ATACGCTATCATCTCATCATTTCATGGACTCTTCATACTCTTAACATTCA TGNGGTATACGCTATCATCTCATCGTTTCATGGACTCTTCATACTCTTAA CATTCGTTACTTTCCACAGAAATCAATTCACACCTCTGGTGAGAGCGTCA CAAAAGAGTATTTCCTATTTCCAAATCGCTACTCATATTTTACTGACCTT TATACCGTTATGGTTGTTCGAAGGAGCGCCAAATACAGCAAAATGCATTG CGAGACCTATATCGATTGGCATACTTTTCTCTATAACAACGTCTATCAAC CTTGGTAAAACACAGAAAGTGTTACGTATCTTCGGCACCCAATTGCGCAT GTCACGTAAGGATATTATAGTAACAAGAGCAACAGAGATTTTTGTTGTGA TATTTGTAGTGCTTCTAGACGGAGGCGTTCTGGTGGTGACTATGGCGGGG AGAGGTGATATCGGGATGCAGGTTACACATTACAAGGACACTCTACAAAA GGAATATCACTGCAGCAATAATACGGCAGTACTGATTCAATACGCTTTTA TACTGATCGTTATAATTACAAACNCACTCTACAAAAGGAATATCACTGCA GCAATAATACGGCAGTACTGATTCAATACGCTTTTATATTGATCGTTATA ATTACAAACGCTATACAAGGGATACGTGCACGTAAGCTACCGTCGTATTA CCGTGAAACCGTTTACGTCATCTACGCTTCTTTTACGTCGAGTGTCGTTA TTATAGCCTCGTTGGCTTTATATCTTTCACAGTCTAGTGAAAATGCACGG ACGGTAGTTTTGTTGATCACGTGTTTGATTCTGAATATTGAACACTTTGC ATTGGTTTACGTATACAAACTTTACGTGTTACTTTTACGCCGTGATATCA ACCGTTCTTCCGTTTTCCGTAGGGAAAGGCAGAAGAAGATTAATGACatt ttggtacaacactgattATTGAAGATCgttttaatttgattcttaggata aattgaaaaaataattatattaaaaTTCACCAATTTCGCGTCTTTCTATT CCACTCATCAAAGCTATTTGAAATACAAGctttttgtttctattttcaCA CACAAGAGAGGTGGggaatgaaaaaaacttttttcataaaaggCTTGAAT AACATATTACGTGAATTTTAAGAAAGCT

Coding sequence (CDS) from alignment at sc0000232:74594..77521+

>TCONS_00016252 ID=TCONS_00016252|Name=TCONS_00016252|organism=Clytia hemisphaerica|type=CDS|length=4320bp|location=Sequence derived from alignment at sc0000232:74594..77521+ (Clytia hemisphaerica)
ATGAGGTTGAGCAACCATTTTATGGTTTTGTGCTTTATGTTGAGCACCGC
TCACAGTGACTATGCGCCATATTGGATTTACGGTTTGTTTTCAATGTCGT
CATGTGACAGTCGTTTTCCGTTCAGCTGTTCGAATGCGATCGCAAATCAA
CAACTGATGGACCTTACTATAGAGAAAAACAATGGAATACTGAAAACCAA
AATGGATTTTTGTGCTCAAGACGTCGGACACAGTCAACGAAAGATGTTAA
ATTCACTTTTACCAGGACTTTTCAAAGGTAGTTTTAACTTAACTGGAAAT
TGTATAAATCCAACAATGACTGGAGTTCACCAGAACAAAGCACTGTTTGT
TTACACTCATGTGACCTTTGAGCTTACGCAACTTGTTAGTTCAATCTTAT
TACCATTTGACATCCCACTTCTGGCGATCACCTATCAGCAAATCTATCCA
GCCTCATTCCTAGCCAATCCTCTCTACGTCTATAGTTACGAGGCTAGTTT
CGGACAGGAAATTCATAAAACGGGGATCAACAATTTCAGAAAACAACTGA
ACATTACTATAGCCGCTGTATTGAACCTAATTGAGCCAGATGAGTCAGCC
AAAATCCAATCCAATAGAACGACATGCGACCCTGAAGACCAAGGAGCATT
CTGTACGTACGTTGGATTGGAAATATCAGACTCTTGTATGAAAGAGAGAT
CTGTAGCCGTCAGCGATGATCATGACTTGAATCGAACTTTGGAAATCATT
CTTCACACTGAACGATTATCGTTCATCCTCATACAAGGACCAAGCCATCT
ACAAACagaatttcaagtcaaaatgcAAAGCTGGAAAAGACAGGATAAAC
GTTTACAAAatctattttttatcaattttgaaatcattgatGAGAACCCA
TCCAGTGAAGTGACGAGTCTAGCCAAAGGGAGGTATGGCGATGGTTTCAA
ATCCTTTGATAATATTTACAATCTACCAGGAGCCTTGGGATTGAATACGT
