TCONS_00015930 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015930
Unique NameTCONS_00015930
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1852

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015930 ID=TCONS_00015930|Name=TCONS_00015930|organism=Clytia hemisphaerica|type=transcript|length=1852bp
CTTAGAGCAGAGTATGTACCAAATAATCCAGCAGAGCTGATTCCAACAGC
AAATCCGATCATGAAGCCCATTTTCATGCGATCAAAACATGATGGTCCAC
TTTGCATTGGGGGTGGCTGATAAGGCATATTTGATTAAAAATCTAAAtag
aaacaaaataaattaaCCTCAACAATGAAATACGAGTATATATTAACTAT
TTGGCTTCAAAGAGGATGTGAGAGGAGAGAGACCAGAGAGACTCCTACAA
ACACTTGCAATACTACCATCAGTCCGACTCACTGCTTTCGCGGCATTTTG
ActttgcctcgttttgaatatATATTCTTTATTTGGCGCATCTAAATGAA
GCGCCATATCATCATTTATAGAAACCGAAAGTTCTTtgtcaacaaaagaa
aaacttcacaCTGGGCTGGTCTCCAACATCTCCAGCTAGTACCATCTACT
TGCTCATTCAGCAAATGAGAATAGAAAATAATGGGGTCAAGAATTCCTGA
AAGATGGTTGGATTACAATGCAATCAATGAACCAATCGAAGGTGCCCCAA
TCATTGCTTTTAAAACTCCTTTGTCAGATCGTTATAATCGTCCAGAAGAT
AACACAGATGAAGAAGCCACATTTGTTGAAAAAGATGAAGAGTTCACCCC
GAGTCAACTAGTTGCAAAAGTTGAAGAGAAAGACCTCGAGCTATCAGTTG
TTGTTGACATCACATTCACTTTCCGATATTATAATGGCGTACACGAATTT
GAAAACAAGCACAATATACAATATGATAAAATCAAATGTCCTGGACAACA
AATACCACCTGATGAAATTATAAACAGGTTTGCAACCATTATGAATGATT
TCATATCAGAAAATGGTCTTGATGGTAAAAAATTGGTAGGATTACATTGC
ACACACGGTGTGAATCGATCTGGGTATGTGTTGGCAAGATACTTGATAGA
ATGGTTGAACTTTGAACCTGAAAAAGCGATAGAAGCTGTTGGTAAAGCCC
GTGGCTATCCAATTGAACGAGAAAACTATTTGCAAGATTTGAAAGAAAGG
AAAGCCAGAAAggGTTACGAGCAATGGAAAAATGGTGAAGATTTCATATC
AGACAAATCACTTTACAATTcagatgaaaattttcaaaacgacAATTACG
ATTCAACACGGCCGTTACAACAACAAGAACGTCACGGGCGTGATGATTGG
GATCGAAATTTTAGACCGCCCAACAAAGACGGGCGTAGGGACTATTATGA
TAATTACTATGATAATAGAGACGATCGAAACCGCCACCATTATCATCGAG
GGCGTCAACATAATAACAATTATAGATATCGGGATGACGATTATAAGCGA
CATCGGGAATATCGGCGTTCACAGAGAGATAATCAGACTTTTCAATCTGA
TAATTATGATGACTACAGTCAAAATAATGATGATAGTAAAAGGACTTCGC
GCGCTCCACGCTGGTAAATAGGGAAATTTTTAGATCGTTTGTTTTTAACT
AAactgttttaagtttttttatgtACTTCTAATCTTACTACAgtatatat
tttattattttacttCCATACTAGTTTTAACTTTATGTATATTCAGCAAT
TTGTGTTTGTGAATGCCCTGTAGACTACAATTATGGTCGAAACATATtca
gattttagtgtatttttaacgttttttataatttaaagttcggacgagaa
ttgctattttagcacttccactttcctTCATTGaacatttcgattttgga
ggggttcggtggcttctagactatattccaagccttattggagcaaattt
gagcttttaaagtctttaagtctcatgttaagagttaaaattctactttc
ca
Run BLAST on NCBI

transcript from alignment at sc0000222:147222..161152-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015930 ID=TCONS_00015930|Name=TCONS_00015930|organism=Clytia hemisphaerica|type=transcript|length=13931bp|location=Sequence derived from alignment at sc0000222:147222..161152- (Clytia hemisphaerica)
CTTAGAGCAGAGTATGTACCAAATAATCCAGCAGAGCTGATTCCAACAGC
