TCONS_00015924 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015924
Unique NameTCONS_00015924
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1273

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015924 ID=TCONS_00015924|Name=TCONS_00015924|organism=Clytia hemisphaerica|type=transcript|length=1273bp
TTTAGATGCTccaacaaaaaataatatactattgaaataaacaaaaacaa
acacaacaAAATGAGTAATGGTCAAGTGATTACTGAACTTTTTGAACAAA
TTGTTCACTCTGAAGAAagaatcaaacaaagatttgaagaTCTGAAGAAA
GttaatCAAGAAATCCAAAACCACCAAGCTAAAATCAAATCCATCAAATA
TCAGAAAGATTCATTGCTTGGTAAATTGAACAACATGCGCCACAAATTGC
TGGAAGAACAGTTAGAGGAGAAATGGATGAACATTCGAAAAGATATTTTA
TTCACACAGAAAGAGAAATGTTTTAATGAGAAACACGAACTGGTATTTGA
GCTAGAAGAAATACAGGACAGGCAAAAGACAGACAGtgcAAATTTCTTGG
AAGCATGTGATTGTTTCCTTGAAGACTTTGACGTTTTAAGCGGCAACGGA
ATCATTGAGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATTTGAA
AATCGAAGAAGACTCTCTGAAGAaagACATTTTCGAGTGTGAAAAActgg
aagaaaaaagaaatgagCTCAAGGATGATCATGAAAAGCTCAAACAAGAA
ATTGAAGAACTGAtgaaaaacaaagatgaatgcaaaaaaaaattgttgag
cGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGGTTTTCTCC
GTAAGTTACAAAACAATACGAATCACAGAAGTCTACAAAACGAATTGGAC
AGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGAAACATAACCTCGA
GCGACAACTAGCTGATCAGCAACGTAAACGGAACATTAACAATGTGGAAA
CCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAATACAACACCTGGT
TTCTCTCATCTAAATCACACGACGGTTTCTTCAGCATCATCGTCATCTTC
GACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAAAAGAC
CAGCTAATGATGACGTCTTTTCTGATATGACGTCAATGTCACGTGATAGC
TCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACGATAGAAACAGTTT
TGACTTTGATATTGATttAAGTGATGATGATATGCTGATGACATCATatt
tgttacaagaaaaatgatCACTTGGATTCTGGTGTGTGCTAAAACCAGAA
ACAAGTATAGACCAGGCGATGACTCACGGTCGCGCAACCTTTCGATAGAA
AAACCCCCATATGGTTTTTTGTA
Run BLAST on NCBI

protein sequence of TCONS_00015924-protein

>TCONS_00015924-protein ID=TCONS_00015924-protein|Name=TCONS_00015924-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MSNGQVITELFEQIVHSEERIKQRFEDLKKVNQEIQNHQAKIKSIKYQKD
SLLGKLNNMRHKLLEEQLEEKWMNIRKDILFTQKEKCFNEKHELVFELEE
IQDRQKTDSANFLEACDCFLEDFDVLSGNGIIEKKQSILQQRLSNLKIEE
DSLKKDIFECEKLEEKRNELKDDHEKLKQEIEELMKNKDECKKKLLSAQS
DCKKMKDVKEGFLRKLQNNTNHRSLQNELDRSKKKLQYLTDEKHNLERQL
ADQQRKRNINNVETRQSNPWYISRPNTTPGFSHLNHTTVSSASSSSSTRR
FQYSVNKGASRKRPANDDVFSDMTSMSRDSSQNSQYSQNNRNDRNSFDFD
IDLSDDDMLMTSYLLQEK
Run BLAST on NCBI

transcript from alignment at sc0000222:85703..90314-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015924 ID=TCONS_00015924|Name=TCONS_00015924|organism=Clytia hemisphaerica|type=transcript|length=4612bp|location=Sequence derived from alignment at sc0000222:85703..90314- (Clytia hemisphaerica)
