TCONS_00016097 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016097
Unique NameTCONS_00016097
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4673

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016097 ID=TCONS_00016097|Name=TCONS_00016097|organism=Clytia hemisphaerica|type=transcript|length=4673bp
tgaaaatttaagattttcttttttgaaattgaaaatcataGTATTTGATT
ACTGtattgatttgtttttgtttactgCTGCATGTGGAAAGATACGAGGT
GGATAGATACAATAATTATTATAATGAACTGTTGAAAATTGATCTAAGGA
TTGACGTTAAACATGTACACACTGCAAGGACTTGCATTACTGGTGATTCT
GATACCATGCATCGCATGCATTCAAATCGAAGATAATCGACAGCACAGTG
AAGGAGTGCAATCAATACCTTATTTAGATGACGTTGTCTCTTACCTTATG
GACCCTCACACGGAATTCGATGATGGTGATGAATCGGAATTCGATTCTGT
TGGACACAACGAGAAAGAAACATCCTCTAATGAGGAATCACCAGGAATGA
TGGATGGTGAAATGGAGAAGGCGAAAGAGGAGAAGAAAAGTAAAATCGAA
TCGGTTGATGAAGATGATAATCTGTTCACAGATACTGGAGATGACGATTT
GATGGACCTCGATGGCTCCAAGAAAGATGACATCAAACCAATCATCTCCA
AAGCCAAAGGAGACAAAGAGAAGATTGACGTCACAGTCAATGTTAACATC
AATGGAATTCCAAAAACCaagaaaaagaaatccaaaGTCGAAACATCAAC
TACGTCATCAAAGAAATCTGACACACCTACCAAAACATTAAACTCgacaa
aagaagaagaagaacctGCGGACAAAAGAAGTATCGTTCGCGCTAATAAG
GTATCGCCAACTATTACATCCAACAACAACAAGCTATCGAAGGTGACAGG
AGGTGTCCAAGCAGACAACGATAATGATGGtgatgatgataatgatgatg
aCGAGGATGACGAAAAAGATGTCGAGAAAACCAGTGAAAATAAACGACAT
GAGGGAACCGAAGCTAAGACTAAGGTGAGCAGTACATTAGCACATTTGAA
GGACGTTAAAGCACCACCAGCTTTGGTCAAtcaattgaagaagaaaatac
aagaagaagagaaagagaATGACTCAACATCGGAAGGagatgatgatgac
gatgatgatgaagatgatACGTCGGGATCGGGACATGTTGAAACTGCACC
GATGATGATGGCGACGGATAAGAAAAACGATGTCAAAGGAGAGAATGCTG
GATTGATTGGTTCAAAACTTACAACTGAGGAAAATACAGAAAAACTTGGA
AATAATGTCCACCCAGACTTTAAGAACAGCTCACTTTCAGCTGCCACGAA
TGCTCAAGAGCCAAGTGAAAACGGAGAAGCAGCTACATtgaaaaaatctg
aatcgaCCAAACAATTTGCTCCAAAGCCAACCAAAGACATGTCATTAGAA
GAAGTCGGTAAACACATCAAGAAATGgcaagaaaacaagaaaagcGAAGA
TGTGGATGTCGAATCTGATGAAGGCACCACAAGGagttggaaagaagaaa
aacaaaaacttgtCCGGAAATTGAAGAATCCGTTGATGGAGGGAGTTGAC
GAAGAAGGTGGAGATGTAGAAAACGAAGGAGCTGAAGAAGCCAGTGATAT
CACCAAAAGTGCTGACGATGCATTTACCAAAGTTGTTGATACGGTCACCA
CATCCGCACATGtacagaaattgaaaaaatcgcaagaaaaagatgtaaaa
gagGTAGCAGCAAGTGCTGAGAAAGCATTTTCAAACGTTGTGAACAACGT
GATGAGTGGAAAAGCCAACGAAATCTCTTTGAATCACCATGCATTGACAA
AGACTGCAAATGAACTCATCTCAAATGTCAAAGATGCATCTCATGGAGCC
AATATGAAGAAATTACTGaaattcaaaacacaaattCTCAGCGAGATCAA
GAAAATCAGTAAATTGCAGAAACAGTATGGTTTTAAAGCTAAAGGGGCTG
GTGATCTGACCGAAGCTAGATCAGTGTTGGAGAAAGATTTGAAGGTTGTC
AGCGAACTGGAAGGCAGATTGAAGAATCAACACAAGCAAGCTGAAGCTGC
CAACCATGACCAGAAAGCTTTTGGTCAATTCGCTAAGAGTGATTCTGAAA
CAATTCCTGATGAAACGTTAGGTTTTTCTTCTGAAGACGATACTAAGCAA
ACCAAAGCTGCTGGAAAATCGAAAGGAGGAAACaacaaattgaaagaaat
tcaaCAATTACTGAAAGCTGAAATTAAAcgattgaagaagaagaagactg
GAAAACCAGATCCACAATTGAATGATATCCGAAAAATGgttcaaaagaaa
ttgaaagggTTTTTGAAGAATGGAAACCTGGATAAAAATGCGTTTAAAAA
ATTAGCACCGGAGATCAAGGAGTTGGGTAACCTGCTGAAACATAGAATCA
AAAATGCGAAATCATACCACAAGAAAGTCATGAAAGCTACTAAGGCTGCT
ACTAATGGTTTCGCTCCAGCACCTGTTACACATAAAGgtttaaaagaagt
tttgaaCCAAGCTCAAACCCTACTTTCGGCTACCTCACCACACAATGATT
