TCONS_00016231 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016231
Unique NameTCONS_00016231
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1711

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016231 ID=TCONS_00016231|Name=TCONS_00016231|organism=Clytia hemisphaerica|type=transcript|length=1711bp
ATCTCTAATCATgctctttttttcatttctagtgtttaaataatataaaa
aattagaacataaatttttcaaaacaataaccATGAGCTCAAAACAGACT
GGAGTGGGTCAAATTCTAAGCACAGGGTCAGAAAAAGAAGAATCAAGCCA
AGAGAATGCAAAAAATAGTAAAGTTGAGGTAGCCACACAAGGAGAAGACA
GGATATTGAATACATTGAAAAAGAGCGAAAAGGAGAAATTGCAAGCTTGT
TTGGATAAAGAAGGAAGTCATCTAAAAAACTGGAGGCAAGTAGTGgataa
aattttcgaaaatgacGAAGATAATAGTAAAGCAATTGAAATAAAAGCTA
CTATTGAAAACATACGGTTTGGTGGGGGTGCTGCTGGAGGGTTTTTGAAG
AAGCTAGAACAGAAGTTGCCTGATCTTACGGTTGGTACTCTAAATGAAAT
ATGTAAAGAGGAGGGCAGGAATGATATTGTTAAAGATTTGAAACGTTTTA
AAGAACagcaaaaattgtttgaagttttggaTGCAGACGATATAAGTAAG
TTGAATGTTAAAATGGATGATGATGAATTTTGTTTGATTGTAGCGGAATC
CGAAATATTGGAGAAAGTGGCACACCACTTCGGCATCAAGGGTACTTTGT
TCTCTCAACATGAAAAAGATAATATTAAAGCCATTGGTCCGGGAAAATTT
CAAAGCTGCACCGTGAGTTTATTGGATATTTTGAATAGAGAAAGATCAGA
TATGACTGTAAAAGAATTAGCTAAAATTTGTGAAGCGTTACGAATCAACG
ATGCAAAAGATGCTTTGCTTAAATTGCTTCATAAATAACATACTGTTTAT
GATTTTATGTGTTTATAGTACATTAGTATTTCTTACATGCACCCACACTG
AGATAACAAAATTTGTATACCTCTGTTAGGGATAAcgtaaaataattttg
aaatacaccaaaccgtatacacgcttttttttataaagaatatCCTCtct
aagaatatcagggtgaaaattggccaaatcgtaagaataccctaagaata
ttATAGAGcgagtttcacagaatttgataagaatacaatcattttgtatt
tggttaacagaaaaaaaactgCTTCTCTTGTTAGACTTAAGATTTAAACT
TTGATGTAGAAGTGTAATTTTTGCTCCTAATGTGCACTCAAAAGTCCCAA
ACTGTCAAATTGATCGCAGTGATGCAGAAAAAGTTTTAGTGAAATTGCTT
TAGCGAATAACTATTTATGATTTTTAGTGCTGTCCTCATAACTCGgacga
atgtctccttaactcgaacaagtcgTCTTATCccttaaagtttttatttt
acataagtgttcccgtttcatatcagacacatatcatgacagtgtctgcc
tattgttatattatgctgatataaacaagaaatgtttttctcttcctctt
tctgatcatCTTGTTCCACATGTCATCCGtgccaatccaatgtgaaaacg
cttgtaaattaaaactgATGATTAAGCAAGtgatatcactcttatctaaa
aacaaaacctttaacatcccTTACCTGTCTTAATATTTGCGTCTCCCTCT
TACGGGTCCGAGTTTTGAAGACTTCACTGTGATAcacataaatatttttt
acatgCACCACTTTATATTTAGCTTTTACCAATTgttattttatgaattt
ttatcattttg
Run BLAST on NCBI

protein sequence of TCONS_00016231-protein

>TCONS_00016231-protein ID=TCONS_00016231-protein|Name=TCONS_00016231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=251bp
MSSKQTGVGQILSTGSEKEESSQENAKNSKVEVATQGEDRILNTLKKSEK
EKLQACLDKEGSHLKNWRQVVDKIFENDEDNSKAIEIKATIENIRFGGGA
AGGFLKKLEQKLPDLTVGTLNEICKEEGRNDIVKDLKRFKEQQKLFEVLD
ADDISKLNVKMDDDEFCLIVAESEILEKVAHHFGIKGTLFSQHEKDNIKA
IGPGKFQSCTVSLLDILNRERSDMTVKELAKICEALRINDAKDALLKLLH
K
Run BLAST on NCBI