AAATCCGATCATGAAGCCCATTTTCATGCGATCAAAACATGATGGTCCAC
TTTGCATTGGGGGTGGCTGATAAGGCATATTTGATTAAAAATCTAAATAG
AAACAAAATAAATTAACCTCAACAATGAAATACGAGTATATATTAACTAT
TTGGCTTCAAAGAGGATGTGAGAGGAGAGAGACCAGAGAGACTCCTACAA
ACACTTGCAATACTACCATCAGTCCGACTCACTGCTTTCGCGGCATTTTG
ACTTTGCCTCGTTTTGAATATATATTCTTTATTTGGCGCATCTAAATGAA
GCGCCATATCATCATTTATAGAAACCGAAAGTTCTTTGTCAACAAAAGAA
AAACTTCACACTGGGCTGGTCTCCAACATCTCCAGCTAGTACCATCTACT
TGCTCATTCAGCAAATGAGAATAGAAAATAATGGGGTCAAGAATTCCTGA
AAGGTAAGAATAACAGTACTATGTTTATTTTCTTATTTCTTTTGTGGTCA
AACTTTGAAATATTTATATTTCAGAAGCGTTTTTTTATGAGAATTTTCAA
ACATTCCTCATTTTCTTCATTATTTGCATTTTTATGGGACAGTTACATCA
AAATGCCTCGAAAATGTCAATATGAAAATTGCGTAATCAGAGAACGTATG
TCTCGCTCATTATAAAAAGGCCGACACAAACTTTCAATAATTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTTTTTTTGCGTCCTT
TTCCGTGATTACTTTTATTTATATTTTTAAAGACAGGTAAGAAGGCATAT
TGATGTAACTGTGGGATAACATGATTCTTCATTCAAAGTTATTAAAGGTT
TGCTTGTGAAAGTTTCGTGACAACCCATGGTTGCAGTCTTAACAGTTTGA
GATATTGGAATGACATTTTGTTAAAAGAAAATTGTCTTTTTTTATATCAA
AATCTGCAACAAAAATGAAAGTAGTCTCTTCTACTGATTACTTTGTGGCG
CTCTATTCAATTTGCAGACTATTTATTCAATTTCTACCAATAAGATTTTC
ACATTTCACATAACTTTTTTGGCACCTGTGGCCTTTCAGTCCCTTGCCCA
ACGGGCGGCTGTAAAATATCACCCTCCCATAATGGGCCATTCCAGAATTT
GTCTGTAAAAACAGGGTGTGGATGACACAGGATTTCCAAGGGCAAAAGCT
TTCACCAAAATTCGAAATTTCCAAGGCGAGAGAAGGAAATGTATGAATTT
CCAAGGCAATTGAATTAAAAAAGGCAAAAGAGAGTGGAATTTCCGATGCA
TTTTGCAAAAGTACATGGATTTTTATCGGAATTTCCGACCACCACTGGAA
AAGAAAAATTATTTCCAAGGCTAGAAAAAAATTAAAAATGCACGTCATCT
GATGGGGGGTATATACAGTAACAAAAATTTTCTGGAATGGCCCAATATAA
CACCTCTTTTATTTGTTTCAATCCACCATGATCCTAAGGTGTAGACTTTT
TCTCATCTTCAATTTTCCTAAGAAAGCAGAAATTTGATGCAAGAGTTAGA
TTGTCAACAAAGTGCAGTAAAAGAACTTAAAATAGGAAATATTTTCATTT
TGAAGAATTAATGCAAAAAAGTGAAACATAGAAAAGTTTTATTCTTTTAT
GCTTTAATCGAAATGGGGGATTTGGAAAATCATCTATGTTTAGTTTTTTG
CACAAATCCCTGTAACTATAGGCAAGCACCCTGTTGCTAAGATGCTGACT
TGAAATCGAAAATGAAACCACTGAAAAAGAAAGTAAAATCGGCCCGCACT
CCAAATCTCGTAATCTTAATATAGGAGTTTTTAAGTCTATACTGTCTCCT
AGAACAAGCACTTCTTATAAAAGTCATAACATTAGAAGACGTAAATTTGA
ACTGAAGAGCAGCAACAAAGGTGCAAGAATAATCCTTATTCAGCTGAAAG
TAGATTATATAGTCTCCTGGGAATATAGTATGACCAAATGACATAATATT
TCAAATCAAAACATTGATCTTAACCCCCTGTGTGCACTCTCTCTGTCCAG
TTTTGCAGAGTATGCAGTCCTGGCAATTGGCCGCGGCACGAGGCAAATGC
CGCGGTAAAAGCTGCCGTAAATTTTGCCACAGTAAATTTTCTGACAAATG
TTAATAAAATCAAAGAAACTTCAAAAGTGCCAAATCGTTTAAGTTCTTTG
TTTTCTGATCTATAGGAGACGTCTAGTACTTTGGATGACATAGGCTGTAT
AGGAGTTTCTCAAGTCAAAATTCAATATAAACAAAAAAATGCCGCGGCAA
AATGCTGTTTTGCCTCGGCAAATTTGATAAAGAGCATTTTGCCGCGGCAA
AAAAATGCCGACGCAAAAAAAGCTGAATTGCCAGGGCTGAGTATGGCAGA
AATCATTGAGATATTGGGGGCAGGCGTGCTCCATTCTCAAGAGCAACGGA
AAATTAGCCAATTTCGTTAGTTTTTCTGGCTCTTTTTAACAGCTTTTCTG