TACTCCAACAATCAATGACTCTGCAGGCTGCCAAGAATGCTTTGACCAGA
ATCAAATCCAGCAACGTATCACTTGTCGGAAGCCAAAGCAGTAAAATGAA
ATCTCTATTAACTTCCCTAAACTCAAAACTTGGTAAGGTTTTCCAGCATG
GTGGCTTCATGCAGAAGCCTCAACAACAACAAGGGCAAGGACAACAAAGT
TATGATCAACTTCACCAAATCCAAGGGATGAACCCAGCAGGTCAAGCCGT
TCAAGTACCATCCTCATTTGTCCAAGCATTCAAACCGAGACCTGGAGAAT
CTCTTTTGTTGCCCAAATCTCCTTACCAAGCTCAAGCTTTAGCCAAAGCC
GAAACACCAGAACCTGATTTCGATCCAGATCAAACAAAACCAATGGCTGG
AGCAGAGCCTGTCAACACATTGATCGATGCATTGGAAAGAGATATCACTG
AAGTATGGTCATACAAAGATCAATTCCAAAATGCAGAATCTCTTGGATTA
GACAACGAAAAGGTCCACAATGCATATGCCAACTTAGGATCATTATCCGG
GTTAAGTTTGAGAAGAGCTTTAGATCGAGCACTACGAGGCGAAGATGTCG
GTCTTGCAATTGTCGGTGGTTCCATCTCTAAAGGAGGTCCTTTCAGTGAA
AAAGGAATTGATTACATTTTGAAATCATATTTTTATGCTATTGAGGATTA
CTGGAATAAGATCATTCGTCCGGTCACTGGCTCCTCCTTGATTGTCCGGG
ATTGCTCCATTGGGGGTATCGCAACTGATTATTATTCATACTGCTTAAGA
AGTCATTTACCCGACGATAAATTAACCAATATTGTCCTTTGGGAATTATC
GGCAAATGATATGAAACGATTTGAAGAATCTGGGAAAAGTAGAACTCAAC
CTTTGGAACAGTTCGTTAGAAACGTCATCTCGTACCGTGCTAAACCATCC
TTAATATTCGTCAACTTTTTCGCAAACTTGGATTGGGACGCCGATATGGC
CGCTCATTGTCGTAACTTCGAAGACGAAGGAGGAGACGATATTGCTAAAT
ACTACAAAATCACAAGTCTCAGCTGGCGAAACATGGTTTGCCCTGAACTA
CAATCTGGATCACCTCTCTTCACAAGAGATAGGCTATTCTCAGAAGATAA
ATTCCATCCGTCAATCCAAGGGCATGCACAAGTCGCATATCTTCTCATTG
ATTACATCCGAACAGAGTTCCTGAAGAATCTGGTCAAAATGAGAACGACG
AATATTGAAGATGCCGTCACACGTCTACAAATCCCACATTCTGTCTATGT
GCCACGCCCGTTATTCCGTGATACAGTTACATGGAAACCTCTCTGTTACA
CTTACATGCTGACTGATGATAAAATGCCCAACAATACTCTACAGCTTGAT
ACATCCGCAAGTGGTTCATTCAAAAGTGTAGTTGTCCGCGCGTTCAAAGT
GCGTTCAGATAAGATAGCAGGTATGAATACGCAAGATAACGATCAACACG
TCAGCTATACTATCCACCTACCCCCACATCCTGGAGGTGGAATCCAACCC
TACAGAAGACTTGGAATCATGTCTTTCACCGATAACAGAAGTGCAAATAT
TCAATTTGATGCAGAACCAACTCAGACCATAGAAACAGGGAAAAGATTCT
TGGAAGGAACCACCATCAAATATATAGCAAAAGACATTCGACCCGGTGAT
CACCAGCTCTCTGTTAGATCTGGAAATAATGGATTCTTAGTATGTGCTAT
TCTTGTTGGGTAGAATGGAAACGAGCTTAAGACTCTTGATAGAGGAAAGA
GGCTAGCAAGACCCCCTGACAGACAATGGTTTACGCAAGAAAAACAATTA
GAGAAAGAAGAGTAGGAAAACTATCATTTCCAATCCCAAGAATCCGTTTA
GGCTTCTTTGGTGTTACATCAGGGACGCCTTGTAGTTGAATATTCTACTG
TAGCATTGCAATTAAAAGTGCGAAGAGAACACTTGTATATTGGAGCTTCG
GGACCtttaaaacaaataattttagAGTTCTATGTATACCAATACTTTGC
TaacaaatagaaattttatcaatttataGATTGTAAATAGTGATATATAG
ATCATACATTTATTATTCGTAAGAATTCCAGAAAAAACGAAGAaagctta
tttttattcatcatTTGTTGATG
Run BLAST on NCBI

transcript from alignment at sc0000226:254239..266911+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016097 ID=TCONS_00016097|Name=TCONS_00016097|organism=Clytia hemisphaerica|type=transcript|length=12673bp|location=Sequence derived from alignment at sc0000226:254239..266911+ (Clytia hemisphaerica)
tgaaaatttaagattttcttttttgaaattgaaaatcataGTATTTGATT
ACTGtattgatttgtttttgtttactgCTGCATGTGGAAAGATACGAGGT
GGATAGATACAATAATTATTATAATGAACTGTTGAAAATTGATCTAAGGT
AAACTCAAAGTTGAAATTCAGTAAAGTCTGGAATTCTAGAGGGGATATTG
TTTTGACAATGGGTCACTAAACGTAGACAAAAATTCATACTGGAGAGTAA
AACTTCATGAATTATCTTATGAGTGGATAATAatagtgtcataaaaatct