transcript from alignment at sc0000231:383272..389213-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016231 ID=TCONS_00016231|Name=TCONS_00016231|organism=Clytia hemisphaerica|type=transcript|length=5942bp|location=Sequence derived from alignment at sc0000231:383272..389213- (Clytia hemisphaerica)
ATCTCTAATCATGCTCTTTTTTTCATTTCTAGTGTTTAAATAATATAAAA
AATTAGAACATAAATTTTTCAAAACAATAACCATGAGCTCAAAACAGAGT
AAGTATCCAAGTATCTATAGTTACTTTAAGGGCAGAAAGTTTCGCGAAGT
CAAAAAGTCGCGAAATTTAGCGAATTTAAGTTTCGCGAATTATGGTTTTC
GCGAATTCATATAAAATTTACCTTTTTTGGTAACAAAAACTCATAAAACA
CGCAAAAATTTAGCAAACAGTGAAAAACTGAGTAGTAAAGTTTATTTTTC
GCAAAAAAAACTTTCGTGGTTTTCAGGTTTAATTTCTTACCTGGCAGAAA
CTTTCGCGAAAAAGGATCAAAATCGTGAAAGTTTCTGCCCGCGAAAGTTT
CTGCCCTTAAAGTAATTCGACTTTTAAAATACTTAATTTTCATTGATCAT
TCTAGACAGCAGTTTTAAGCACAAGGAAATTTGGAATCTAGAATTTCGTA
GCTCGCAATTCGCTCATGTGTGCATCGTTCTTTGGTATACAGACACAGAT
GTATAGTCTTTCCAATAAAGATCAATTTTCTATTCCCTATAATGAAAAAT
AATGATGATACATATAATTATGCTATACGTTGTTTTTGTTTTTTCGGATT
TGCGGCCACCAATGCTAAAGCCCTAAAGTAATAGACCAATTTCCCATCCA
AAAGAAATGATAGTCGGCCTTTGATGTGCCGCATCCCCAGTCAACTACCC
TTGCGCATAAACCTTAAAATATTCCGAAAGCGAGGGCTTCCCACAGCAAA
AATCCTCTGGGTTATCTGCATCTGGGTGGAGAAAAATTTTCTAAGAATAA
TTAGGCTCATAGACTCCTTAAGAAGAATTTCAGAACGAAGCTGACCCCGC
ATTGCCTCAACAAAAAAAGTTTGTCGGATCTTAGAAAAAAAGAGTGTAGT
ACAAATTTGAATTGTTTTTTTTTTATCATGATTTTTGAACAGATCTTCCA
ACACAATGTTCAAGCTCAACAGTCACAATAACAACAACTACCAAAAATCT
TTTTCGTATGTAAATTATTCCAGTGCCTTTCCCTGTATAGTTTAAATAAT
TATCATTTGTCAAATGCTTTCCAAAAAATAAAGCGTACCTGTGATTAGGC
TGCTGGCATCCACTAACGGATTGCTGCTCCTTATATACTACCTGCAGTTG
AAAAATCGCTTATTTTCCTTCCAAACAAGAGTTGTAGCACGCCTTTTAAC
TGCATTTCTATTATTTTTTTAGCTGGAGTGGGTCAAATTCTAAGCACAGG
TATAAATTTTGACTATAATATTTAAAAGTGAAAAAATCAGGGGACATTTA
CTTTGACGATGATGCTATACACGATTTTTTTAGAATTTCGACCGGGACTT
AAGTGGGATAAGTGACTATCATTCCTCATCCTACAAAACCTTTGCTTCAA
TATTTAATCCCCGGCAGAATTTATGTGTTGATACACTATATTGAGCAAAA
GCCATACTGAAAACTAAAGACCATAATATTTTATTTATGAGTAATACCGG
GTGACTCACGAAAAAGTATAAGAGTTTGGAGGGTAACTGTGTCCGAAAAA
AATTGAATTTTAACTAAATTCTTTTTTCATGGTAAAGAGGAAAGGCAAAC
TTAAATTTTGATGTATCATTTTTTAATTTTGGAAAAGTAGTTATCGAGAT
ATGGAGGTATAAAGTCAAAAGTCATTATAAAAACAGTATCTCGATAACTC
TTATACTTTTTCGTGGGTCACCCGGTAGATTTCAAATGATTTTCTTGTCG
ACTTAGATGCTTTCAAATACTCTGTCGGCTTTGAATTGTTGGCTTCGAGG
CATAGTGCTGACAGTTCCATTTTTTCACCATGCTTTTGCTCATTCATTTT
TTTTAGGGTCAGAAAAAGAAGAATCAAGCCAAGAGAATGCAAAAAATAGT
AAAGGTATACTAGTATACCTATATTAACACATTCAATTGTTAAAACTGGT
TGAAAACAAAATCTTCTGAACTTCTTTTCTAAGAACCTACTTTCTCATAG
TCTCCTCTAATATAACGAATAAAGTTTGGCTCAAAAATATGCGAACACCG
TTGTACACCGTTCGAAAGATATTTTCAAGGAGGACACTCTAAAGGATTAA
TTTTTTTGAAAACTTGAAAATTGAAAAAGAAAAATAAAGATGAAAAAAAG
