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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015750 ID=TCONS_00015750|Name=TCONS_00015750|organism=Clytia hemisphaerica|type=transcript|length=915bp
GTGAAGGACGATGGTTCGGGAGATTCTTGTCTCGGAAATTTGACTTTaga
actgaatttttttaattcattataCCTGCCAAGATGTTAACATGACCAAA
CCAACGAAAGGAAAGACACGTGGTAGAGGATCACAATGTGCTGTCTGGAT
GTTATGGTATGAATCTTTGTTTCATTCATCCGTGATGAGCGAATCAAATA
TTGGTTTTGGATGTCACGGATCTATACCGTTCTTTCTGACCACGTCTAGT
CAGAGATTACTATTAACATCGTCGAACTCACCACCAGCATACAGGACCGA
GCCTTAACACTTTGGTATTGACTGCAATACCCTTGCCTCACCACGGATTG
CGCTATAGAGAAAATGTCATATAGAACTTTGAAAATCGCTGCAGATTACA
ATACGATATAAGAAATCTGTTCAAACGACGGCGAAATTTAAAGATCCTGG
AAGCacttttttcgtgattttttagACTTCAAAGCAAAACGTACAACCTT
GGAATCTCTTCTATGGTCTTTTGGAAAACATGGTGCGGATTAGCTCTGTA
TAACAGAAAGAATGTAGAGCTCAGTTAACCATGGTTGATGTTGATGCAGA
TGATCGTCACTGAAGATTGATGCAGGATACGACAATGACGTCACAAtact
tgtgttttttttttacttaaaaggAAACAAATAAAACTCtccgtcataaa
ttttgaatcCCCTCAGATCCGCCACTGCACTTACTTCTATAGCTTTTTTA
GACCactttcaagaaatatttaatattaGCCCCATTCAGTTTTCAATCTC
TATGAATAAATTTCTCAAAGGGGTTGAAATTTAGGGTATTTTCTAAAACG
GACAAAGTTTTAGCCAATTGGGTCTGTGAGACAAGGGTGTATTGCCGTGA
TCATAGTAAGCCGTG Run BLAST on NCBI transcript from alignment at sc0000216:298724..301207+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015750 ID=TCONS_00015750|Name=TCONS_00015750|organism=Clytia hemisphaerica|type=transcript|length=2484bp|location=Sequence derived from alignment at sc0000216:298724..301207+ (Clytia hemisphaerica)
GTGAAGGACGATGGTTCGGGAGATTCTTGTCTCGGAAATTTGACTTTaga
actgaatttttttaattcattataCCTGCCAAGATGTTAACATGACCAAA
CCAACGAAAGGAAAGACACGTGGTAGAGGATCACAATGTGCTGTCTGGAT
GTTATGGTATGAATCTTTGGTATGTTTCGATCTAGTGGTTTTGCAGTTTT
GAGAAAGTTTAAAAGgcaatttgaatgtttttaagCTATAGATTTTCCTC
TCAGCCTCTATTTAAGAGAtcgttttttctcaaaacaagGCAATCTTCAA
CTTTAATCTCAGTGTTTTGATTTTCGGTCTTGAATCTTGTTGTTTACTTG
AGAAATCATGTCTTTCTCATACATTAAGAAAAATTGTCTCGTGAAACACT
TATTTTTGACGTTTCTTTAGGAAATTTGAATTGCTTTGTTTGCGGCAGTT
TTCGAAAGAGTACTCAATTAATTCTCTGTCAGGTAGTAAAAAACGAAATT
AGCTTTTAATGGCAAGAGAGAGGGTGCGAAATGATATTTACTTTGGTGCT
CACATACATCAATTGAGTATTTTGTGAAGCTAGATTTTTTTGTACCGTTA
ATGTTGGTTTGAGAATGTGCAATTTAAGGATTATACGTTTCTGTGTGTTT
TGAggttaatattttttttgttgaccTTGAAAATACAAACCTAATTGTTC
CTGATTAACATTACACACAAATGAAACCCATATTATAGGGATTAAAGTAA
TTAACGATGAAAATAGTTTTGTCACTTGGAAAACAATatcttttgtttca
aattttattgcaacactctttgaaagaaaatttattgcTGAACAGTGACA
TCCAGTAACAGTTGTATTGCATTTCTGTTTTTATTTCACATTCTCAAAAA
AAGCAACAGTTAACTGAAAAGATAGTATCTTGGAAATAAGAATGTCTGGT
CGGGTTTTAGAATCTATAGTTTTGGTTCTGATTTTTCATGAATTCTTGTT
TGTAGGTTTTCTTGAAATGTCAATTTAAGGTTTGTACATATGGTGTAAAC
AATCCAGCATCATTATTTGTCAAATTGTTCGAGATTTGTAAGGATTATTG
TGCGTTTAACTTGTTGCGTTAACGTTTCATGTGTgtaatgaattttcaaa
ttcattatTATCTACTatgttctttataagaatacccaTAATAAGTTTTT
gaggccttcggatgttcttaacgtttagattttcaaccctgaaatgttct