TTTAGATGCTCCAACAAAAAATAATATACTATTGAAATAAACAAAAACAA
ACACAACAAAATGAGTAATGGTCAAGTGATTACTGAACTTTTTGAACAAA
TTGTTCACTCTGAAGAAAGAATCAAACAAAGATTTGAAGATCTGAAGAAA
GGTATATGTTCTCTTTTGTTTTATTCGCATTTCTAGTTTAGATGACTGTC
AACTTTCTTCCCTGCCTATTCTAATTGCCAGAGTAGGCAAAAAGTTGGCA
GTTGAAGTCGTTCTAAAAAAATTGAAAGAAGTCAAAACTCACTGCTTAAG
TTCCCCTTAAAGACACCCTCTAAATTTAGAAGTCAGAAACTATGACTTTC
ATCATCAACGACCTGTATATTTTTTTATTTTAGTTAATCAAGAAATCCAA
AACCACCAAGCTAAAATCAAATCCATCAAATATCAGAAAGATTCATTGCT
TGGTAAATTGAACAACATGCGCCACAAATTGCTGGAAGAACAGTTAGAGG
AGAAATGGATGAACATTCGAAAAGATATTTTATTCACACAGAAAGAGAAA
TGTTTTAATGAGAAACACGAACTGGTATTTGAGCTAGTAAGTTAAGTTTG
GTTTAGGGAGACGTTTGGCATTTTTCTTTGCTATATTATCTTATAGTTCG
TTTTTCTCAATCACGGAAGGATCAAGTTTTGCGGCTCAAGCTGAAAATAA
GCACATTCTCTGTCAAAAATAAAATATGATTTTCCAAATTAAACTCTTTC
ATTGAATTGAACAGTTATTAACCAAAGTTTGAGCTGAAAATCGACCATGA
AAGTGCTGTGCTTACAGTTTTGCAAGCCTGGGATTCCCATTTGAAAGACA
CTTGGCCCGTACTGCAACATTATCTGCCTTGTAGGAAATGTTTAAGCTCT
TCACAGTCAACTCTCTGTTATTCGAATCTTTCTGTAATTCGAATTAAAAT
ATTGGTGCCCTCAGCTGGAAATGGTTTGAAATAATGTCTCAATTTGAATC
TTTCCCTGATTCGAATAAAATTTTTGGTCCCTTGAAGATCGAATTAGAAT
GAATCAACTGTATCTCACTATTTACAAGAAATCTCAATTCATAATTCATT
CTCTCGTCTAGGAAGAAATACAGGACAGGCAAAAGACAGACAGGTTTGTC
ATTTCGCTCAGTAGTTATTCATGAAAGTATGAAATTATAGTTGATCGAAG
GTTCCATTATTTTCATAGCTCTAGAAACTATCAGAAAAAGAGATTTTTGA
TTGATTGATCGATCGATCGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGACTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTGACTGATTGGTAGTTC
GACTTATTGATAGTTCGATACATTGATAGTTTGATATATTGATAGTTTGA
TTGATCAATACTTCGATTCATTGATTCTTTGATTCATCGATTCATTGATT
CATTAATGGATAGTAGACTTATTGTTTGATTTAGTGATTATTCGATCAGG
TTAAATTAATGTGTCGATTGATTGTTCGATTATTTGATTTTTATTTTAGT
GCAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGACGTTTT
AAGCGGCAACGGAATCATTGAGAAGAAGCAGAGCATCTTACAACAGAGGC
TCTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGAAAGGTTAAATTTTT
TAATTCACTAAAGTCTGTTTGGATACTTTTGAGGGATCTTGGAGTAAGTT
CAGCACTAAGGTTTGGTTGCTTTGAGACGATAAAGATAAAAATTCCTTAA
CATGAAAGTCACATCGTAGCACCTTAATTTCATTATTTTCGCGTGGTTTA
ATTTTGCGAATCAGCCAAAAAGTCGAAAATGGTCCTGACAACGTCAGTTT
TTCTCACAAACAGCAAATTACAGGGACCTGAACTTCAGTCTCGCATGGAC
TTGGTTTTGCGAGTCAACAATTTCATGCGATTTCACGAGTTTTATTTTCG
TGAATAAAGCAAGAATTCGAGAAACTGTGAAAATTCATCCGAGTTATTAA
GTAGTATTTTTAAGATGTATTTGAAAAACTACTTATTTTTACCCTCTTTT
CTTTAATACTAGACATTTTCGAGTGTGAAAAACTGGAAGAAAAAAGAAAT
GAGCTCAAGGATGATCATGAAAAGCTCAAACAAGAAATTGAAGAACTGAT
GAAAAACAAAGATGGTATAAACATAAATTGCATTCAATATTGTAGTTTTT
CATTATTTGGAATTTTCATAGGCCATTTCACAGTCGCAAAGCGTAATGGG
TAATCAGGACCACTGCGCGATAATGACGACTTACTATTGGTCCAAAGTTT
TGAAAAATATTTTTGCGTCTAGCCAACGGGAAGCCGTTATGGAGGCACAA
CCTGTCCTGATTACCCATGATCTATTTTGACTGTGTTATGGCCTATACTT
CACGTAGGTTTACTAATGCTACCTCAGACTGGGCCTAAATCGGCTAGACT
