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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015814 ID=TCONS_00015814|Name=TCONS_00015814|organism=Clytia hemisphaerica|type=transcript|length=601bp
GTAACGACCAAATTTCAAATCGataattataatttttcttaaattctaCT
GACTCGACCGTTTCGTTACGAATAAATAACAATACCCCTTTTGTATTTTA
ATATAATAAACGCTGTGTTAATACGCTGTGAGGATAAATATTATGGCTGT
GGAATAGTTTTGATCATTCTGAAATTGTCTTCGAGAAGAACAGTTGGATC
ACGAAACAGCAAGCATGAAGTCAGCAACAATCATAATTTTCGCCACCATT
TTGGCTATGTGTTTGGTCGCCGAGGGCAACCTAATGAAGGATGAAAGTGA
ACGCCTTCTGAGAATGAACTTTGAGGATGAATTTGACGGAGGAATTTACG
CGGAGCCGATTTACGAGGATGTTGAAAATGACGAAGATTCGGAcgaaaaa
ccaaagaaaatttgTATCGCTCACTGCAACGGATGGATTTTCGGATGAAT
CAACCAATCACTTTAGTCTTTCAAATCACATCATCAAGAACACTTTAGTA
ATTcataatatattttctttttgtagaATATATTCACCATTATGGGAATA
AGTTCATGTTATAAATGTTTCTTCTGTTCCATATAAATGTACAAGTTCCA
C Run BLAST on NCBI transcript from alignment at sc0000217:374725..376013+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015814 ID=TCONS_00015814|Name=TCONS_00015814|organism=Clytia hemisphaerica|type=transcript|length=1289bp|location=Sequence derived from alignment at sc0000217:374725..376013+ (Clytia hemisphaerica)
GTAACGACCAAATTTCAAATCGataattataatttttcttaaattctaCT
GACTCGACCGTTTCGTTACGAATAAATAACAATACCCCTTTTGTATTTTA
ATATAATAAACGCTGTGTTAATACGCTGTGAGGATAAATATTATGGCTGT
GGAATAGTTTTGATCATTCTGAAATTGTCTTCGAGAAGAACAGTTGGATC
ACGAAACAGCAAGGTCAGTTTatgtaactttttttttgtgAGTTTGAAGT
AACAAAAAAGGGAGTGGTGatacccaatgaagtataagcccaaaaggcta
gaagcgaatctctaacctttctcaggcaagaaaaaaccttaaaatatgcg
ccatATTTTTTACGActgattgaatctagcaattcctttgttttcgagtg
atattttttttgaaatttagccgtaagttttagtttcaatctatcatttg
tgtaaaaacaagGCGGGCCACTCAAGGCCGCGCAAATTTGGTAGGatttt
gttggcttcaaatcctaccaaggagattcgattctagcccttcgggctta
tacttcattggtgaTACCTAAGACACTCGACCGTGAAAAACTCGAGACCC
CTGGTAAATACATTAACAAGATCCCTTTAAACGAATTGGTGCTTTTAGTT
AATTCTCATTACCAAAATGATGAGTTGATGAGAATCTTATTATTATAACG
TTATACTTTCAATAAAGGGTTGACAGATATCTCTCACATTTTTAGCATGA
AGTCAGCAACAATCATAATTTTCGCCACCATTTTGGCTATGTGTTTGGTC
GCCGAGGGCAACCTAATGAAGGATGAAAGTGAACGCCTTCTGAGAATGAA
CTTTGAGGATGAATTTGACGGAGGAATTTACGCGGAGCCGATTTACGAGG
ATGTTGAAAATGACGAAGATTCGGAcgaaaaaccaaagaaaatttggtgA
GTTTTTCATAAAACGTACAACAAAAGCAACCATTTTTGTCTGTAAAACAA
TAGCCTGCCGAGGATGCATGTGCCCAAATTTAACTAGTTCCTATAAAAAG
GGTTTATAATATTCcttaatattcaaaatatttttctcctttttgtttTT
AGTATCGCTCACTGCAACGGATGGATTTTCGGATGAATCAACCAATCACT
TTAGTCTTTCAAATCACATCATCAAGAACACTTTAGTAATTcataatata
ttttctttttgtagaATATATTCACCATTATGGGAATAAGTTCATGTTAT
AAATGTTTCTTCTGTTCCATATAAATGTACAAGTTCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015814-exon-sc0000217-1491911889:374725..374937 | TCONS_00015814-exon-sc0000217-1491911889:374725..374937 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1510915933:374725..374937 | TCONS_00015814-exon-sc0000217-1510915933:374725..374937 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1575043694:374725..374937 | TCONS_00015814-exon-sc0000217-1575043694:374725..374937 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1491911889:375470..375670 | TCONS_00015814-exon-sc0000217-1491911889:375470..375670 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1510915933:375470..375670 | TCONS_00015814-exon-sc0000217-1510915933:375470..375670 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1575043694:375470..375670 | TCONS_00015814-exon-sc0000217-1575043694:375470..375670 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1491911889:375827..376013 | TCONS_00015814-exon-sc0000217-1491911889:375827..376013 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1510915933:375827..376013 | TCONS_00015814-exon-sc0000217-1510915933:375827..376013 | Clytia hemisphaerica | exon |
| TCONS_00015814-exon-sc0000217-1575043694:375827..376013 | TCONS_00015814-exon-sc0000217-1575043694:375827..376013 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000217 | supercontig | sc0000217:374725..376013 + |
Blast
The following BLAST results are available for this feature:
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