caacatgGTCTTATTTTCACCGATGTGGGAGTATTTTTGTACATGTTCCC
AAGATATATTTTAGATTCCGCAaggccttaaattgttcttaatactCTGT
ATGGCTTTTGAAAGTCGAAAACTTTTTCGAAATGGGGTGCTTAGACAGTT
TATCTTATACCTTTTCTTATAGATCTTTAATCTTTGTTTTCAGTTTCATT
CATCCGTGATGAGCGAATCAAATATTGGTTTTGGATGTCACGGATCTATA
CCGTTCTTTCTGACCACGTCTAGTCAGAGATTACTATTAACATCGTCGAA
CTCACCACCAGCATACAGGACCGAGCCTTAACACTTTGGTATTGACTGCA
ATACCCTTGCCTCACCACGGATTGCGCTATAGAGAAAATGTCATATAGAA
CTTTGAAAATCGCTGCAGATTACAATACGATATAAGTTTGTATACCCCCT
GgatttattcattttttggGACCCATTAATAATATTCTGATGGATGTTTG
GTCAATTCGCTGCCAAAATAGTGTACTGTTACTAAGTTAATATATAGATA
TTTATCATGTTAATCGAGACGGCAGTTCTCCTGCTTTATGCTTTTTACGT
AGATTTTGTTATTAAGTCGTCATTGTAAACTTCGTcagctatatcattgt
tttaaagttttaaaggttGCTCAGCTTGATCGTCCATgattattatttta
aaaacagattttttctctcgcttTTTTCAGGAAATCTGTTCAAACGACGG
CGAAATTTAAAGATCCTGGAAGCacttttttcgtgattttttagACTTCA
AAGCAAAACGTACAACCTTGGAATCTCTTCTATGGTCTTTTGGAAAACAT
GGTGCGGATTAGCTCTGTATAACAGAAAGAATGTAGAGCTCAGTTAACCA
TGGTTGATGTTGATGCAGATGATCGTCACTGAAGATTGATGCAGGATACG
ACAATGACGTCACAAtacttgtgttttttttttacttaaaaggAAACAAA
TAAAACTCtccgtcataaattttgaatcCCCTCAGATCCGCCACTGCACT
TACTTCTATAGCTTTTTTAGACCactttcaagaaatatttaatattaGCC
CCATTCAGTTTTCAATCTCTATGAATAAATTTCTCAAAGGGGTTGAAATT
TAGGGTATTTTCTAAAACGGACAAAGTTTTAGCCAATTGGGTCTGTGAGA
CAAGGGTGTATTGCCGTGATCATAGTAAGCCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015750-exon-sc0000216-1491911889:298724..298892 | TCONS_00015750-exon-sc0000216-1491911889:298724..298892 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1510915933:298724..298892 | TCONS_00015750-exon-sc0000216-1510915933:298724..298892 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1575043694:298724..298892 | TCONS_00015750-exon-sc0000216-1575043694:298724..298892 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1491911889:300167..300408 | TCONS_00015750-exon-sc0000216-1491911889:300167..300408 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1510915933:300167..300408 | TCONS_00015750-exon-sc0000216-1510915933:300167..300408 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1575043694:300167..300408 | TCONS_00015750-exon-sc0000216-1575043694:300167..300408 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1491911889:300704..301207 | TCONS_00015750-exon-sc0000216-1491911889:300704..301207 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1510915933:300704..301207 | TCONS_00015750-exon-sc0000216-1510915933:300704..301207 | Clytia hemisphaerica | exon |
| TCONS_00015750-exon-sc0000216-1575043694:300704..301207 | TCONS_00015750-exon-sc0000216-1575043694:300704..301207 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216 | supercontig | sc0000216:298724..301207 + |
Blast
The following BLAST results are available for this feature:
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