GAACTTACAAAAACTTTAGGGGTAGGGTTTCAATGATATAATTTTTCCTT
GGGGGCAGCCATGACATGCTCTGAAAACTGGCTCTGTCTTTGTGTATTTT
TAATGGTATCAAAACAGATAATGCTATTCTTTAAGAGCAGTTTTCTAAAA
GGTTTTATGTTTTGTATTTTATTTCCTTTTTTAATTATTTAGTTTGATCT
TATATTGTTTTAATGTAAAATTGTAAAAATATATCTTCTGAAGATCCATA
TGGCTTTCTTATCTTTGTATAAACTTCCATATTATATGTTTTGCATATTT
TTCAACTAAATTCAACCACAGCTTTTTCGTTTCTGTATTTTTGTATATAA
TCCAAGATGGTTGGTGGAAAAGCAAAAAGGTCTATTGAAAGTTTCATGTT
CTATTTCCAGCAAAGGAAAGAAATTAACCTGATAAAACTCTTTCTACACT
ATAGGGAAACAAAATTTCAAGATATGTCTTTAATGCTTTAAAATTTCCTA
ACGAGGAAAGTTATTCCTTCAGGGTGGTATATCTCAAAGCTTTATTTCCA
GCAAAGGAAAGAAATTAACCTGATAAAACTCTTTCTACACTATAGGGAAA
CAAAATTTCAAGATATGTCTTTAATGCTTTAAAATTTCCTAACGAGGAAA
GTTATTCCTTCAGGGTGGTATATCTCAAAGCTTTATTTCCAGCAAAGGAA
AGAAATTAACCTGATAAAACTCTTTCTACACTATAGGGAAACAAAATTTC
AAGATATGTCTTTAATGCTTTAAAATTTCCTAACGAGGAAAGTTATTCCT
TCAGGGTGGTATATCTCAAAGCTCTGTTTGTTAGATGTCATTTTATTCTG
CACATAAACTGTATTCCCTAACTTTCCATATAAAATTTACAGGAAATGCA
TATTTGGATTTTGTACCCAATGCTGCACACAAGCACTCAAACTAAATCTA
TCTATCTTTCTATATATTTAAGTAGTATTTAAACATGAATGTTCATTATT
AGGCAATTACTTTTTTATTTTCTGGTTTACGGCCATTATGAGGAAAAGTT
TTGGACAGGAGGATGGAAAAAGAATAAAAATGAAATTGATGTTTTAGATT
TTTTTTATTTTATTTTTTAAAATCAGAAATCGGAGGAAATAATAAAACAA
AATTTTATGACATTTGCTAACTATCGATTTTTTGAATAAGTCTCTCTTCA
CCAACTCAACTTATTTTTAGCACATAGCAGGAAAGATGTACTCTTGGAGT
TTTTTTTTGTGGATAGGGAAATTCCATGGGGAAGTTCCCTGACATTAAGG
GAAGGATCAAAGTATCTTTACATTGGCAGAATAGGGCACAGCTTTGTTAG
ATCATTTAACCCCCTATCTCTTTCTCTTCTTTTCTTTTGTTTTCCTGTTT
TTGGACCTACCTCCGGGTACCCCGGTTGAGGTCCTTTAAATTAACCCATG
TCCGTCCGTTCGTTCGTTCGTCTGTTGCCAGCTTTTCTCAGGATTGGCTC
ATTAGTTTTTTTCTGATTTTTGGCATAAAGATGCAAAATGGCAATGCCCA
AAATGTGACAGAGCCGGTTTTCGAAAAAAAAATTTTCCGGCCGAAAATAC
CGGAAATATACCGGAAAAACTGGTTTTTTGACATTTTCTCGAGATTTTAT
CATTAGTTTTTTCTGATTTTTGGCTTAAAGATGCGTATTAACAATGCCAA
AATATGACCGAGTCCAATTTTTGAGAAAAAAAATTTCCCGGTCGAAAATG
CCGGAAATATGCTGGAAATCGCCGTTTTTCTGGATTTTCATTGGATTTTT
TCTTATAATTGGTTGTTTTTTCATTCAAAAATATTATTAATAGCAATGCC
CACCATCAAGCATGTTTCAATTTTCAAAAAAATATTCAAAAATCGCCGGA
ACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGAGCTGT
ACTTTATATTTTTTTATGAAATTTTGCACACTGATGCAAGATGACAATAC
CTAAAATGTGACGGAGCCAGATTTTCGAAAAACATTTTTATGCCGGAAAA
ACCAGTTTTTTGACATTTTCTCGAATTTTCATCCTTAGTTTTTTCTGATT
TTTTGCAGAAGGATGCGTATTCGCAATACTCAAAACATGACCGAGTTTGT
CTTTTGCGAAAAATTCTTTTCCGGCTGACAATGCCGGAAATATGCCGGTA
ATCGCCGTTTTTGCAGATTTTCATTTGGCTTTTTCCTTATTTCTTTCTTT
TTTCACACAAAAGCATTATTGATAACAAATCCCACCATTAAGCATGATTC
AATTGTCAATAAAACTGATTTTTGCAACCGGAACTTTCTATTTCTATTTT
CCCTACTCCCCTTCCCTCTTCACCCATCAACAATCAATGATAAGATTTAA
TGTGTTATGCATTTTTGCATAAGATTTAATGTGTTATGCATTTTTGCAAA
ACGCTATATCGTCTGACTGATTGTTTTCATCTTTCTCCTTATTGCCTTAT
TATCTAGCTTTCATCATCAGGTAGGTCCATTCAGCATGTTGCTTGTTTTA