TGAGGTCGAGAAATTAGCTCTATATTGACCGAATATGTGCCTTAAAAATA
GAAACTTAATGTAAAACAGTGTCAAAGAGTTAAATATTTATCTCTCTTCC
AGCGTCCCCCCCCCCCCCCTTTTCCGGGGGAGCACACCCTTTTTCATCTT
TTTTTTTTTTTTTAAAATGAAAAAAAAAACCGGGCCAAAGAATAAAATTT
TTCCTCTCCTTCCGGCTCCCCCCCCCCCCCCGGGTTTGCCGTGGACACAG
TCCTTTTGACCTCTATATCTTTATTCAGAATGCAAAAAAAAATTGTTGAG
CGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGGTTTTCTCC
GTAAGTTACAAAACAATACGAATCACAGAAGGTAAGAACAGTATACTTTT
TCATATGGCGCCATTACGTTTTGGTTGATGCTTTTAATGCGAATTTCAAG
CTTAATTGTTCTTAAAATATTCTTAACATTCATGATATGCCCAATTTTTA
CATCACTTACAACCGATCAGCTATTGGGTCCGTGATGTAATATCAGAAGA
CATTGCAATGGTGCATATCATGAATAGCTACTTTGTTTATTGACTTAAAA
GGGGCAGAATTAAGAACGACATTACGGTATTTCTAAAACTGAGACTTGGT
TGTTAGCTTTTGGTCAAAATTGATTTGACTAATTTTTGCGGCCGAAAAAA
AAAATCGAAACAAATTGTATTTCGGTAATTAATTTTCGTGGTAATCAGTT
TTCTCGGTTGGGGCTAAATTTTATTAATATTTAAGTGATGTCAGAAAGGC
TTTTGTTAAAATTTGACTCGATCATCTTCTGAAAAAGTAAAATTGTGAAA
TTAACTTTTGCAGTTTCGTTAAATAAACAATTTAAACCGGGATGTTTTCG
TAGATAACATTACGTCATGAATATCATGAATTGACAGATCTTTCCAGAGA
CGTTACTAATTCATTGAATCCTTTTTTTGTCTTTTCAAAGTCTACAAAAC
GAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGAAACA
TAACCTCGAGCGACAACTAGCTGATCAGCAACGTAAACGGAACATTAACA
ATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAATACA
ACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCTTCAGCATCATC
GTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGTCAC
GCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGACGTCAATGTCA
CGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACGATAG
AAACAGTTTTGACTTTGATATTGATGTAAGTTTGTTCTGATTACGTTGTC
TAGCAACGACTTTCATTTTTACGAATGTTGTAATTTTAAGTAAAGTGAAA
CCCTAAGTCACGATCGTGTCGTTATTTGTTTGAGCTAATACAAAGATTTA
GTTACTTTTTTTATTCTGGCAGTTTCATGCCACTTTGGTGGCAATCTTCA
CCTGTCATAACTGGAATGACTGTTGGCCGATCTTTCTGTAAAGGTTTTCC
ATGTTTTTGCAAGTTACGTAATTTTCGCCATTATGGAAGCAATCGTTCAA
ATCTGTGCGGTCCTTTACGCAAGTCGAACGTTTGCTTCCAGAATAACAAA
AATTAAAACATGAAAAAATTTTTATAGTTATTCAAAGTTTTCAACTAATG
CTTTTGGAGAAACAACTTTCAAACTATGATTGCATTTTGTTTTATATATT
TTCAGTTAAGTGATGATGATATGCTGATGACATCATATTTGTTACAAGAA
AAATGATCACTTGGATTCTGGTGTGTGCTAAAACCAGAAACAAGTATAGA
CCAGGCGATGACTCACGGTCGCGCAACCTTTCGATAGAAAAACCCCCATA
TGGTTTTTTGTA

Coding sequence (CDS) from alignment at sc0000222:85703..90314-

>TCONS_00015924 ID=TCONS_00015924|Name=TCONS_00015924|organism=Clytia hemisphaerica|type=CDS|length=8856bp|location=Sequence derived from alignment at sc0000222:85703..90314- (Clytia hemisphaerica)
TTAAGTGATGATGATATGCTGATGACATCATATTTGTTACAAGAAAAATG
ATCTACAAAACGAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACC
GATGAGAAACATAACCTCGAGCGACAACTAGCTGATCAGCAACGTAAACG
GAACATTAACAATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAA
GGCCAAATACAACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCT
TCAGCATCATCGTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAA
AGGGGCGTCACGCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGA
CGTCAATGTCACGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAAC
AGAAACGATAGAAACAGTTTTGACTTTGATATTGATAATGCAAAAAAAAA
TTGTTGAGCGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGG
TTTTCTCCGTAAGTTACAAAACAATACGAATCACAGAAGACATTTTCGAG
TGTGAAAAACTGGAAGAAAAAAGAAATGAGCTCAAGGATGATCATGAAAA
GCTCAAACAAGAAATTGAAGAACTGATGAAAAACAAAGATGTGCAAATTT
CTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGACGTTTTAAGCGGCA
ACGGAATCATTGAGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAAT
TTGAAAATCGAAGAAGACTCTCTGAAGAAAGGAAGAAATACAGGACAGGC
AAAAGACAGACAGTTAATCAAGAAATCCAAAACCACCAAGCTAAAATCAA
ATCCATCAAATATCAGAAAGATTCATTGCTTGGTAAATTGAACAACATGC
GCCACAAATTGCTGGAAGAACAGTTAGAGGAGAAATGGATGAACATTCGA
AAAGATATTTTATTCACACAGAAAGAGAAATGTTTTAATGAGAAACACGA
ACTGGTATTTGAGCTAATGAGTAATGGTCAAGTGATTACTGAACTTTTTG
AACAAATTGTTCACTCTGAAGAAAGAATCAAACAAAGATTTGAAGATCTG
AAGAAAGTTAAGTGATGATGATATGCTGATGACATCATATTTGTTACAAG
AAAAATGATCTACAAAACGAATTGGACAGAAGCAAGAAAAAGCTACAATA
TCTCACCGATGAGAAACATAACCTCGAGCGACAACTAGCTGATCAGCAAC
GTAAACGGAACATTAACAATGTGGAAACCAGACAGTCAAACCCATGGTAC
ATTTCAAGGCCAAATACAACACCTGGTTTCTCTCATCTAAATCACACGAC
GGTTTCTTCAGCATCATCGTCATCTTCGACGCGTCGTTTTCAATATTCCG
TCAACAAAGGGGCGTCACGCAAAAGACCAGCTAATGATGACGTCTTTTCT
GATATGACGTCAATGTCACGTGATAGCTCTCAAAATTCGCAGTACTCGCA
AAACAACAGAAACGATAGAAACAGTTTTGACTTTGATATTGATAATGCAA
AAAAAAATTGTTGAGCGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGA
AGGAAGGTTTTCTCCGTAAGTTACAAAACAATACGAATCACAGAAGACAT
TTTCGAGTGTGAAAAACTGGAAGAAAAAAGAAATGAGCTCAAGGATGATC
ATGAAAAGCTCAAACAAGAAATTGAAGAACTGATGAAAAACAAAGATGTG
CAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGACGTTTTA
AGCGGCAACGGAATCATTGAGAAGAAGCAGAGCATCTTACAACAGAGGCT
CTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGAAAGGAAGAAATACAG
GACAGGCAAAAGACAGACAGTTAATCAAGAAATCCAAAACCACCAAGCTA
AAATCAAATCCATCAAATATCAGAAAGATTCATTGCTTGGTAAATTGAAC
AACATGCGCCACAAATTGCTGGAAGAACAGTTAGAGGAGAAATGGATGAA
CATTCGAAAAGATATTTTATTCACACAGAAAGAGAAATGTTTTAATGAGA
AACACGAACTGGTATTTGAGCTAATGAGTAATGGTCAAGTGATTACTGAA
CTTTTTGAACAAATTGTTCACTCTGAAGAAAGAATCAAACAAAGATTTGA
AGATCTGAAGAAAGTTAAGTGATGATGATATGCTGATGACATCATATTTG
TTACAAGAAAAATGATCTACAAAACGAATTGGACAGAAGCAAGAAAAAGC
TACAATATCTCACCGATGAGAAACATAACCTCGAGCGACAACTAGCTGAT
CAGCAACGTAAACGGAACATTAACAATGTGGAAACCAGACAGTCAAACCC
ATGGTACATTTCAAGGCCAAATACAACACCTGGTTTCTCTCATCTAAATC
ACACGACGGTTTCTTCAGCATCATCGTCATCTTCGACGCGTCGTTTTCAA
TATTCCGTCAACAAAGGGGCGTCACGCAAAAGACCAGCTAATGATGACGT
CTTTTCTGATATGACGTCAATGTCACGTGATAGCTCTCAAAATTCGCAGT