TGGTTCACTATCTGCACCatttaaaagctcattttctaACCAGAAAATTC
TTTGAAAGCGTTGACAAATTTTACGATATAAACTTGATAGCGAAGGCACT
GATAAATATTGATCCAGGGAAATACAAAATACTGAAATGGCTTAAACTCA
AGCCAAAGTATTGGGACAGAATCCCCACAAAAGCGAAAAATCAAGTCTTC
GAAGCGTTAAAACATAGCAAGCAAATTATCACAgcttatttgaaattttg
gagagCTGTTTTCTATGTTAACTTAATCGAGATTGAGAAAGTGTATCGGA
CTTATCTCTTTGACCCACGAAATGCTTTGAAAGCGCAACCGGTCTGTAGA
TTAACTATACCGCAATGCGGGAAAGGAACTTATCTAAGCCACTCCTATTA
CGCAGAAGTAAACTGGACTCGAAGTTTCGGTTACCATTGCCTCTATTGTC
CAAACGGTTTCTTTAAACCCGAATCAGGGAATACGGAATGTATCCAGTGT
CCAAAATACCATTTGAGTTCGCCAGACAGGAAATCTTGCTACGACCCTTA
TACGACAGTCTACTTATCATTCGGGAAATCAGACTCATTGCTGGTATACG
CTATCATCTCATCGTTTCATGGACTCTTCATACTCTTAACATTCGTTACT
TTCCACAGAAATCAATTCACACCTCTGGTGAGAGCGTCACAAAAGAGTAT
TTCCTATTTCCAAATCGCTACTCATATTTTACTGACCTTTATACCGTTAT
GGTTGTTCGAAGGAGCGCCAAATACAGCAAAATGCATTGCGAGACCTATA
TCGATTGGCATACTTTTCTCTATAACAACGTCTATCAACCTTGGTAAAAC
ACAGAAAGTGTTACGTATCTTCGGCACCCAATTGCGCATGTCACGTAAGG
ATATTATAGTAACAAGAGCAACAGAGATTTTTGTTGTGATATTTGTAGTG
CTTCTAGACGGAGGCGTTCTGGTGGTGACTATGGCGGGGAGAGGTGATAT
CGGGATGCAGGTTACACATTACAAGGACACTCTACAAAAGGAATATCACT
GCAGCAATAATACGGCAGTACTGATTCAATACGCTTTTATACTGATCGTT
ATAATTACAAACNCACTCTACAAAAGGAATATCACTGCAGCAATAATACG
GCAGTACTGAATGAGGTTGAGCAACCATTTTATGGTTTTGTGCTTTATGT
TGAGCACCGCTCACAGTGACTATGCGCCATATTGGATTTACGGTTTGTTT
TCAATGTCGTCATGTGACAGTCGTTTTCCGTTCAGCTGTTCGAATGCGAT
CGCAAATCAACAACTGATGGACCTTACTATAGAGAAAAACAATGGAATAC
TGAAAACCAAAATGGATTTTTGTGCTCAAGACGTCGGACACAGTCAACGA
AAGATGTTAAATTCACTTTTACCAGGACTTTTCAAAGGTAGTTTTAACTT
AACTGGAAATTGTATAAATCCAACAATGACTGGAGTTCACCAGAACAAAG
CACTGTTTGTTTACACTCATGTGACCTTTGAGCTTACGCAACTTGTTAGT
TCAATCTTATTACCATTTGACATCCCACTTCTGGCGATCACCTATCAGCA
AATCTATCCAGCCTCATTCCTAGCCAATCCTCTCTACGTCTATAGTTACG
AGGCTAGTTTCGGACAGGAAATTCATAAAACGGGGATCAACAATTTCAGA
AAACAACTGAACATTACTATAGCCGCTGTATTGAACCTAATTGAGCCAGA
TGAGTCAGCCAAAATCCAATCCAATAGAACGACATGCGACCCTGAAGACC
AAGGAGCATTCTGTACGTACGTTGGATTGGAAATATCAGACTCTTGTATG
AAAGAGAGATCTGTAGCCGTCAGCGATGATCATGACTTGAATCGAACTTT
GGAAATCATTCTTCACACTGAACGATTATCGTTCATCCTCATACAAGGAC
CAAGCCATCTACAAACagaatttcaagtcaaaatgcAAAGCTGGAAAAGA
CAGGATAAACGTTTACAAAatctattttttatcaattttgaaatcattga
tGAGAACCCATCCAGTGAAGTGACGAGTCTAGCCAAAGGGAGGTATGGCG
ATGGTTTCAAATCCTTTGATAATATTTACAATCTACCAGGAGCCTTGGGA
TTGAATACGTTGGTTCACTATCTGCACCatttaaaagctcattttctaAC
CAGAAAATTCTTTGAAAGCGTTGACAAATTTTACGATATAAACTTGATAG
CGAAGGCACTGATAAATATTGATCCAGGGAAATACAAAATACTGAAATGG
CTTAAACTCAAGCCAAAGTATTGGGACAGAATCCCCACAAAAGCGAAAAA
TCAAGTCTTCGAAGCGTTAAAACATAGCAAGCAAATTATCACAgcttatt
tgaaattttggagagCTGTTTTCTATGTTAACTTAATCGAGATTGAGAAA