actcTCCCACACAAATTTTGGACCCTTCTTGTCTAGGTTAATGCTAAAGG
TTGTcttcttacatccctgtctcaaacCTCCAGTTTTTTCCTTAgtgagg
ataaaaattctattgtttaaaaatccATTGGACTGATTTTGGAGTGCaac
ttttaaacattgaatttcgagtggaaACCCGTTCAAAACCCGTTCAACCC
GTTGGGgttgaaattccagggtattttcccatcgGGGACAAAGATTTTGC
CAAGTTTTCCATTTGatctggggtcccagcgggtctgtgacacaggggtg
ccTTCTTTAAAGGTATTACACAGtgtttttccttgaaaaagcccATTATC
TCAACTTGTTTCATGATTTCATTAAACAGGATTGACGTTAAACATGTACA
CACTGCAAGGACTTGCATTACTGGTGATTCTGATACCATGCATCGCATGC
ATTCAAATCGAAGATAATCGACAGCACAGTGAAGGAGTGCAATCAATACC
TTATTTAGATGACGTTGTCTCTTACCTTATGGACCCTCACACGGAATTCG
ATGATGGTGATGAATCGGAATTCGATTCTGTTGGACACAACGAGAAAGAA
ACATCCTCTAATGAGGAATCACCAGGAATGATGGATGGTGAAATGGAGAA
GGCGAAAGAGGAGAAGAAAAGTAAAATCGAATCGGTTGATGAAGATGATA
ATCTGTTCACAGGTAAGCAAAATGTTCAGAAATTGAAATATCAGACTACT
TCATcgtgtgaaattcatcaaaacttTCGTGAAAAGCATAAAAGTCAATG
CGGATACCaccttattttcaaaaattttgccaggATACTTCAACGTTAAG
CCACATGGTTTTATTTCTGTGTCCTTATGCTTTCACATCAAATTGATAAT
GCGGTGTTATTGAGGGGATACATATTGAAGAGTAAATATTGTTTGAAAct
atcattttattttgaataaatatccGCATTAATTTTGATATATCTCGATA
GATTGAAATTCTACACTAACCCGATATCCCATTCGGATGGGAGAATTCCT
CCTTTTAACAAAACCTATCAAGACTGATAATCTCAACTTTTGCAGTGAAC
AGAGAGACGGAGAAATTTCATCATCGTgacaaaatctacaaaaactttta
gattttaacCACTTACAAAAACAATATATGTAACTAACATATTTTCATCT
CCAGGAATGAAACTGGCCAACATCAACCGTGACTTATTGACAGTACGTGA
CAAAATTACACGACATCTTGACGACACTGCTAATAAATTAACGACAAATA
ACGACAATACCGATCCGTACGACTCCAAAGTATCCGACAAAGACCAGAAT
CTTCAAGTGACGAAAAATTTGATCGGTTTATTATATGACTTCAAAGGGAA
GAAACACAAAAGACCACGTAATTTAAATTATTCTTCATGCAATAAAAAAA
TCCGAGCTTTGTCTTGTTTTCCGGACTACATTATTAATCTAATTCTTAGA
CTATGctatatagtctaagacaaatcacttcactatctaagaaataggcc
caaagccgaagaaaattcgcaaacgggcattttgccgaaaagagtttttT
CCGTaaaccgccataacgccatgccgccatattttcccgcctttgctatc
actgtaacggaagATAACATCGTCTATCTAATTCTTAGAAATAAGAACAG
TTACAAGCTGAACAGTAAGATAATAATTCGTTAAAACGTGAAAAAGGGCT
GACGTGTTTGTGGTATAGGGGGATTTGAAACCAATAGAACAAAACGAATG
AAAGGTCATCTGTTTGAACCATCCATGTTATCATTTGAGAATTACtgaga
aaaaaaacagcaaaGGTTATTGTGACTGACAATGAAAGGTAAATCGAACG
AGGTTGCAAATCCTGGTGCAgatatttcaatgttttcatttcattttctc
tttcagATACTGGAGATGACGATTTGATGGACCTCGATGGCTCCAAGAAA
GATGACATCAAACCAATCATCTCCAAAGCCAAAGGTAAGGATATTTGGAT
ATTTTGATAATGTGTTAGAATTGAAGATGTATAAGATGTGGTTCACAGAG
AATATGTATACTGATTTtgcagcccgggggggggggggacNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAtaaggggtatgtgcggacgggacctccgaa
aaccgacccttagagagactgatttttgctgaaaaggtgacccttagaga
gactttttgaatttctttttacgatttttgaaaaaagtcatacccttaga
gagagttTATTACAATtctttctctggaaatcaaaaaatttcctaaaaat
cctgaattttccgacccttagagagactaatttaaaactttctgattttt
ccgacccttagagaaactttgaaaggtgaaaaaaccgacccttaccgtcc
gcacatacccatcatacATTTTTACCTaagttcccccccccccggatttt
GCAGTTATATAAAAATAAGCATGCTTAAAGGGTTAACAGTTGACACAGTT
GATAGAGCAATTAATGTTTGTCAACTAAGTTAAAACAAAGCTCTGGCGAT
GCATAAAGATCTTTAATTAAATAGTACAACCATCCTATCTAAACATGGTT
TCATGGTGAAACTCAACTCATAGATTTTTATCCAAATATCTTCACTCAAG
AACCTTTCTTAAAGAGaggttttgttggtttttgttgttttttctagttt
gatgaaatttcttcctttaaagaaTATAGTTATGCAAAGCAAAATATGCA
