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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015641 ID=TCONS_00015641|Name=TCONS_00015641|organism=Clytia hemisphaerica|type=transcript|length=796bp
CTTCTGCTCTTTGATTTTGGAgttctttaacttttttatcaaCTTCTTTC
ATCACTGTTAATAACAtatctttgttttgcttgctCATTTCATCTTGTAC
AGTTTTCTTTAAGTCTTCAACCAAGTCTGTCATATGATCTTTTCCATCCT
TAATATCAACAACGACTTTGTCATGCAGCAAACTATCAAAATCTGGCAAA
CAGTTGTAATTGATTCCAACCAAAGCTGCTCTTATTTCTGCCCAAATTCC
TTTAAAGAAGTTCTgatctttaaattcttttaAAGCACCGTGAAGAATTT
TATTTCGAAGTTGTCGTAAAGCAATGATAAATGCTGCAACGGAAAAATCG
CCTTGTTTCGGTTCTTTGATTCTCCAACCACCTTTGGGCGGTGTAATATT
CACAAAGTTGATGATGACAAAGACGATCAAGGTAATGTCAAATGAGAGTG
AAGAGGTTTTTCCGTTGGCTGGAAGCAAAAGGTCAAATTGATCTTTCTTC
AAAGCTCCACTTTTTTTCAGTCCGTTCAATTTCTTTCTATATTTATCGAA
GAATTGATATAACTGCTGCTCGTTGCGGGGAAGACCCTGATATAAAGGGT
CGTTCGTGTCGTTGTGCATGACACGGAGAAGTCCATTCTTGCCGTGAATG
TTGAGAGCCAAAATGCACTTTGCCCATTCTTTGTTGTTGGTTATTGTTTT
GGAAAAATCGCTACCCATCTTTATGATACAATGAATGAAAACATAAAGCG
TTCACTGATGGATTTTTGgtccaatatttttttattgatctgttag Run BLAST on NCBI protein sequence of TCONS_00015641-protein >TCONS_00015641-protein ID=TCONS_00015641-protein|Name=TCONS_00015641-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MGSDFSKTITNNKEWAKCILALNIHGKNGLLRVMHNDTNDPLYQGLPRNE
QQLYQFFDKYRKKLNGLKKSGALKKDQFDLLLPANGKTSSLSFDITLIVF
VIINFVNITPPKGGWRIKEPKQGDFSVAAFIIALRQLRNKILHGALKEFK
DQNFFKGIWAEIRAALVGINYNCLPDFDSLLHDKVVVDIKDGKDHMTDLV
EDLKKTVQDEMSKQNKDMLLTVMKEVDKKVKELQNQRAE Run BLAST on NCBI transcript from alignment at sc0000214:212883..213678 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015641 ID=TCONS_00015641|Name=TCONS_00015641|organism=Clytia hemisphaerica|type=transcript|length=796bp|location=Sequence derived from alignment at sc0000214:212883..213678 (Clytia hemisphaerica)
ctaacagatcaataaaaaaatattggacCAAAAATCCATCAGTGAACGCT
TTATGTTTTCATTCATTGTATCATAAAGATGGGTAGCGATTTTTCCAAAA
CAATAACCAACAACAAAGAATGGGCAAAGTGCATTTTGGCTCTCAACATT
CACGGCAAGAATGGACTTCTCCGTGTCATGCACAACGACACGAACGACCC
TTTATATCAGGGTCTTCCCCGCAACGAGCAGCAGTTATATCAATTCTTCG
ATAAATATAGAAAGAAATTGAACGGACTGAAAAAAAGTGGAGCTTTGAAG
AAAGATCAATTTGACCTTTTGCTTCCAGCCAACGGAAAAACCTCTTCACT
CTCATTTGACATTACCTTGATCGTCTTTGTCATCATCAACTTTGTGAATA
TTACACCGCCCAAAGGTGGTTGGAGAATCAAAGAACCGAAACAAGGCGAT
TTTTCCGTTGCAGCATTTATCATTGCTTTACGACAACTTCGAAATAAAAT
TCTTCACGGTGCTTtaaaagaatttaaagatcAGAACTTCTTTAAAGGAA
TTTGGGCAGAAATAAGAGCAGCTTTGGTTGGAATCAATTACAACTGTTTG
CCAGATTTTGATAGTTTGCTGCATGACAAAGTCGTTGTTGATATTAAGGA
TGGAAAAGATCATATGACAGACTTGGTTGAAGACTTAAAGAAAACTGTAC
AAGATGAAATGagcaagcaaaacaaagataTGTTATTAACAGTGATGAAA
GAAGttgataaaaaagttaaagaacTCCAAAATCAAAGAGCAGAAG Coding sequence (CDS) from alignment at sc0000214:212883..213678 >TCONS_00015641 ID=TCONS_00015641|Name=TCONS_00015641|organism=Clytia hemisphaerica|type=CDS|length=717bp|location=Sequence derived from alignment at sc0000214:212883..213678 (Clytia hemisphaerica)
ATGGGTAGCGATTTTTCCAAAACAATAACCAACAACAAAGAATGGGCAAA
GTGCATTTTGGCTCTCAACATTCACGGCAAGAATGGACTTCTCCGTGTCA
TGCACAACGACACGAACGACCCTTTATATCAGGGTCTTCCCCGCAACGAG
CAGCAGTTATATCAATTCTTCGATAAATATAGAAAGAAATTGAACGGACT
GAAAAAAAGTGGAGCTTTGAAGAAAGATCAATTTGACCTTTTGCTTCCAG
CCAACGGAAAAACCTCTTCACTCTCATTTGACATTACCTTGATCGTCTTT
GTCATCATCAACTTTGTGAATATTACACCGCCCAAAGGTGGTTGGAGAAT
CAAAGAACCGAAACAAGGCGATTTTTCCGTTGCAGCATTTATCATTGCTT
TACGACAACTTCGAAATAAAATTCTTCACGGTGCTTtaaaagaatttaaa
gatcAGAACTTCTTTAAAGGAATTTGGGCAGAAATAAGAGCAGCTTTGGT
TGGAATCAATTACAACTGTTTGCCAGATTTTGATAGTTTGCTGCATGACA
AAGTCGTTGTTGATATTAAGGATGGAAAAGATCATATGACAGACTTGGTT
GAAGACTTAAAGAAAACTGTACAAGATGAAATGagcaagcaaaacaaaga
taTGTTATTAACAGTGATGAAAGAAGttgataaaaaagttaaagaacTCC
AAAATCAAAGAGCAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015641-exon-sc0000214-1491911889:212883..213678 | TCONS_00015641-exon-sc0000214-1491911889:212883..213678 | Clytia hemisphaerica | exon |
| TCONS_00015641-exon-sc0000214-1510915933:212883..213678 | TCONS_00015641-exon-sc0000214-1510915933:212883..213678 | Clytia hemisphaerica | exon |
| TCONS_00015641-exon-sc0000214-1575043694:212883..213678 | TCONS_00015641-exon-sc0000214-1575043694:212883..213678 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000214 | supercontig | sc0000214:212883..213678 . |
Blast
The following BLAST results are available for this feature:
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