GTGTATCGGACTTATCTCTTTGACCCACGAAATGCTTTGAAAGCGCAACC
GGTCTGTAGATTAACTATACCGCAATGCGGGAAAGGAACTTATCTAAGCC
ACTCCTATTACGCAGAAGTAAACTGGACTCGAAGTTTCGGTTACCATTGC
CTCTATTGTCCAAACGGTTTCTTTAAACCCGAATCAGGGAATACGGAATG
TATCCAGTGTCCAAAATACCATTTGAGTTCGCCAGACAGGAAATCTTGCT
ACGACCCTTATACGACAGTCTACTTATCATTCGGGAAATCAGACTCATTG
CTGGTATACGCTATCATCTCATCGTTTCATGGACTCTTCATACTCTTAAC
ATTCGTTACTTTCCACAGAAATCAATTCACACCTCTGGTGAGAGCGTCAC
AAAAGAGTATTTCCTATTTCCAAATCGCTACTCATATTTTACTGACCTTT
ATACCGTTATGGTTGTTCGAAGGAGCGCCAAATACAGCAAAATGCATTGC
GAGACCTATATCGATTGGCATACTTTTCTCTATAACAACGTCTATCAACC
TTGGTAAAACACAGAAAGTGTTACGTATCTTCGGCACCCAATTGCGCATG
TCACGTAAGGATATTATAGTAACAAGAGCAACAGAGATTTTTGTTGTGAT
ATTTGTAGTGCTTCTAGACGGAGGCGTTCTGGTGGTGACTATGGCGGGGA
GAGGTGATATCGGGATGCAGGTTACACATTACAAGGACACTCTACAAAAG
GAATATCACTGCAGCAATAATACGGCAGTACTGATTCAATACGCTTTTAT
ACTGATCGTTATAATTACAAACNCACTCTACAAAAGGAATATCACTGCAG
CAATAATACGGCAGTACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009082XLOC_009082Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016252-proteinTCONS_00016252-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016252-exon-sc0000232-1491911889:74594..76341TCONS_00016252-exon-sc0000232-1491911889:74594..76341Clytia hemisphaericaexon
TCONS_00016252-exon-sc0000232-1510915933:74594..76341TCONS_00016252-exon-sc0000232-1510915933:74594..76341Clytia hemisphaericaexon
TCONS_00016252-exon-sc0000232-1575043694:74594..76341TCONS_00016252-exon-sc0000232-1575043694:74594..76341Clytia hemisphaericaexon
TCONS_00016252-exon-sc0000232-1491911889:76398..77521TCONS_00016252-exon-sc0000232-1491911889:76398..77521Clytia hemisphaericaexon
TCONS_00016252-exon-sc0000232-1510915933:76398..77521TCONS_00016252-exon-sc0000232-1510915933:76398..77521Clytia hemisphaericaexon
TCONS_00016252-exon-sc0000232-1575043694:76398..77521TCONS_00016252-exon-sc0000232-1575043694:76398..77521Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000232supercontigsc0000232:74594..77521 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.9391e-09 3.76015e-08 4.55911e-09 5.37561e-08 4.5062 1.89503 1.13426 3.04221 1.79663 5.55217 0.265553 1.12605 1.57093 0.924503 0 0.159777 1.17161 0.204565 1.86353 0.921824 0 0 2.90764e-07 0 1.15782 0.612756 0.473691 2.1012 2.31804e-08 3.28346e-07
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000337GPCR_3
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR017978GPCR_3_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016252 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top