TTTAATCTTTGTTCCGATGAATGATCAATCTGATTTGTTTTTCAGGAGAC
AAAGAGAAGATTGACGTCACAGTCAATGTTAACATCAATGGAATTCCAAA
AACCaagaaaaagaaatccaaaGTCGAAACATCAACTACGTCATCAAAGA
AATCTGACACACCTACCAAAACATTAAACTCgacaaaagaagaagaagaa
cctGCGGACAAAAGAAGTATCGTTCGCGCTAATAAGGTATTGTGCTCGCT
TTGCTGCAAAATCGTATTTGtcaactacagttgacgctctctaattctaC
GTTCTCCTATTCGatacactcccttattcgatgaaaatccaattcccctt
gaagatcaaattatagagcgtcaactgtagctATTTtgtcaaccttgaaa
acctAAAATGCTTAAAACTAGGGCATCCTAAATCTATATCACAATCTATG
GTTAcacattttcataatttaccCCTTTTAGCCTCAACTAGAAAGAAACT
TCAGTGACTGCCAGTAGCTGTCTGCCTATATCTTCAATGTCATGATTTGG
TAAAAAGCGAATGAAGACAGACGATCTGGCTACTTGTGTCTTCTTTGAAG
ACGGGGTCAATTACGCCAGCCTGCTCATATTTTTCCCAACCAAAACTCTT
CATTGAATCATATATACAAGTTTGTACACGTAGTAAATATCTTCACTCAT
GGAAAACGTCTTTTTCTCCTCTCATAGGTATCGCCAACTATTACATCCAA
CAACAACAAGCTATCGAAGGTGACAGGAGGTGTCCAAGCAGACAACGATA
ATGATGGtgatgatgataatgatgatgaCGAGGATGACGAAAAAGATGTC
GAGAAAACCAGTGAAAATAAACGACATGAGGGAACCGAAGCTAAGACTAA
GGTATATAAGATTGATCATAAAAATTTTTATCTAGAGCTAAATATGGTAG
GCCACTAATGGAACTGGACTATATGGCCGGGAAAAAACATTGCCAGTTAA
TTTGTACCATTTGcgttcgttttttttttgactggaaTGTGAAATCCCCT
TATAATGTTACCGTATGACTGTGAGAATtacaagtgaatgtacctttgCT
AGGACCAACTCATTCAAAGCCAAAAGTGAAAGCGAAAACCTTCGAATCAC
TTTTTCATATACTTTAAAGGGTTTTTACCAGCTGAACTACTCAAATTCGA
TCAAACAGTAATTTCTTCTACATAGGTGAGCAGTACATTAGCACATTTGA
AGGACGTTAAAGCACCACCAGCTTTGGTCAAtcaattgaagaagaaaata
caagaagaagagaaagagaATGACTCAACATCGGAAGGagatgatgatga
cgatgatgatgaagatgatACGTCGGGATCGGGACATGTTGAAACTGCAC
CGATGATGATGGCGACGGATAAGAAAAACGATGTCAAAGGTTACAAACAT
TTTAACAAATAACATCTCTGTATCAGTGGCTCCTATGAGGATTTTTTAGT
TAGTTAGGATTTAATAAAGAAGTTTTATGTTAACGGTAAAGGAATAAGGT
TGCCACCTCTCTTGTCAAAGACCAAggtttttttggtaaaaattgcGTTC
TTGGTTGGAATGTGAAGTCAGTGTAGTTCTGGAGAAGaatttttaaggta
tttttctctCAAACTCTCAATTATTTGGCCGCTTTATCCAGTGGGGAGAT
GCAATGAAGTAAACGGAAGACTGGAAACGAATCttcaatttcttattttt
ccctCTTTAGGAGAGAATGCTGGATTGATTGGTTCAAAACTTACAACTGA
GGAAAATACAGAAAAACTTGGAAATAATGTCCACCCAGACTTTAAGAACA
GCTCACTTTCAGCTGGTAAGGGAATCGTAATAATACgtaaatactatttt
tttcctTATTAACAACCAAACCAGCCCTGAGACAAGCCAATAACtatctt
tgaaaatgaaaagccTGTTAGATATGCAGAAAAGGACAGCCTCTGACCCA
ATAAGGTTAAATGCTAACTCCAGCCCTAAGTCAAAAATCGGCGAACTGCT
TATAAAAACGTGCAGATTAAAacgaaaatcataaaatcaaagTAGCATAG
CTTAGATGATATCGATCCAATATGAAGTTAAATCTATACTCAAAATATTG
ACAATTTCCTTCATTCAGCCACGAATGCTCAAGAGCCAAGTGAAAACGGA
GAAGCAGCTACATtgaaaaaatctgaatcgaCCAAACAATTTGCTCCAAA
GCCAACCAAAGACATGTCATTAGAAGAAGTCGGTAAACACATCAAGAAAT
GgcaagaaaacaagaaaagcGAAGATGTGGATGTCGAATCTGATGAAGGC
ACCACAAGGagttggaaagaagaaaaacaaaaacttgtCCGGAAATTGAA
GAATCCGTTGATGGAGGGAGTTGACGAAGAAGGTGGAGATGTAGAAAACG
AAGGAGCTGAAGAAGCCAGTGATATCACCAAAAGTGCTGACGATGCATTT
ACCAAAGTTGTTGATACGGTCACCACATCCGCACATGtacagaaattgaa
aaaatcgcaagaaaaagatgtaaaagaggtatagaaaatattttttctta
attATTTCCGGACAGAAGAAGTTTTCGTGCGTTTTTTGATGAAACTTCAG
CATGCGAGACTCCATGCGATATATAGTTTGGCCCCTATATGGTCCACAAC
CAACGAGTAGAAGAAGGATTAaagcaacgatgtaaaaataatagataacc
aactacctctagaaggcacttctcccaagagaacaaccattgttttccta
ttgaaatgagcactcctttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtcatctggataaataaacgctcataaaatg
ctgttatctgaaaaatatatgtgtgatttgaagtgcgatacctcacgaat
gaaaagtgcatgaaggttgcctgatacaaaataaacagatgaatgtgtat
agaacaataatatctaattaaaaaattccttctgtgaggctgcctatagg
aaaatacactttttctaacccaaattttggaaaaatatacatcacgtgat
cgattctgtccaatagaaggttgcaaatgaaggaagtttttatttaattg
cactttttacgatgcaaaatgtcattaatatttttacaaccgtaacacgg
atgtttttcgagaatcaaggcaagttggttatctattatttttacatcgt
tgattaAAGGATAGGATCGGAACCTATGGATATATTATCGACCGCCCTGA
AGGCGGTCCCACCAGTTTTGTATACGgtgaaaaatctcatttgctcgaAA
TCGGTAGGCCAATTGTCGCATATGAGTGCAATACTGAGGAGATAATAACA
ATTTCGATTACCTCCGTAATATATTAACCGCGTgaccaaatttaataaaa
cgcgggaaagaaCTTTTGCAAGTCACTCAATNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CAATAGTTTTTAACGTGtaatactctcgggtatctaattacttttgattg
aaaacaatttacctttcggtaattagttattataaagtaaacaaaggatg
gtgaaaaatatgagcatttttatttttattataagcatctactttataag
aatcaaatcaaaaactcttgCTTAAAGGCaatttacctttcggtaattag
tttttacaaagtaaacaaaggatggcgaaaaatatgagcatatttatttt
tcttataagcatctactttataagaatcaaatcaataactcttgattaaa
ggcaatttacctttcggtaattagtttttacaaagtaaacaaaggatggc
gaaaaatatgagcatatttatttttcttataagcatctactttataagaa
tcaaatcaataactcttgattaaaggcaatttacctttcggtaattagtt
attatgAAGTAAACAAAGAACTATTGAGTAATTAATTGACTGCTTAAGTT
AACAAAATGTGAGATTCTTCCGGTTTGATCAATTGGTATTTTAAGCAACT
TTACTTAGTTtgcaaatttttaatctcaaaaatcaaacagaCGGGTGGAA
AGataattataaaaatcaaaatgagtTTAATCAAATTTTCAGGGCGGTCG
CACCAGTGGGTGAAATGACTTTTCAGCCACTGTACTAGTATATTCTAAGA
AAAGGGAACGTAAAAGTCAATGTATATTTGTGTCAAAAATTAAAAGTGAA
CATTAAAAACACAGTAGTGTGTGCGACGTTTCGACGGTTGTCTTTATCAA
GTATTCTAAGAAAAGGGCATGTACTATAGTATGATGAAAGTTGAGTTTAT
AAACTTTGTTGGAAGAAAAACTGCCTATGTTATTAAGATTGCATTGTCAT
TTGTATCTTATAGGTAGCAGCAAGTGCTGAGAAAGCATTTTCAAACGTTG
TGAACAACGTGATGAGTGGAAAAGCCAACGAAATCTCTTTGAATCACCAT
GCATTGACAAAGACTGCAAATGAACTCATCTCAAATGTCAAAGATGCATC
TCATGGAGCCAATATGAAGAAATTACTGaaattcaaaacacaaattCTCA
GCGAGATCAAGAAAATCAGTAAATTGCAGAAACAGTATGGTTTTAAAGCT
AAAGGGGCTGGTGATCTGACCGAAGCTAGATCAGTGTTGGAGAAAGATTT
GAAGGTTGTCAGCGAACTGGAAGGCAGATTGAAGAATCAACACAAGCAAG
CTGAAGCTGCCAACCATGACCAGAAAGCTTTTGGTCAATTCGCTAAGAGT
GATTCTGAAACAATTCCTGATGAAACGTTAGGTTTTTCTTCTGAAGACGA
TACTAAGCAAACCAAAGCTGCTGGAAAATCGAAAGGAGGAAACaacaaat
tgaaagaaattcaaCAATTACTGAAAGCTGAAATTAAAcgattgaagaag
aagaagactgGAAAACCAGATCCACAATTGAATGATATCCGAAAAATGgt
tcaaaagaaattgaaagggTTTTTGAAGAATGGAAACCTGGATAAAAATG
CGTTTAAAAAATTAGCACCGGAGATCAAGGAGTTGGGTAACCTGCTGAAA
CATAGAATCAAAAATGCGAAATCATACCACAAGAAAGTCATGAAAGCTAC
TAAGGCTGCTACTAATGGTTTCGCTCCAGCACCTGTTACACATAAAGgtt
taaaagaagttttgaaCCAAGCTCAAACCCTACTTTCGGCTACCTCACCA
CACAATGATTTACTCCAACAATCAATGACTCTGCAGGCTGCCAAGAATGC
TTTGACCAGAATCAAATCCAGCAACGTATCACTTGTCGGAAGCCAAAGCA
GTAAAATGAAATCTCTATTAACTTCCCTAAACTCAAAACTTGGTAAGGTT
TTCCAGCATGGTGGCTTCATGCAGAAGCCTCAACAACAACAAGGGCAAGG
ACAACAAAGTTATGATCAACTTCACCAAATCCAAGGGATGAACCCAGCAG
GTCAAGCCGTTCAAGTACCATCCTCATTTGTCCAAGCATTCAAACCGAGA
CCTGGAGAATCTCTTTTGTTGCCCAAATCTCCTTACCAAGCTCAAGCTTT
