TCONS_00015873 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015873
Unique NameTCONS_00015873
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015873 ID=TCONS_00015873|Name=TCONS_00015873|organism=Clytia hemisphaerica|type=transcript|length=314bp
aatataaatagtcATCAGAAGTGCtatcctggcatgaatccgtgacgcag
tggataaggcaatgggttacaaaacatcggaactttgcatttggtgggtt
cgaatcccaccggtggcgatcagtcggtaagtcattcagtaagttagaaa
acatagaaaataactttaCATCTAGCTGTAAAGCTGTGACATCAGGTGTT
CCACAAGGTACTGTTCTGGGCCCACTGCTTTTCTTAGTATACATCAACGA
TATGCCCCATGTAACAAGCTCTAAACTTGCACTTTTTGCAGATGATTCTT
ATCTGTATCGCCCA
Run BLAST on NCBI

transcript from alignment at sc0000217:3651..3964

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015873 ID=TCONS_00015873|Name=TCONS_00015873|organism=Clytia hemisphaerica|type=transcript|length=314bp|location=Sequence derived from alignment at sc0000217:3651..3964 (Clytia hemisphaerica)
TGGGCGATACAGATAAGAATCATCTGCAAAAAGTGCAAGTTTAGAGCTTG
TTACATGGGGCATATCGTTGATGTATACTAAGAAAAGCAGTGGGCCCAGA
ACAGTACCTTGTGGAACACCTGATGTCACAGCTTTACAGCTAGATGtaaa
gttattttctatgttttctaacttactgaatgacttaccgactgatcgcc
accggtgggattcgaacccaccaaatgcaaagttccgatgttttgtaacc
cattgccttatccactgcgtcacggattcatgccaggataGCACTTCTGA
Tgactatttatatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008863XLOC_008863Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015873-exon-sc0000217-1491911889:3651..3964TCONS_00015873-exon-sc0000217-1491911889:3651..3964Clytia hemisphaericaexon
TCONS_00015873-exon-sc0000217-1510915933:3651..3964TCONS_00015873-exon-sc0000217-1510915933:3651..3964Clytia hemisphaericaexon
TCONS_00015873-exon-sc0000217-1575043694:3651..3964TCONS_00015873-exon-sc0000217-1575043694:3651..3964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000217supercontigsc0000217:3651..3964 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.675588	1.26106	4.54138	2.45416	1.59228	1.98119	4.34288	2.84602	1.99257	4.58365	5.80466	1.72	1.57259	0.466615	0.590866	1.78533	0	2.0793	1.79541	0	0.653197	1.96256	0.387308	0.352119	5.22498	3.76258	0.637789	2.2711	0.578924	0.591991
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015873 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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