AAGATTCTTCCGTTTCAAATATCATGACATTAATTTTATAAGGATTATTG
GAACTTTACAAACTTCGAAAATGTGTTCTAATTTTTCGTGTTAGATAAAA
AGTTTGAAGTAGCTCATTTTAACTGTTTTTGGTCATTTTTGGCCGTCTTA
TGCCCACTTTAAAGACTTATTTTCCAGCTGAACAATCAACTGACGAAACG
CGCAATCTTGTCTGGTTTAAAAACTACAGTGCTTTTTCAAATCAATCACT
ATGTTTATTATCGATACAGACTTCGCCAATAAACTGTCAATCATTAAAAA
GCGGTTTTGATTCTTTAAAAATTCATATTACTCGTGAAATAGAACTTCTT
TTGTTAAATCGACTGATCTCTGAATAGTTGACTGGATTGTGCTTTCCATA
TTAAAGGAAGCGTGTCTTGTTTTCAATACACAAATTTCCTATTAGCAGAT
TCATGTAAAAACGTCACGAAAAAATCAAAGAGTAAAGTTATGATTGGCTG
AGACATGATTACCGCATGCTTTCGACACTTAAAAGAAAAAATATCTTATC
TGTTCAGAGCTTTACATGTTTTTTTTNTGGATTGTGCTTTCCATATTAAA
GGAAGCGTGTCTTGTTTTCAATACACAAATTTCCTATTAGCAGATTCATG
TAAAAACGTCACGAAAAAATCAAAGAGTAAAGTTATGATTGGCTGAGACA
TGATTACCGCATGCTTTCGACACTTAAAAGAAAAAATATCTTATCTGTTC
AGAGCTTTACATGTTGTTTTTTTTAAATAAGAATATATTTGTAAGAATGT
CCATGATGAAAATGGCCAAAAAAATAAGAATATGCTAAGAATATCACTAT
CATGGAATTTTGCTACTCAAGCTAAGAATGCTATTTTTAGAGCGTTTTCA
ATTATAAATTGTCATCAATTACCCCCCAAGTAAGGCTCACTTCTTTTACA
AAAATGCCATTTTATGCTTGAGACTTATGTACTAAATGTTTAATCTAGTC
TGAATTAGGAACCTAACCTAGGAATGCTGTAAGAATATTTTAGGATGATT
TTCCCAAAAAAGTTAAGAATATCCATGATGAAACACCATTCTTATAAAAA
AAGCGTTTACTCGACGTTTTTTTGTGACTTTTCTCCCATGAATCTGCTAC
TGTAATAGGGAATTCGTGTATCCCGATCGCCAACAGCGCAACCAGTAGGT
TTTGAAACTCGAACTTTCCAGAATCTAAGTATGTAAAGTCTCATGTAAAA
GTGATTTCAGTTTTTCGATTGACTCTTTTGCAGGCCCTAACAAGGATCGC
ATTTATTTGAGACTATACATGAAAATCAAAAAAATTAAAAAAATCATTTT
GTAAAAAGCTGTATAATATTTGAAAAAGCTCACTTTGTTTTGTTTTTCTT
TTCCTGTGTATAGGGTAAGTCAATTAATGATTTTGTTGCGATACCTACAT
ACGTAAAGCTTTAGCAAGGGTTGCCACTAGCAATTCATTGGTTTATTTTG
TATCCAAACGCTAAAAGGACTCTACTCTTGAGCTAAGGATTGCCGCCAAA
ATGTCAGTAATACTTACACAAGTGTCATCCAATTTTGTTCTAAAACATCA
TCAAAATGACAGGGTGTTTAGAACTTTAAATTGTCGTATTTCCATACGTT
TTTGAGTATGAGACTTGTTGTAGTACTTTTTTTGCTCGGAATTTCATACA
CTATCCGATGGTTATCCACCGTTTTAGTTGAATACGAAAGAATTTTGTGT
GGTTGTGTTCTAGAAAAGATGTCACGGATACTACCGTCAACTGCTCTAAC
TTGGGACAATTGGTCGAAACATGGTACTGGTTGATATCTGGTCTGTATTT
TTCACTTACTGTTAAATCTCTTTGACAACAAATTTGTTTTGGTAACTCCA
CCAAGTTTATCAATCATACTTATTCGTTCCTCTTAGAATGCACAGACACT
CGTGTGTGTTCCACAACGGATTTTTTTCATATTTCGATTTAAAAGCCTAC
TCGGTGCGAAAGAAAAATCGTGTATTTTTTAATACGCCGTGCATTAACTC
AAATCAAATGACTTTGGAGGTTCGGTGAAATGCTGGCCGAATTGCCGTCC
CATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTGAGTGTTTT
CCCTCTAGTATAAATACACAACACTTAATTTATTTGATGAACTATTCTTT
TCAGTTGAGGTAGCCACACAAGGAGAAGACAGGATATTGAATACATTGAA
AAAGAGCGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAGTC
ATCTAAAAAACTGGAGGCAAGTAGTGGATAAAATTTTCGAAAATGACGAA
GATAATAGTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATACGGTT
TGGTGGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTTGC
CTGATCTTACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGGGCAGG
AATGATATTGTTAAAGATTTGAAACGTTTTAAAGAACAGCAAAAATTGTT
TGAAGTTTTGGATGCAGACGATATAAGTAAGTTGAATGTTAAAATGGATG
ATGATGAATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGAAAGTG
GCACACCACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAAAAAGA
TAATATTAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAGTT
TATTGGATATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAGAATTA
GCTAAAATTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCTTTGCT
TAAATTGCTTCATAAATAACATACTGTTTATGATTTTATGTGTTTATAGT
ACATTAGTATTTCTTACATGCACCCACACTGAGATAACAAAATTTGTATA
CCTCTGTTAGGGATAACGTAAAATAATTTTGAAATACACCAAACCGTATA
CACGCTTTTTTTTATAAAGAATATCCTCTCTAAGAATATCAGGGTGAAAA
TTGGCCAAATCGTAAGAATACCCTAAGAATATTATAGAGCGAGTTTCACA
GAATTTGATAAGAATACAATCATTTTGTATTTGGTTAACAGAAAAAAAAC
TGCTTCTCTTGTTAGACTTAAGATTTAAACTTTGATGTAGAAGTGTAATT
TTTGCTCCTAATGTGCACTCAAAAGTCCCAAACTGTCAAATTGATCGCAG
TGATGCAGAAAAAGTTTTAGTGAAATTGCTTTAGCGAATAACTATTTATG
ATTTTTAGTGCTGTCCTCATAACTCGGACGAATGTCTCCTTAACTCGAAC
AAGTCGTCTTATCCCTTAAAGTTTTTATTTTACATAAGTGTTCCCGTTTC
ATATCAGACACATATCATGACAGTGTCTGCCTATTGTTATATTATGCTGA
TATAAACAAGAAATGTTTTTCTCTTCCTCTTTCTGATCATCTTGTTCCAC
ATGTCATCCGTGCCAATCCAATGTGAAAACGCTTGTAAATTAAAACTGAT
GATTAAGCAAGTGATATCACTCTTATCTAAAAACAAAACCTTTAACATCC
CTTACCTGTCTTAATATTTGCGTCTCCCTCTTACGGGTCCGAGTTTTGAA
GACTTCACTGTGATACACATAAATATTTTTTACATGCACCACTTTATATT
TAGCTTTTACCAATTGTTATTTTATGAATTTTTATCATTTTG

Coding sequence (CDS) from alignment at sc0000231:383272..389213-

>TCONS_00016231 ID=TCONS_00016231|Name=TCONS_00016231|organism=Clytia hemisphaerica|type=CDS|length=3024bp|location=Sequence derived from alignment at sc0000231:383272..389213- (Clytia hemisphaerica)
TTGAGGTAGCCACACAAGGAGAAGACAGGATATTGAATACATTGAAAAAG
AGCGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAGTCATCT
AAAAAACTGGAGGCAAGTAGTGGATAAAATTTTCGAAAATGACGAAGATA
ATAGTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATACGGTTTGGT
GGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTTGCCTGA
TCTTACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGGGCAGGAATG
ATATTGTTAAAGATTTGAAACGTTTTAAAGAACAGCAAAAATTGTTTGAA
GTTTTGGATGCAGACGATATAAGTAAGTTGAATGTTAAAATGGATGATGA
TGAATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGAAAGTGGCAC
ACCACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAAAAAGATAAT
ATTAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAGTTTATT
GGATATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAGAATTAGCTA
AAATTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCTTTGCTTAAA
TTGCTTCATAAATAAGGTCAGAAAAAGAAGAATCAAGCCAAGAGAATGCA
AAAAATAGTAAAGCTGGAGTGGGTCAAATTCTAAGCACAGATGAGCTCAA
AACAGATTGAGGTAGCCACACAAGGAGAAGACAGGATATTGAATACATTG
AAAAAGAGCGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAG
TCATCTAAAAAACTGGAGGCAAGTAGTGGATAAAATTTTCGAAAATGACG
AAGATAATAGTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATACGG
TTTGGTGGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTT
GCCTGATCTTACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGGGCA
GGAATGATATTGTTAAAGATTTGAAACGTTTTAAAGAACAGCAAAAATTG
TTTGAAGTTTTGGATGCAGACGATATAAGTAAGTTGAATGTTAAAATGGA
TGATGATGAATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGAAAG
TGGCACACCACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAAAAA
GATAATATTAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAG
TTTATTGGATATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAGAAT
TAGCTAAAATTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCTTTG
CTTAAATTGCTTCATAAATAAGGTCAGAAAAAGAAGAATCAAGCCAAGAG
AATGCAAAAAATAGTAAAGCTGGAGTGGGTCAAATTCTAAGCACAGATGA
GCTCAAAACAGATTGAGGTAGCCACACAAGGAGAAGACAGGATATTGAAT
ACATTGAAAAAGAGCGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGA
AGGAAGTCATCTAAAAAACTGGAGGCAAGTAGTGGATAAAATTTTCGAAA
ATGACGAAGATAATAGTAAAGCAATTGAAATAAAAGCTACTATTGAAAAC
ATACGGTTTGGTGGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACA
GAAGTTGCCTGATCTTACGGTTGGTACTCTAAATGAAATATGTAAAGAGG
AGGGCAGGAATGATATTGTTAAAGATTTGAAACGTTTTAAAGAACAGCAA
AAATTGTTTGAAGTTTTGGATGCAGACGATATAAGTAAGTTGAATGTTAA
AATGGATGATGATGAATTTTGTTTGATTGTAGCGGAATCCGAAATATTGG
AGAAAGTGGCACACCACTTCGGCATCAAGGGTACTTTGTTCTCTCAACAT
GAAAAAGATAATATTAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCAC
CGTGAGTTTATTGGATATTTTGAATAGAGAAAGATCAGATATGACTGTAA
AAGAATTAGCTAAAATTTGTGAAGCGTTACGAATCAACGATGCAAAAGAT
GCTTTGCTTAAATTGCTTCATAAATAAGGTCAGAAAAAGAAGAATCAAGC
CAAGAGAATGCAAAAAATAGTAAAGCTGGAGTGGGTCAAATTCTAAGCAC
AGATGAGCTCAAAACAGATTGAGGTAGCCACACAAGGAGAAGACAGGATA
TTGAATACATTGAAAAAGAGCGAAAAGGAGAAATTGCAAGCTTGTTTGGA
TAAAGAAGGAAGTCATCTAAAAAACTGGAGGCAAGTAGTGGATAAAATTT
TCGAAAATGACGAAGATAATAGTAAAGCAATTGAAATAAAAGCTACTATT
GAAAACATACGGTTTGGTGGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCT
AGAACAGAAGTTGCCTGATCTTACGGTTGGTACTCTAAATGAAATATGTA
AAGAGGAGGGCAGGAATGATATTGTTAAAGATTTGAAACGTTTTAAAGAA
CAGCAAAAATTGTTTGAAGTTTTGGATGCAGACGATATAAGTAAGTTGAA
TGTTAAAATGGATGATGATGAATTTTGTTTGATTGTAGCGGAATCCGAAA
TATTGGAGAAAGTGGCACACCACTTCGGCATCAAGGGTACTTTGTTCTCT
CAACATGAAAAAGATAATATTAAAGCCATTGGTCCGGGAAAATTTCAAAG
CTGCACCGTGAGTTTATTGGATATTTTGAATAGAGAAAGATCAGATATGA
CTGTAAAAGAATTAGCTAAAATTTGTGAAGCGTTACGAATCAACGATGCA