TTTATTTCTTCTTTTTTGAAGATCAGAGGAGAAAAAGTATATAAAAGTTT
TTGAAATCTCCATTTTTTTTTTATTTTGGCAAAAATAATGTCGGCGGATC
CGTAAACCAATAAATAAAAAAGTATTTGCCTTACTACATATAAAATAAGA
ATAAAGGTTAAAATATAGTGAAAATGTTTATGTTTATTCAAATATATGTA
ATCAAAATCTTTATAAAATAAAAATATCCTTGTCAACAGAGAAATTATCT
GCAAAATATTAAGTCACTGGATGTATAGTTAGGATTGCAAAGAGTATTGA
CTCCAAAAGGACCAGAAGAATCTGAAGTGACTCAGAAAAAAAAGTACAAA
AGTGGGGAAAAAATCAGTTTTTCGAAGTTTGTAAAAAAACGCCACATACA
CTCATTGCGTTTTATAAGCATACGGTAAATTTCGGCTGAAGCTCACTATG
CTTAAGTAAGACTCAATTTTGAGCCTCGACTATGCTTAACCCTATGCTTG
GTAAAAAAATTATAAAGGGGGGTAAAAAATTTCGCGCATTTTCCCCTATC
TTTAATCTTGAGAGAAATGAAGACATTCTATTGTTTTCGAATGTTGTTGT
TATTATAAGTTGTGTTATTTATAAGAGATTGAACAAAAATAAAATCACCA
ATTTTGTTTGTAATTCTATTCTTCATTCTTCTGTTATTTTCTGAAGTTTT
AGAAATTATGATTCTAAAAATTTCTTTGGCTGAGCCTCAAGGTATGCTTA
GCATATGCTTAATTTTTCTGGAAATTTGAGCTTCAGTATGCTTATAAACG
TTATGCTTATAAAACGAAATGAGTGTAGAAGATCTTTCAATTTCAGTATG
TGAATAGAGCAGTAAAAAATTCAACTTTTCTATTTTTCCTTTTTTTTTGA
TAATCAATCTTTGAGGCTCAATCCTGAAACCGCGCAAAATGGTAGAGCTT
AGCTGCGGCAGATCATTTCGGTATAAGTGGTTGGAAAATGTTTACAAGGT
TCTTGACAGAAAATCCTTGTTTGATTGTCAATCATGACAATGTAGTTATT
AATTTTGTTAGATCTGACAAATTGATGTTTGTGAATTCACTTTATAGTTT
TGATTCCCACTGAAATGAAGTATCTTATTCTGGTTTTCATGTTATTAGAT
GCTGTTTTAGTGCTTTAGAGCTAGCCAGATAGATCAGTTTTTACTTATAA
AACTAAATAGTCATTTTTAGGGCCCTTTCCTAATTTGGGTAGTTTTTTTC
CTAGTTAAGAAAGCCTATTAGGTAAGTCAAGAAAATTGTAAAATACTTTC
CTAATTAAGAGCTTTAAACTGCAAATTACCTTAAGTGGATAAATTTTGGT
GTGGATTTAATTCAGCAATTGGCCAAAATACGATTTTTGGCGGGTTTTGG
TGATAGATCTATTTCGTAAAATTTGGCGAAATGGAAATTTTGTCACACTG
AAATGGGTGAAAATTGCTCAAAAATATACTAAAAAGTTGTGATTTTTCAC
ATAATTCCCTTTTTGTTAAATTTGGCGGAGATATAATTTGGCGAATTGCC
GAATTTAGAAATTTTGGCGAGGATTTAATTTGTCAAATGTTAGCCAAATT
CGCCAAATTCACCAAATTTAATCCCCGCCAAAATTTATCCACTTAAGGTA
TGTGGTAGTGCAATTATCTGCAATCTAAACCTCTTACTGAAATATTTTTC
AACGGATTTATTTCTTGTAGATGGTTGGATTACAATGCAATCAATGAACC
AATCGAAGGTGCCCCAATCATTGCTTTTAAAACTCCTTTGTCAGATGTAA
GTTATAATATTTGTCAAATATCTTCTTACTTAGAAATATACCGGGTGTGC
CAAATATAACTTACTCTTCTTGAAATGATATTTATCAAGCTTTGACTTTT
TAAAGAATCTATGGAAAGAGGAAATAGAAACTTAATTTTTGATAGGAGGT
TTAAACGTCCTCCAGCGTCCTCCATTAACTTAAAACCGACTATACAAAGA
CCTTCCAAATTTCTATTAAATAGTTTTTAAAATTTTTGAGCAAATTAAGC
CTCCTGAAAGTACGAAAGTTGAACACTTGAACACATGTACAACTAATTAT
TATTTATGTTGGTCAAGAAAATAAATCAAGCAATTTCATGTATATATGTC
GATCATTTTGTATCTTTCAGCGTTATAATCGTCCAGAAGATAACACAGAT
GAAGAAGCCACATTTGTTGAAAAAGATGAAGAGTAAGAACTTTCTTTTCT
GACTGAAAAATCAGCTTTCTCAAAAATGAACTTTAATTTTAAGTTACCTA
TATGGAACTATTTTTTTTTTGGAAACTTACAAATTATCACAAAACAAATT
TTGCCTTTTTTTGGTATCTCAAAGATTGAGCTTAAAATTTTATTGATGAA
TAATGAAAATGATTATTATTTTCTTATTGAATTATTGATCAAATAATTTT
GCTTGGCTCCAGTTTCACAAAATTTACATAAAGAATTCTGTTGAGCCTAG
