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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015941 ID=TCONS_00015941|Name=TCONS_00015941|organism=Clytia hemisphaerica|type=transcript|length=1036bp
NNGGACACAAGAACAcggagaacacaagatttggattCGGGAATTCTGCG
AAAATGGGGCTGGCAGGAGGGCTTCACCCTCTTGCATAATAACCCACGAA
GAATATAATTAGGACTCGACGTGTTAAAGTTAGTCAATTTTCTGTACTTT
TTAATAATAAATATTTGCCATAATGAAGCTCGAAACAGCTTAAGCGCTTA
AGTAaacagctgacacacaacgttgtttcaacgttcatctaacgttatat
ggatgttgtgagcgttagataaacgttgaaaaacgttgtgtgccagctgg
gtagtttaaatttaattaaaaacatgACTGCATGGTAGTAtcttaatttg
ttttgttttaaatttgaaaaacacttcctttaaattgcaattttttcctA
AAGGTAGCCTACTATTCAAGCCGAACTAGTAAATAAAAAACGACATAGAT
TCCACGATAAGCGTTTATTTCAACAACATGAAAACCTTAAGACATCTCCC
GTATAATATTAATAAATTTTAGTTTAGGGTTTTAAGTTAAGGTTTTAATA
CAATATATCGTATATTCAATATAggtgaaattaagaatataACACGACAT
CTAATGGAGGAAtgatattgaattttttcttatgagcggaattgaaaatg
aagaagtttgaaagatcaaaattctttttgctCTGCTTTCTTACGCTTTA
TATTCAATACATCGGTGCTAAATTTTATTCAACACATTCGATCAAGCAAC
CAGACACCAATTGTTTGGTAAAATTTTTGGAATCAAAAAGCAACTCACTA
ActgagtgtatctcacgatgtCGAATAAAAGGACGAAGAAATTTGATGGT
TGACTACAGATGTTATTGTGTACCTCATGATGAAAAAGTTGAGGAGAATT
GCAAGATTGTTGAATCTGAGNGTgagcgttagataaacgttgaaaaacgt
tgtgtgccagctgggtagtttaaatttaattaaaaacatgACTGCATGGT
AGTAtcttaatttgttttgttttaaatttgaaaaac Run BLAST on NCBI transcript from alignment at sc0000222:414610..415645- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015941 ID=TCONS_00015941|Name=TCONS_00015941|organism=Clytia hemisphaerica|type=transcript|length=1036bp|location=Sequence derived from alignment at sc0000222:414610..415645- (Clytia hemisphaerica)
NNGGACACAAGAACACGGAGAACACAAGATTTGGATTCGGGAATTCTGCG
AAAATGGGGCTGGCAGGAGGGCTTCACCCTCTTGCATAATAACCCACGAA
GAATATAATTAGGACTCGACGTGTTAAAGTTAGTCAATTTTCTGTACTTT
TTAATAATAAATATTTGCCATAATGAAGCTCGAAACAGCTTAAGCGCTTA
AGTAAACAGCTGACACACAACGTTGTTTCAACGTTCATCTAACGTTATAT
GGATGTTGTGAGCGTTAGATAAACGTTGAAAAACGTTGTGTGCCAGCTGG
GTAGTTTAAATTTAATTAAAAACATGACTGCATGGTAGTATCTTAATTTG
TTTTGTTTTAAATTTGAAAAACACTTCCTTTAAATTGCAATTTTTTCCTA
AAGGTAGCCTACTATTCAAGCCGAACTAGTAAATAAAAAACGACATAGAT
TCCACGATAAGCGTTTATTTCAACAACATGAAAACCTTAAGACATCTCCC
GTATAATATTAATAAATTTTAGTTTAGGGTTTTAAGTTAAGGTTTTAATA
CAATATATCGTATATTCAATATAGGTGAAATTAAGAATATAACACGACAT
CTAATGGAGGAATGATATTGAATTTTTTCTTATGAGCGGAATTGAAAATG
AAGAAGTTTGAAAGATCAAAATTCTTTTTGCTCTGCTTTCTTACGCTTTA
TATTCAATACATCGGTGCTAAATTTTATTCAACACATTCGATCAAGCAAC
CAGACACCAATTGTTTGGTAAAATTTTTGGAATCAAAAAGCAACTCACTA
ACTGAGTGTATCTCACGATGTCGAATAAAAGGACGAAGAAATTTGATGGT
TGACTACAGATGTTATTGTGTACCTCATGATGAAAAAGTTGAGGAGAATT
GCAAGATTGTTGAATCTGAGNGTGAGCGTTAGATAAACGTTGAAAAACGT
TGTGTGCCAGCTGGGTAGTTTAAATTTAATTAAAAACATGACTGCATGGT
AGTATCTTAATTTGTTTTGTTTTAAATTTGAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015941-exon-sc0000222-1575043694:414610..415645 | TCONS_00015941-exon-sc0000222-1575043694:414610..415645 | Clytia hemisphaerica | exon |
| TCONS_00015941-exon-sc0000222-1510915933:414610..415645 | TCONS_00015941-exon-sc0000222-1510915933:414610..415645 | Clytia hemisphaerica | exon |
| TCONS_00015941-exon-sc0000222-1491911889:414610..415645 | TCONS_00015941-exon-sc0000222-1491911889:414610..415645 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000222 | supercontig | sc0000222:414610..415645 - |
Blast
The following BLAST results are available for this feature:
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