ACTCGCAAAACAACAGAAACGATAGAAACAGTTTTGACTTTGATATTGAT
AATGCAAAAAAAAATTGTTGAGCGCTCAGAGTGATTGTAAAAAGATGAAA
GATGTGAAGGAAGGTTTTCTCCGTAAGTTACAAAACAATACGAATCACAG
AAGACATTTTCGAGTGTGAAAAACTGGAAGAAAAAAGAAATGAGCTCAAG
GATGATCATGAAAAGCTCAAACAAGAAATTGAAGAACTGATGAAAAACAA
AGATGTGCAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGA
CGTTTTAAGCGGCAACGGAATCATTGAGAAGAAGCAGAGCATCTTACAAC
AGAGGCTCTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGAAAGGAAGA
AATACAGGACAGGCAAAAGACAGACAGTTAATCAAGAAATCCAAAACCAC
CAAGCTAAAATCAAATCCATCAAATATCAGAAAGATTCATTGCTTGGTAA
ATTGAACAACATGCGCCACAAATTGCTGGAAGAACAGTTAGAGGAGAAAT
GGATGAACATTCGAAAAGATATTTTATTCACACAGAAAGAGAAATGTTTT
AATGAGAAACACGAACTGGTATTTGAGCTAATGAGTAATGGTCAAGTGAT
TACTGAACTTTTTGAACAAATTGTTCACTCTGAAGAAAGAATCAAACAAA
GATTTGAAGATCTGAAGAAAGTTAAGTGATGATGATATGCTGATGACATC
ATATTTGTTACAAGAAAAATGATCTACAAAACGAATTGGACAGAAGCAAG
AAAAAGCTACAATATCTCACCGATGAGAAACATAACCTCGAGCGACAACT
AGCTGATCAGCAACGTAAACGGAACATTAACAATGTGGAAACCAGACAGT
CAAACCCATGGTACATTTCAAGGCCAAATACAACACCTGGTTTCTCTCAT
CTAAATCACACGACGGTTTCTTCAGCATCATCGTCATCTTCGACGCGTCG
TTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAAAAGACCAGCTAATG
ATGACGTCTTTTCTGATATGACGTCAATGTCACGTGATAGCTCTCAAAAT
TCGCAGTACTCGCAAAACAACAGAAACGATAGAAACAGTTTTGACTTTGA
TATTGATAATGCAAAAAAAAATTGTTGAGCGCTCAGAGTGATTGTAAAAA
GATGAAAGATGTGAAGGAAGGTTTTCTCCGTAAGTTACAAAACAATACGA
ATCACAGAAGACATTTTCGAGTGTGAAAAACTGGAAGAAAAAAGAAATGA
GCTCAAGGATGATCATGAAAAGCTCAAACAAGAAATTGAAGAACTGATGA
AAAACAAAGATGTGCAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAG
ACTTTGACGTTTTAAGCGGCAACGGAATCATTGAGAAGAAGCAGAGCATC
TTACAACAGAGGCTCTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGAA
AGGAAGAAATACAGGACAGGCAAAAGACAGACAGTTAATCAAGAAATCCA
AAACCACCAAGCTAAAATCAAATCCATCAAATATCAGAAAGATTCATTGC
TTGGTAAATTGAACAACATGCGCCACAAATTGCTGGAAGAACAGTTAGAG
GAGAAATGGATGAACATTCGAAAAGATATTTTATTCACACAGAAAGAGAA
ATGTTTTAATGAGAAACACGAACTGGTATTTGAGCTAATGAGTAATGGTC
AAGTGATTACTGAACTTTTTGAACAAATTGTTCACTCTGAAGAAAGAATC
AAACAAAGATTTGAAGATCTGAAGAAAGTTAAGTGATGATGATATGCTGA
TGACATCATATTTGTTACAAGAAAAATGATCTACAAAACGAATTGGACAG
AAGCAAGAAAAAGCTACAATATCTCACCGATGAGAAACATAACCTCGAGC
GACAACTAGCTGATCAGCAACGTAAACGGAACATTAACAATGTGGAAACC
AGACAGTCAAACCCATGGTACATTTCAAGGCCAAATACAACACCTGGTTT
CTCTCATCTAAATCACACGACGGTTTCTTCAGCATCATCGTCATCTTCGA
CGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAAAAGACCA
GCTAATGATGACGTCTTTTCTGATATGACGTCAATGTCACGTGATAGCTC
TCAAAATTCGCAGTACTCGCAAAACAACAGAAACGATAGAAACAGTTTTG
ACTTTGATATTGATAATGCAAAAAAAAATTGTTGAGCGCTCAGAGTGATT
GTAAAAAGATGAAAGATGTGAAGGAAGGTTTTCTCCGTAAGTTACAAAAC
AATACGAATCACAGAAGACATTTTCGAGTGTGAAAAACTGGAAGAAAAAA
GAAATGAGCTCAAGGATGATCATGAAAAGCTCAAACAAGAAATTGAAGAA