AGGTAAGAGAATCATACATTCAATTCTTGATTAATAAATAAGTGATGTTT
GAAATATCCCTGTTTTGATCCGACAATTGATTACCAACTACTGTGTAGAT
CGCGGTAGCAAATCCACGGCAAATCCATGATGTAATTcttttaaggtttt
tcaccaACCaaaattattatccatatagcggtcattaagtaagccattaa
agattcgaacggcgggcggtattgaaaggttctatgactcaaatagtcat
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNatgactcaaatagtcatacccgcgct
gagaaaactaaggcgtcgtgcttcagagggctgaaatatcattaaccgcc
ctggttatagggcaataacgtcatttgtggcccgctcggaactttattga
agtcgttgcattgaagcggtgagactaaaccgacgtcagaaaaaaaacac
tttttggtcatttgcggcccgctcggaactttattgaagtcgttgcattg
aagcggtgagactaaaccgacgtcagaaaaaaaacactttttggtcattt
gcggcccgctcgcaagggtacttaaaacttgttgaagtcattgcattgaa
gcgaaaagacttggcTGATGCTAGAAAAAAACATTGTTTGAATTTCCGAT
Atagataataatagtaatagcgttaagctatcgttcgttgttgtcattaa
ctctgcccttgcagtttgattattagccctctagtgccatttgcgccctc
cgcttcgcgtcgggcccaaatgacactctcGGGCTATTAATCAAACTgtg
cgggcagaaaataacaacaacgacctcaaactgaacgctattgttatatt
atacaAATATGATAGTATGTCAAAGTGAAAGTTTATAGTGCAGTATTATC
TTTTGCGTTCGATGGTCGAGTTGCAAAAATGGTCTggaaattgatgtttt
ttctcTGAGATTTGAATGCATTTAATGTTTtctcaacgttcatctaacgt
tttatGCACCTTATTGGACATTTGATGACCGTTACAAGATCATAACAAGA
ATTGAAATACTAACAAATCTTTTTATCATTTCTTTCCAGCCAAAGCCGAA
ACACCAGAACCTGATTTCGATCCAGATCAAACAAAACCAATGGCTGGAGC
AGAGCCTGTCAACACATTGATCGATGCATTGGAAAGAGATATCACTGAAG
TATGGTCATACAAAGATCAATTCCAAAATGCAGAATCTCTTGGATTAGAC
AACGAAAAGGTTTTTAAGTTTAAATTGTTAATTTAGAAATTAAGGCtgta
ttttaacaaaaatttttagaCCTATGTGCAATTTCAAGCAAGCTATAAGG
CCCCTGAGGGGGGCACTTGTTTTAAAATTAACACAATGCACTTTGTGAAG
CTTGAAAACGCAGCCTTAAGGACCGCACACACGACCAGTCTTTTACCTAG
AGTGCCACACCTGAGGATGAGGATGTGTCAAATTTGTCACAGTTCAAGAA
TGTGAAATCAGGATTAAGTCAGTTTCACTTTTACACCATTAGCTTCAAAG
CATGAATGGAAAAGAAATATTCCATTAGTTTATACTTCAGCGGCAAAAGA
AGACATACTTTTCTTCTTAAGCACATGCATACTCCTTCCCTGCACAGGAA
ATATATACTTGAGCGCCGAGAacaattatataaaaaatgatTCTCCATTT
TCTTACAGGTCCACAATGCATATGCCAACTTAGGATCATTATCCGGGTTA
AGTTTGAGAAGAGCTTTAGATCGAGCACTACGAGGCGAAGATGTCGGTCT
TGCAATTGTCGGTGGTTCCATCTCTAAAGGAGGTCCTTTCAGTGAAAAAG
GAATTGATTACATTTTGAAATNGATCTCAAAAGGAGGTCCTTTCAGTGAA
AAAGGAATTGATTACATTTTGAAATCATATTTTTATGCTATTGAGGATTA
CTGGAATAAGATCATTCGTCCGGTCACTGGCTCCTCCTTGATTGTCCGGG
ATTGCTCCATTGGGGGTATCGCAACTGATTATTATTCATACTGCTTAAGA
AGTCATTTACCCGACGATAAATTAACCAATATTGTCCTTTGGGAATTATC
GGCAAATGATATGAAACGATTTGAAGAATCTGGGAAAAGTAGAACTCAAC
CTTTGGAACAGTTCGTTAGAAACGTCATCTCGTACCGTGCTAAACCATCC
TTAATATTCGTCAACTTTTTCGCAAACTTGGATTGGGACGCCGATATGGC
CGCTCATTGTCGTAACTTCGAAGACGAAGGAGGAGACGATATTGCTAAAT
ACTACAAAATCACAAGTCTCAGCTGGCGAAACATGGTTTGCCCTGAACTA
CAATCTGGATCACCTCTCTTCACAAGAGATAGGCTATTCTCAGAAGATAA
ATTCCATCCGTCAATCCAAGGGCATGCACAAGTCGCATATCTTCTCATTG
ATTACATCCGAACAGAGTTCCTGAAGAATCTGGTCAAAATGAGAACGACG
AATATTGAAGATGCCGTCACACGTCTACAAATCCCACATTCTGTCTATGT
GCCACGCCCGTTATTCCGTGATACAGTTACATGGAAACCTCTCTGTTACA
CTTACATGCTGACTGATGATAAAATGCCCAACAATACTCTACAGCTTGAT
ACATCCGCAAGTGGTTCATTCAAAAGTGTAGTTGTCCGCGCGTTCAAAGT
GCGTTCAGATAAGATAGCAGGTATGAATACGCAAGATAACGATCAACACG
TCAGCTATACTATCCACCTACCCCCACATCCTGGAGGTGGAATCCAACCC