TTGAGCATGTAATTTTGACCATGTTTGATCTAAATAAAATATAAAATACT
TCTTTTGGTATAGGTTCACCCCGAGTCAACTAGTTGCAAAAGTTGAAGAG
AAAGACCTCGAGCTATCAGTTGTTGTTGACATCACATTCACTTTCCGATA
TTATAATGGCGTACACGTAAGAATTACAAAAAAACTTATTACATGTTTGT
TAACTACACATACACATACAAGTCATTGAAATAAATAAGAAACTAGTTTA
AAAAAGACGATTTTACGATATGAGGGTACATGTTGATTGTATCTATATAT
TAATAGCCGTAGTCTGTATGTCTGTTTGTTTGTTGGTTTGTTTTTTGTGT
GTCACTTTCGTTTTCGCAAGCAATGTTTTGTTTTTTCAAAAGATGACTTT
TGCTTCTTGCTCCACAAATCGTCGCATCAAAATAAGAAAGCCTTAAGTCC
ATTTTTCAAAAATTGAGTTATGACCATACCGATGCTTTACACCCCATTTT
TTATCGAATTTTTGGCTTAAATCCATCAAAAACCAACCTAAAGTGGCCTA
ATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTC
AAAAATGGCAGCCATTTCAAACCTTTAAACTTGATTTTCTCAAAACTACA
AAAATGGACTTAAGGCTTTCATATTTTGATGCGACGAAATGTGTTAAATC
AGATTCGCGCCGTTTTATAATGACGATATGTTTTGATTGATAGATTAGAC
TTTTTCTTTTTGTTTTATGTTTTCGAATGTAATTAACGACCTTATTTGAT
TTGAGACATTCGAATTCTTTTCAAAACAAAAGAAAATCTTTTAAACAGAA
TCTGTTAAAGAAAAGAACAAATATAAAATAAAACATAAGAATCACAAGAC
AAGTTTGTTAGAACAACAGCAATATTAAAAATACATTCAAAAGGCGGTAA
CAACTAGAGTTCTTTCTTCGTAAAAAGGGACCTTTAAACATCTTTGTCGA
TAATTATTTTGCTGTAAATCTAAGTCATTGTTGAATTTGAAAAGTTATCG
AAGTTATGACGAAGTTATTTTATAAAAAGCAACATAAAATTGCGCTATCA
CTCTTTTTTGTCTGGTGTCCTAGCTGCCTTCCGGGGGGACTATGGTTGTG
AGCTGACTTTCGGCCCTGCCCCTCGGACCCTTAGCAGAATTAAGAGGAGA
AGAAACAAGAGAAATCGTGTGAATTTTAATTCACTTTTTGGAACTAATTT
AACCAAATTTCTATCTTTCTGGGGACAAAAAGTTGAAATTTTCCTATTTT
TCCGATTCTTAGTGGGACTGAAGTTAGATTTTCCGATTTTTCAAACTGCC
ATGTTTCAAAAAAGGCACATACCCATACCCTTCTCTTGCCTAAGTACATC
TTTTAAACTTTTAAGGATGTTTTAAGGGTTTTGCATCATTTTGTTTGTAA
CCTCAAAATTTTTAGTATTGTGTATTTTGGTCTAATGCCAATTCAAAACC
TGCTTTCTTAGGAATTTGAAAACAAGCACAATATACAATATGATAAAATC
AAATGTCCTGGACAACAAATACCACCTGATGAAATTATAAACAGGTTTGT
ATATCCATCAACAACGGTTTTATGGTATCACTGCATTGGCTAAAATTTGC
TTTCAAAACTGTTTTTTTTTGTGAAAATAATCCTTAAAGATCTTAGTTTT
CAATCACTTTTTTTAATTTAAAGTTCTCCCAATACATTTTGAAAAAGCAA
AGGAAATGATAAAAATTTGCTGTCCTTTTTATGTGATTTTCAGGTTTGCA
ACCATTATGAATGATTTCATATCAGAAAATGGTCTTGATGGTAAAAGTGA
GTAACTACTTCCTTAAATAGATAACGCGTAGACCTTTCTTTCTCACACAA
ATCGAAGATCTAAAATTTATGCGTGGACAAAATTTCGCTAATTTTTAAAG
AAATTCCCTTTATGTCTGCTAAAGATTTCGACGAGAATCCTACAAACTTT
TTCTTTAATTTTTCCAAATTAATTTTTCCTCAGAATTGGTAGGATTACAT
TGCACACACGGTGTGAATCGATCTGGGTATGTGTTGGCAAGATACTTGAT
AGAATGGTTGAACTTTGAACCTGAAAAAGCGATAGAAGGTATGTATAGTC
TTGCTTTATGAAATCTTTTTAGTCTAATCATGTTACTTTTAAACAGGATC
GTATGCAGACTCCATAATTTGAGCCCTCGAGTCTTAGCAACCTGGTTACT
TAGAGAAGAAAAATGTTAACTTATCTTATTCTTTTGAGGGGTGCCTTTAG
AACCAGAATTTGAATGGTAGCTTTTTATTCTTTATTTGATTTAAATTTAA
GCTGTTGGTAAAGCCCGTGGCTATCCAATTGAACGAGAAAACTATTTGCA
AGATTTGAAAGAAAGGAAAGCCAGAAAGTAAGTTATTATACTGTGTACTA
TCGTTCTGATTTCATTTTGATGTGCGGTGGCGTTGGCTGTAAATGTAGTT
