TCONS_00016015 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016015
Unique NameTCONS_00016015
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length117

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016015 ID=TCONS_00016015|Name=TCONS_00016015|organism=Clytia hemisphaerica|type=transcript|length=117bp
GTCAAATGAATATGTCgagtttgttttaaattttgtttggtCAATCATAC
CATCCTCTTTGATCGAATTCATCATGGGAATCCTTATAAATTGGTAAGTC
ATTGACCTACTTGACTT
Run BLAST on NCBI

transcript from alignment at sc0000224:1920..2036

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016015 ID=TCONS_00016015|Name=TCONS_00016015|organism=Clytia hemisphaerica|type=transcript|length=117bp|location=Sequence derived from alignment at sc0000224:1920..2036 (Clytia hemisphaerica)
AAGTCAAGTAGGTCAATGACTTACCAATTTATAAGGATTCCCATGATGAA
TTCGATCAAAGAGGATGGTATGATTGaccaaacaaaatttaaaacaaact
cGACATATTCATTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008942XLOC_008942Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016015-exon-sc0000224-1491911889:1920..2036TCONS_00016015-exon-sc0000224-1491911889:1920..2036Clytia hemisphaericaexon
TCONS_00016015-exon-sc0000224-1510915933:1920..2036TCONS_00016015-exon-sc0000224-1510915933:1920..2036Clytia hemisphaericaexon
TCONS_00016015-exon-sc0000224-1575043694:1920..2036TCONS_00016015-exon-sc0000224-1575043694:1920..2036Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000224supercontigsc0000224:1920..2036 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016015 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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