AAAGATGCTTTGCTTAAATTGCTTCATAAATAAGGTCAGAAAAAGAAGAA
TCAAGCCAAGAGAATGCAAAAAATAGTAAAGCTGGAGTGGGTCAAATTCT
AAGCACAGATGAGCTCAAAACAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009064XLOC_009064Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016231-exon-sc0000231-1575043694:389116..389213TCONS_00016231-exon-sc0000231-1575043694:389116..389213Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1575043694:387915..387941TCONS_00016231-exon-sc0000231-1575043694:387915..387941Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1575043694:387260..387307TCONS_00016231-exon-sc0000231-1575043694:387260..387307Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1575043694:383272..384809TCONS_00016231-exon-sc0000231-1575043694:383272..384809Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1510915933:389116..389213TCONS_00016231-exon-sc0000231-1510915933:389116..389213Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1510915933:387915..387941TCONS_00016231-exon-sc0000231-1510915933:387915..387941Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1510915933:387260..387307TCONS_00016231-exon-sc0000231-1510915933:387260..387307Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1510915933:383272..384809TCONS_00016231-exon-sc0000231-1510915933:383272..384809Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1491911889:389116..389213TCONS_00016231-exon-sc0000231-1491911889:389116..389213Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1491911889:387915..387941TCONS_00016231-exon-sc0000231-1491911889:387915..387941Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1491911889:387260..387307TCONS_00016231-exon-sc0000231-1491911889:387260..387307Clytia hemisphaericaexon
TCONS_00016231-exon-sc0000231-1491911889:383272..384809TCONS_00016231-exon-sc0000231-1491911889:383272..384809Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016231-proteinTCONS_00016231-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000231supercontigsc0000231:383272..389213 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.29377	3.75856	2.97496	5.47643e-10	5.59212	4.7718	8.35219	8.52791	7.25216	8.0077	4.76739	3.08054	6.63146	2.99394	5.78149	4.70356	4.70003	1.87318	3.63628	3.30844	3.80948	4.096e-10	10.1932	9.72586	6.05375	8.09524	0	3.83684	5.83183	5.31026
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011029DEATH-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016231 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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