TAGAATGATTATTTTCTGTGTACTCTTTGATTTAACCTATATTCATGGTT
TACACCACTGGAGAGCCTTCCAAGAATTTTCAAAAGTTTCCACCCAATAC
GTCATTTTTTTCTACTTTTTAAGTGACGTATTGGGTAGGAAATTTTAAAA
GTTCTCAGAAGATTCTCCAGTGATGCATATCATGAGTTATTCGAATGTTT
CCTTATCTCGAAGTATCTCTCAAAATTATCTCCTTAATTCCAATCGTTCT
CTAATTTTGAAGGAAAACAACCTTTAAAATCGTTCGAGAGGGAGAGGTAA
AAGTAACCTGTAAGATATTTATTCTTTTCACTCTGGTAAACAATACAATC
TGCCATTTGTAGAGAGTTTTATCTTCTCCCCATAGAGTGCTCGATAAGTA
ATTAGAGCGTTACTATAAAGTTATCTGCCATTGAAATCTTTCAAAAATAT
GACCACATACTCAAGAATATGGGTAGTAAAATTTGCAACACGGAGAGGAC
CTGAAAGTAAACAAACATGATCTACCATTGGAATTCTCCAGCGCGCCGTT
TTGCTACCTACATTCATCAAATGAGACATCAGAACGAAGAATGTCGATCA
ACAAACCAATCAGATGACGATATGCATACAATATTCCTATTCCTTCCATA
CAAAACAATATTCCTCATTTTCTTTACTAGCGGTTACGAGGAGTATAATG
AAACCAGACCGTCTGCGTTCAATGTGAGAAAAACTATCGATTTGAGTGCA
TCATGGGACGAATGGATTCACAAATTCGAAGAGTTTTCTAATNGTTCAAT
GTGAGAGAAACTATCGATTTGAGTGCATCATGGGACGAATGGATTCACAA
ATTCGAAGAGTTTTCTAATAAGCTTCAGTATACTGGTGCTAGAAAGGAAC
AGTCTTTGTTTCGCTTTGCTGGAAAGGAATTGCAAGGAATTTATCAATCC
ATTGATCATTCTGGAGAGGATTATGACTCAATACTAACGGATTTGTTTTT
GTATTTCCATGGTGATAAGCTTTCGACGAATGTGTCTTACCATCGGTGTT
TCGTTTTTCGACGGACCCTTATTCGTGCCGGTGAAGGTTTCGCAGAATAC
GTCGATCGGTTAAGAACGGTAGCCGAAAAGTGTAGTTTTGTGAACACTGA
TGTTGAGATTGTAAATCACGTGATTGACAAATATGCAAGCGATGCATTAC
GTAATGTACTAATACGTCAACCAGAATTAACGTTAGAGACAATGATTGAA
TTGGTGTCTCAAAACANTTACGTCAACCAGAATTAAGGTTGGAGACAATG
ATTGAATTGGTGTCTCAAAACAAACATCTCCAAAAAGAGAAGAATAGAAA
AGAACCGGTTACCGAGGAAAACGTTGAAAAACCTAAAGATAAAAATAAGA
AAAGTAAAAAGAAGAATAAGCCGAAAACTGCAACAAACTCATCTACGAAA
GATATGGACAAAGATACCTCTAAGACAAAACCAAGCAAATCGAAAGACAA
AAAACTTGTATCCAAACCTTCAAAACGCCAGAAGCGAAAACCTTTTACGT
ATTATTTTTGGCTGAACAATGCATTTGTATTTGTAGCTCTAGGATTTTTG
TTCAAGCGATAATTCTTTATATATCTCGATATATGCTTATATAACCAATC
AAACAACACTTGCACGATCGAATTTTGTATACACACCTTACAGAAATAAC
ACAACTAGTTTCTTACATACAAATCACCCACTGTGTTTTTGTTAATGTTT
ATTTTGAGAGTTCGAAGTTTTGGAGTCTTCTTCATCGAACAGTTCTTCTA
GAATAAAGTTTATAAAACTGTGAATTACGTTCCTTAATTACTTTTGCCAT
AGTTTATGCTCTGACCGCAAAGAAAAATTTTGTTTTTCAGGGGTTACGAG
CAATGGAAAAATGGTGAAGATTTCATATCAGACAAATCACTTTACAATTC
AGATGAAAATTTTCAAAACGACAATTACGATTCAACACGGCCGTTACAAC
AACAAGAACGTCACGGGCGTGATGATTGGGATCGAAATTTTAGACCGCCC
AACAAAGACGGGCGTAGGGACTATTATGATAATTACTATGATAATAGAGA
CGATCGAAACCGCCACCATTATCATCGAGGGCGTCAACATAATAACAATT
ATAGATATCGGGATGACGATTATAAGCGACATCGGGAATATCGGCGTTCA
CAGAGAGATAATCAGACTTTTCAATCTGATAATTATGATGACTACAGTCA
AAATAATGATGATAGTAAAAGGACTTCGCGCGCTCCACGCTGGTAAATAG
GGAAATTTTTAGATCGTTTGTTTTTAACTAAACTGTTTTAAGTTTTTTTA
TGTACTTCTAATCTTACTACAGTATATATTTTATTATTTTACTTCCATAC
TAGTTTTAACTTTATGTATATTCAGCAATTTGTGTTTGTGAATGCCCTGT
AGACTACAATTATGGTCGAAACATATTCAGATTTTAGTGTATTTTTAACG
TTTTTTATAATTTAAAGTTCGGACGAGAATTGCTATTTTAGCACTTCCAC
