TCONS_00015781 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015781
Unique NameTCONS_00015781
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length209

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015781 ID=TCONS_00015781|Name=TCONS_00015781|organism=Clytia hemisphaerica|type=transcript|length=209bp
ccCTTACCAAGATAATCTAATttccattgatttcaaattaaatgaaaaac
taaaaataatgctAAACTGTATATATTCCAAGGAGGAAACTTGGATAAAA
ATACATGAAGCACAAGCAAAACCAAGTTTACATCAAATTCATTTGATAAT
TGTTCAAAAGTCAGCTTCCACTATATAGCTATAAAAATTGGTATGCAGCA
ATCATTTGA
Run BLAST on NCBI

transcript from alignment at sc0000216:177117..177325

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015781 ID=TCONS_00015781|Name=TCONS_00015781|organism=Clytia hemisphaerica|type=transcript|length=209bp|location=Sequence derived from alignment at sc0000216:177117..177325 (Clytia hemisphaerica)
TCAAATGATTGCTGCATACCAATTTTTATAGCTATATAGTGGAAGCTGAC
TTTTGAACAATTATCAAATGAATTTGATGTAAACTTGGTTTTGCTTGTGC
TTCATGTATTTTTATCCAAGTTTCCTCCTTGGAATATATACAGTTTagca
ttatttttagtttttcatttaatttgaaatcaatggaaATTAGATTATCT
TGGTAAGgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008817XLOC_008817Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015781-exon-sc0000216-1491911889:177117..177325TCONS_00015781-exon-sc0000216-1491911889:177117..177325Clytia hemisphaericaexon
TCONS_00015781-exon-sc0000216-1510915933:177117..177325TCONS_00015781-exon-sc0000216-1510915933:177117..177325Clytia hemisphaericaexon
TCONS_00015781-exon-sc0000216-1575043694:177117..177325TCONS_00015781-exon-sc0000216-1575043694:177117..177325Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216supercontigsc0000216:177117..177325 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015781 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top