TACAGAAGACTTGGAATCATGTCTTTCACCGATAACAGAAGTGCAAATAT
TCAATTTGATGCAGAACCAACTCAGACCATAGAAACAGGGAAAAGATTCT
TGGAAGGAACCACCATCAAATATATAGCAAAAGACATTCGACCCGGTGAT
CACCAGCTCTCTGTTAGATCTGGAAATAATGGATTCTTAGTATGTGCTAT
TCTTGTTGGGTAGAATGGAAACGAGCTTAAGACTCTTGATAGAGGAAAGA
GGCTAGCAAGACCCCCTGACAGACAATGGTTTACGCAAGAAAAACAATTA
GAGAAAGAAGAGTAGGAAAACTATCATTTCCAATCCCAAGAATCCGTTTA
GGCTTCTTTGGTGTTACATCAGGGACGCCTTGTAGTTGAATATTCTACTG
TAGCATTGCAATTAAAAGTGCGAAGAGAACACTTGTATATTGGAGCTTCG
GGACCtttaaaacaaataattttagAGTTCTATGTATACCAATACTTTGC
TaacaaatagaaattttatcaatttataGATTGTAAATAGTGATATATAG
ATCATACATTTATTATTCGTAAGAATTCCAGAAAAAACGAAGAaagctta
tttttattcatcatTTGTTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009002XLOC_009002Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016097-exon-sc0000226-1491911889:254239..254386TCONS_00016097-exon-sc0000226-1491911889:254239..254386Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:254239..254386TCONS_00016097-exon-sc0000226-1510915933:254239..254386Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:254239..254386TCONS_00016097-exon-sc0000226-1575043694:254239..254386Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:254918..255250TCONS_00016097-exon-sc0000226-1491911889:254918..255250Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:254918..255250TCONS_00016097-exon-sc0000226-1510915933:254918..255250Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:254918..255250TCONS_00016097-exon-sc0000226-1575043694:254918..255250Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:256495..256572TCONS_00016097-exon-sc0000226-1491911889:256495..256572Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:256495..256572TCONS_00016097-exon-sc0000226-1510915933:256495..256572Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:256495..256572TCONS_00016097-exon-sc0000226-1575043694:256495..256572Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:257534..257724TCONS_00016097-exon-sc0000226-1491911889:257534..257724Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:257534..257724TCONS_00016097-exon-sc0000226-1510915933:257534..257724Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:257534..257724TCONS_00016097-exon-sc0000226-1575043694:257534..257724Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:258216..258389TCONS_00016097-exon-sc0000226-1491911889:258216..258389Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:258216..258389TCONS_00016097-exon-sc0000226-1510915933:258216..258389Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:258216..258389TCONS_00016097-exon-sc0000226-1575043694:258216..258389Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:258714..258927TCONS_00016097-exon-sc0000226-1491911889:258714..258927Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:258714..258927TCONS_00016097-exon-sc0000226-1510915933:258714..258927Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