CTGATGAAAAACAAAGATGTGCAAATTTCTTGGAAGCATGTGATTGTTTC
CTTGAAGACTTTGACGTTTTAAGCGGCAACGGAATCATTGAGAAGAAGCA
GAGCATCTTACAACAGAGGCTCTCTAATTTGAAAATCGAAGAAGACTCTC
TGAAGAAAGGAAGAAATACAGGACAGGCAAAAGACAGACAGTTAATCAAG
AAATCCAAAACCACCAAGCTAAAATCAAATCCATCAAATATCAGAAAGAT
TCATTGCTTGGTAAATTGAACAACATGCGCCACAAATTGCTGGAAGAACA
GTTAGAGGAGAAATGGATGAACATTCGAAAAGATATTTTATTCACACAGA
AAGAGAAATGTTTTAATGAGAAACACGAACTGGTATTTGAGCTAATGAGT
AATGGTCAAGTGATTACTGAACTTTTTGAACAAATTGTTCACTCTGAAGA
AAGAATCAAACAAAGATTTGAAGATCTGAAGAAAGTTAAGTGATGATGAT
ATGCTGATGACATCATATTTGTTACAAGAAAAATGATCTACAAAACGAAT
TGGACAGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGAAACATAAC
CTCGAGCGACAACTAGCTGATCAGCAACGTAAACGGAACATTAACAATGT
GGAAACCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAATACAACAC
CTGGTTTCTCTCATCTAAATCACACGACGGTTTCTTCAGCATCATCGTCA
TCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAA
AAGACCAGCTAATGATGACGTCTTTTCTGATATGACGTCAATGTCACGTG
ATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACGATAGAAAC
AGTTTTGACTTTGATATTGATAATGCAAAAAAAAATTGTTGAGCGCTCAG
AGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGGTTTTCTCCGTAAGTT
ACAAAACAATACGAATCACAGAAGACATTTTCGAGTGTGAAAAACTGGAA
GAAAAAAGAAATGAGCTCAAGGATGATCATGAAAAGCTCAAACAAGAAAT
TGAAGAACTGATGAAAAACAAAGATGTGCAAATTTCTTGGAAGCATGTGA
TTGTTTCCTTGAAGACTTTGACGTTTTAAGCGGCAACGGAATCATTGAGA
AGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATTTGAAAATCGAAGAA
GACTCTCTGAAGAAAGGAAGAAATACAGGACAGGCAAAAGACAGACAGTT
AATCAAGAAATCCAAAACCACCAAGCTAAAATCAAATCCATCAAATATCA
GAAAGATTCATTGCTTGGTAAATTGAACAACATGCGCCACAAATTGCTGG
AAGAACAGTTAGAGGAGAAATGGATGAACATTCGAAAAGATATTTTATTC
ACACAGAAAGAGAAATGTTTTAATGAGAAACACGAACTGGTATTTGAGCT
AATGAGTAATGGTCAAGTGATTACTGAACTTTTTGAACAAATTGTTCACT
CTGAAGAAAGAATCAAACAAAGATTTGAAGATCTGAAGAAAGTTAAGTGA
TGATGATATGCTGATGACATCATATTTGTTACAAGAAAAATGATCTACAA
AACGAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGAA
ACATAACCTCGAGCGACAACTAGCTGATCAGCAACGTAAACGGAACATTA
ACAATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAAT
ACAACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCTTCAGCATC
ATCGTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGT
CACGCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGACGTCAATG
TCACGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACGA
TAGAAACAGTTTTGACTTTGATATTGATAATGCAAAAAAAAATTGTTGAG
CGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGGTTTTCTCC
GTAAGTTACAAAACAATACGAATCACAGAAGACATTTTCGAGTGTGAAAA
ACTGGAAGAAAAAAGAAATGAGCTCAAGGATGATCATGAAAAGCTCAAAC
AAGAAATTGAAGAACTGATGAAAAACAAAGATGTGCAAATTTCTTGGAAG
CATGTGATTGTTTCCTTGAAGACTTTGACGTTTTAAGCGGCAACGGAATC
ATTGAGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATTTGAAAAT
CGAAGAAGACTCTCTGAAGAAAGGAAGAAATACAGGACAGGCAAAAGACA
GACAGTTAATCAAGAAATCCAAAACCACCAAGCTAAAATCAAATCCATCA
AATATCAGAAAGATTCATTGCTTGGTAAATTGAACAACATGCGCCACAAA
TTGCTGGAAGAACAGTTAGAGGAGAAATGGATGAACATTCGAAAAGATAT
TTTATTCACACAGAAAGAGAAATGTTTTAATGAGAAACACGAACTGGTAT
TTGAGCTAATGAGTAATGGTCAAGTGATTACTGAACTTTTTGAACAAATT
GTTCACTCTGAAGAAAGAATCAAACAAAGATTTGAAGATCTGAAGAAAGT
TAAGTGATGATGATATGCTGATGACATCATATTTGTTACAAGAAAAATGA
TCTACAAAACGAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACCG
ATGAGAAACATAACCTCGAGCGACAACTAGCTGATCAGCAACGTAAACGG
AACATTAACAATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAAG
GCCAAATACAACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCTT
CAGCATCATCGTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAA
GGGGCGTCACGCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGAC
GTCAATGTCACGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACA
GAAACGATAGAAACAGTTTTGACTTTGATATTGATAATGCAAAAAAAAAT
TGTTGAGCGCTCAGAGTGATTGTAAAAAGATGAAAGATGTGAAGGAAGGT
TTTCTCCGTAAGTTACAAAACAATACGAATCACAGAAGACATTTTCGAGT
GTGAAAAACTGGAAGAAAAAAGAAATGAGCTCAAGGATGATCATGAAAAG
CTCAAACAAGAAATTGAAGAACTGATGAAAAACAAAGATGTGCAAATTTC
TTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGACGTTTTAAGCGGCAA
CGGAATCATTGAGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATT
TGAAAATCGAAGAAGACTCTCTGAAGAAAGGAAGAAATACAGGACAGGCA
AAAGACAGACAGTTAATCAAGAAATCCAAAACCACCAAGCTAAAATCAAA
TCCATCAAATATCAGAAAGATTCATTGCTTGGTAAATTGAACAACATGCG
CCACAAATTGCTGGAAGAACAGTTAGAGGAGAAATGGATGAACATTCGAA
AAGATATTTTATTCACACAGAAAGAGAAATGTTTTAATGAGAAACACGAA
CTGGTATTTGAGCTAATGAGTAATGGTCAAGTGATTACTGAACTTTTTGA
ACAAATTGTTCACTCTGAAGAAAGAATCAAACAAAGATTTGAAGATCTGA
AGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008892XLOC_008892Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015924-exon-sc0000222-1575043694:90164..90314TCONS_00015924-exon-sc0000222-1575043694:90164..90314Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:89729..89931TCONS_00015924-exon-sc0000222-1575043694:89729..89931Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:89172..89203TCONS_00015924-exon-sc0000222-1575043694:89172..89203Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:88476..88615TCONS_00015924-exon-sc0000222-1575043694:88476..88615Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:87951..88052TCONS_00015924-exon-sc0000222-1575043694:87951..88052Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:87284..87386TCONS_00015924-exon-sc0000222-1575043694:87284..87386Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:86290..86674TCONS_00015924-exon-sc0000222-1575043694:86290..86674Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1575