TCONS_00016083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016083
Unique NameTCONS_00016083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length123

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016083 ID=TCONS_00016083|Name=TCONS_00016083|organism=Clytia hemisphaerica|type=transcript|length=123bp
cttaCCCAAAAGGTATTGCTTAACTGCTAAGACAAGGATAAAATCCTTGC
AGATAGACTTTGAATAACGTATGACGTGATGGGTTGTTAGTTTAGGTTAA
AGTGGAGTTGTAACTTCTTACAT
Run BLAST on NCBI

transcript from alignment at sc0000225:372577..372699

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016083 ID=TCONS_00016083|Name=TCONS_00016083|organism=Clytia hemisphaerica|type=transcript|length=123bp|location=Sequence derived from alignment at sc0000225:372577..372699 (Clytia hemisphaerica)
ATGTAAGAAGTTACAACTCCACTTTAACCTAAACTAACAACCCATCACGT
CATACGTTATTCAAAGTCTATCTGCAAGGATTTTATCCTTGTCTTAGCAG
TTAAGCAATACCTTTTGGGtaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008993XLOC_008993Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016083-exon-sc0000225-1491911889:372577..372699TCONS_00016083-exon-sc0000225-1491911889:372577..372699Clytia hemisphaericaexon
TCONS_00016083-exon-sc0000225-1510915933:372577..372699TCONS_00016083-exon-sc0000225-1510915933:372577..372699Clytia hemisphaericaexon
TCONS_00016083-exon-sc0000225-1575043694:372577..372699TCONS_00016083-exon-sc0000225-1575043694:372577..372699Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000225supercontigsc0000225:372577..372699 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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