:258714..258927TCONS_00016097-exon-sc0000226-1575043694:258714..258927Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:259249..259353TCONS_00016097-exon-sc0000226-1491911889:259249..259353Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:259249..259353TCONS_00016097-exon-sc0000226-1510915933:259249..259353Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:259249..259353TCONS_00016097-exon-sc0000226-1575043694:259249..259353Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:259657..260066TCONS_00016097-exon-sc0000226-1491911889:259657..260066Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:259657..260066TCONS_00016097-exon-sc0000226-1510915933:259657..260066Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:259657..260066TCONS_00016097-exon-sc0000226-1575043694:259657..260066Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:262252..263440TCONS_00016097-exon-sc0000226-1491911889:262252..263440Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:262252..263440TCONS_00016097-exon-sc0000226-1510915933:262252..263440Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:262252..263440TCONS_00016097-exon-sc0000226-1575043694:262252..263440Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:264578..264747TCONS_00016097-exon-sc0000226-1491911889:264578..264747Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:264578..264747TCONS_00016097-exon-sc0000226-1510915933:264578..264747Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:264578..264747TCONS_00016097-exon-sc0000226-1575043694:264578..264747Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:265197..265349TCONS_00016097-exon-sc0000226-1491911889:265197..265349Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:265197..265349TCONS_00016097-exon-sc0000226-1510915933:265197..265349Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:265197..265349TCONS_00016097-exon-sc0000226-1575043694:265197..265349Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1491911889:265404..266911TCONS_00016097-exon-sc0000226-1491911889:265404..266911Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1510915933:265404..266911TCONS_00016097-exon-sc0000226-1510915933:265404..266911Clytia hemisphaericaexon
TCONS_00016097-exon-sc0000226-1575043694:265404..266911TCONS_00016097-exon-sc0000226-1575043694:265404..266911Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:254239..266911 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0404586	0.039251	6.38034e-09	0	0.775182	1.04077	10.5049	10.7752	1.63704	1.74983	8.53863	6.06806	9.68353	7.78732	5.94979	18.4971	9.99644	9.74505	0.115128	0.331711	5.76867	5.85018	3.96055	3.0155	4.96442	5.766	0.568297	0.267741	0.119644	0.193797
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016097 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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