TTTCCTTCATTGAACATTTCGATTTTGGAGGGGTTCGGTGGCTTCTAGAC
TATATTCCAAGCCTTATTGGAGCAAATTTGAGCTTTTAAAGTCTTTAAGT
CTCATGTTAAGAGTTAAAATTCTACTTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008895XLOC_008895Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015930-exon-sc0000222-1575043694:160650..161152TCONS_00015930-exon-sc0000222-1575043694:160650..161152Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:153557..153632TCONS_00015930-exon-sc0000222-1575043694:153557..153632Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:153121..153182TCONS_00015930-exon-sc0000222-1575043694:153121..153182Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:152687..152789TCONS_00015930-exon-sc0000222-1575043694:152687..152789Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:150809..150891TCONS_00015930-exon-sc0000222-1575043694:150809..150891Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:150557..150609TCONS_00015930-exon-sc0000222-1575043694:150557..150609Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:150265..150369TCONS_00015930-exon-sc0000222-1575043694:150265..150369Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:149976..150051TCONS_00015930-exon-sc0000222-1575043694:149976..150051Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1575043694:147222..148012TCONS_00015930-exon-sc0000222-1575043694:147222..148012Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:160650..161152TCONS_00015930-exon-sc0000222-1510915933:160650..161152Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:153557..153632TCONS_00015930-exon-sc0000222-1510915933:153557..153632Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:153121..153182TCONS_00015930-exon-sc0000222-1510915933:153121..153182Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:152687..152789TCONS_00015930-exon-sc0000222-1510915933:152687..152789Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:150809..150891TCONS_00015930-exon-sc0000222-1510915933:150809..150891Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:150557..150609TCONS_00015930-exon-sc0000222-1510915933:150557..150609Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:150265..150369TCONS_00015930-exon-sc0000222-1510915933:150265..150369Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:149976..150051TCONS_00015930-exon-sc0000222-1510915933:149976..150051Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1510915933:147222..148012TCONS_00015930-exon-sc0000222-1510915933:147222..148012Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:160650..161152TCONS_00015930-exon-sc0000222-1491911889:160650..161152Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:153557..153632TCONS_00015930-exon-sc0000222-1491911889:153557..153632Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:153121..153182TCONS_00015930-exon-sc0000222-1491911889:153121..153182Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:152687..152789TCONS_00015930-exon-sc0000222-1491911889:152687..152789Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:150809..150891TCONS_00015930-exon-sc0000222-1491911889:150809..150891Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:150557..150609TCONS_00015930-exon-sc0000222-1491911889:150557..150609Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:150265..150369TCONS_00015930-exon-sc0000222-1491911889:150265..150369Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:149976..150051TCONS_00015930-exon-sc0000222-1491911889:149976..150051Clytia hemisphaericaexon
TCONS_00015930-exon-sc0000222-1491911889:147222..148012TCONS_00015930-exon-sc0000222-1491911889:147222..148012Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000222supercontigsc0000222:147222..161152 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.75643	2.36707	3.74948	3.79251	53.9099	40.8114	20.5192	23.945	10.6365	14.843	9.36545	10.3818	8.83072	9.80163	9.87299	14.8729	9.65636	10.7667	3.52381	4.46371	6.60452	5.72369	8.41131	8.70274	20.1833	21.6092	6.53316	5.71321	5.79468	6.74808
Blast
[Close]
BLAST of TCONS_00015930 vs. Swiss-Prot (Human)
Match: DUS11 (RNA/RNP complex-1-interacting phosphatase OS=Homo sapiens GN=DUSP11 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.785e-37
Identity = 75/195 (38.46%), Postives = 113/195 (57.95%), Query Frame = 1 
Query:  484 GSRIPERWLDYNAINEPIEGAPIIAFKTPLSDRYNRPEDNTDEEATFVEKDEEFTPSQLVAKVEEKDLELSVVVDITFTFRYYNGVHEFENKHNIQYDKIKCPGQQIPPDEIINRFATIMNDFISENGLDGKKLVGLHCTHGVNRSGYVLARYLIEWLNFEPEKAIEAVGKARGYPIERENYLQDLKERKARKGY 1068
            G+ IPERW DY  + + + G   IAFK PL   + +           +  +E F+P  L  K+ E++ EL +++D+T+T RYY      E    + Y KI   G Q+P DE I +F   +N F+ EN  D  KL+G+HCTHG+NR+GY++ RYLI+     P+ AIE   + RG+ +ER+NY++DL+    RK +
Sbjct:   28 GNHIPERWKDYLPVGQRMPGTRFIAFKVPLQKSFEKK----------LAPEECFSPLDLFNKIREQNEELGLIIDLTYTQRYYKPEDLPET---VPYLKIFTVGHQVPDDETIFKFKHAVNGFLKENK-DNDKLIGVHCTHGLNRTGYLICRYLIDVEGVRPDDAIELFNRCRGHCLERQNYIEDLQNGPIRKNW 208
The following BLAST results are available for this feature:
BLAST of TCONS_00015930 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DUS112.785e-3738.46RNA/RNP complex-1-interacting phosphatase OS=Homo ... [more]
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