043694:85703..85859TCONS_00015924-exon-sc0000222-1575043694:85703..85859Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:90164..90314TCONS_00015924-exon-sc0000222-1510915933:90164..90314Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:89729..89931TCONS_00015924-exon-sc0000222-1510915933:89729..89931Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:89172..89203TCONS_00015924-exon-sc0000222-1510915933:89172..89203Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:88476..88615TCONS_00015924-exon-sc0000222-1510915933:88476..88615Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:87951..88052TCONS_00015924-exon-sc0000222-1510915933:87951..88052Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:87284..87386TCONS_00015924-exon-sc0000222-1510915933:87284..87386Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:86290..86674TCONS_00015924-exon-sc0000222-1510915933:86290..86674Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1510915933:85703..85859TCONS_00015924-exon-sc0000222-1510915933:85703..85859Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:90164..90314TCONS_00015924-exon-sc0000222-1491911889:90164..90314Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:89729..89931TCONS_00015924-exon-sc0000222-1491911889:89729..89931Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:89172..89203TCONS_00015924-exon-sc0000222-1491911889:89172..89203Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:88476..88615TCONS_00015924-exon-sc0000222-1491911889:88476..88615Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:87951..88052TCONS_00015924-exon-sc0000222-1491911889:87951..88052Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:87284..87386TCONS_00015924-exon-sc0000222-1491911889:87284..87386Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:86290..86674TCONS_00015924-exon-sc0000222-1491911889:86290..86674Clytia hemisphaericaexon
TCONS_00015924-exon-sc0000222-1491911889:85703..85859TCONS_00015924-exon-sc0000222-1491911889:85703..85859Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015924-proteinTCONS_00015924-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000222supercontigsc0000222:85703..90314 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.8347	11.2473	17.3539	14.4419	2.83285	2.03397	1.40035	2.44812	0.754658	0.783692	0	0.710616	0.134112	0	0.521245	0.280768	0.575714	0.593245	0	0.370908	1.19609	0.754794	5.28811	4.90621	20.4639	20.576	0.63178	2.69701	4.5549	2.548
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015924 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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