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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015979 ID=TCONS_00015979|Name=TCONS_00015979|organism=Clytia hemisphaerica|type=transcript|length=998bp
gaaaatttgcatgtcggatatatacgacatcggcaagtagagtgaaaatt
tgcatgtcggatatatacgacatcggcacggaaagggCTAGACAGAAACA
GTtgcagaaaacttttgaaattttttcattgtagTTACCGTAGTAACTTG
ACAGTGACAAAAATCGTTTTGTTGAGATTTCTCTGAGGTGGGTGGGCCAT
TTGAAACAAagttcctattagcagattcgtAACAAAGTTACGAATAAACG
TCGAGTTAAAGCTCTgatctttttgcattttttcagCATGTTAGGGTTTA
ATTCGGTCTGATATTGCTATTTTGCAGATGATGTGACTTTATTTCTTATA
TTATTTAAACATTTCTTACTTTAGTTTAATATTACATTTACTGGTGATTT
CAAAGACTTGAAAAGgggaatttttttggaaaaaaagtatcaagtggatc
tctgaatcaGTACATGTTTCTTAATCCTCTTTTTATGACAGAATTTTATT
TGAGAAGTGACGTGCCAATAccatattattttcatcaaaattataataca
cccctgtgtcacagacccgctgaaACCCAAGactcactggaaaatttggc
ctaaatttcatccccggtggaaaaaaaacCCTCCAATTTCAACACCACTT
GGAtattaactttgatttcatccaaaTCCGgaattcaatataaaaattgC
AACCGAAAACCATTCGCACTTGATTTTTCGACTTAAGAGCAATAGAACTT
TTTATCCCCATAGGTATTTCGATAGAAGAATTTAACCCCGCTATGGGAAT
AACTTTGACTGGGGATGTGAGACAGTGGTGTTATAATTGTCGAAAAACCT
AATCGTTCTGGAGTTAAAATTGGGAAGGAAATGAACacttattaaatatt
tcccgttttccaaaagggaaatatttattaaaacgggctttctccataat
ttcccgtgtcaaaacgccttccgtacgccctgactgacgcccgttttt Run BLAST on NCBI transcript from alignment at sc0000224:220547..221544+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015979 ID=TCONS_00015979|Name=TCONS_00015979|organism=Clytia hemisphaerica|type=transcript|length=998bp|location=Sequence derived from alignment at sc0000224:220547..221544+ (Clytia hemisphaerica)
gaaaatttgcatgtcggatatatacgacatcggcaagtagagtgaaaatt
tgcatgtcggatatatacgacatcggcacggaaagggCTAGACAGAAACA
GTtgcagaaaacttttgaaattttttcattgtagTTACCGTAGTAACTTG
ACAGTGACAAAAATCGTTTTGTTGAGATTTCTCTGAGGTGGGTGGGCCAT
TTGAAACAAagttcctattagcagattcgtAACAAAGTTACGAATAAACG
TCGAGTTAAAGCTCTgatctttttgcattttttcagCATGTTAGGGTTTA
ATTCGGTCTGATATTGCTATTTTGCAGATGATGTGACTTTATTTCTTATA
TTATTTAAACATTTCTTACTTTAGTTTAATATTACATTTACTGGTGATTT
CAAAGACTTGAAAAGgggaatttttttggaaaaaaagtatcaagtggatc
tctgaatcaGTACATGTTTCTTAATCCTCTTTTTATGACAGAATTTTATT
TGAGAAGTGACGTGCCAATAccatattattttcatcaaaattataataca
cccctgtgtcacagacccgctgaaACCCAAGactcactggaaaatttggc
ctaaatttcatccccggtggaaaaaaaacCCTCCAATTTCAACACCACTT
GGAtattaactttgatttcatccaaaTCCGgaattcaatataaaaattgC
AACCGAAAACCATTCGCACTTGATTTTTCGACTTAAGAGCAATAGAACTT
TTTATCCCCATAGGTATTTCGATAGAAGAATTTAACCCCGCTATGGGAAT
AACTTTGACTGGGGATGTGAGACAGTGGTGTTATAATTGTCGAAAAACCT
AATCGTTCTGGAGTTAAAATTGGGAAGGAAATGAACacttattaaatatt
tcccgttttccaaaagggaaatatttattaaaacgggctttctccataat
ttcccgtgtcaaaacgccttccgtacgccctgactgacgcccgttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015979-exon-sc0000224-1491911889:220547..221544 | TCONS_00015979-exon-sc0000224-1491911889:220547..221544 | Clytia hemisphaerica | exon |
| TCONS_00015979-exon-sc0000224-1510915933:220547..221544 | TCONS_00015979-exon-sc0000224-1510915933:220547..221544 | Clytia hemisphaerica | exon |
| TCONS_00015979-exon-sc0000224-1575043694:220547..221544 | TCONS_00015979-exon-sc0000224-1575043694:220547..221544 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000224 | supercontig | sc0000224:220547..221544 + |
Blast
The following BLAST results are available for this feature:
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