TCONS_00015631 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015631
Unique NameTCONS_00015631
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1727

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015631 ID=TCONS_00015631|Name=TCONS_00015631|organism=Clytia hemisphaerica|type=transcript|length=1727bp
CTATCGTCCTCGCCAGATATATTGAATTGGACGAGGGGCTGGTTGGCGTC
AGTTTGACGTACGTGCTCTTATTAAGTGGAATGTTCCAATGGTGCGTTCA
ACAGAGCGCGCAAGTCGATAACCTGATGACCTCGGTACAACGTGCTTTTC
AATACGCTGACCTACATCCAGAACGGGATGAGGGTACGGATAAAGATTTA
CGAGACACGTGGCCGGAATATGGTTTGTTGACATTCGAAAGCGCTTCCTT
TTCATATCACAAATCGCTACCGTacgttttgaaaaagattttcacgGCTG
TGCGTCCATATgaaaagctTGGCATTGTTGGCAGAACAGGTTCCGGCAAA
AGTTCCGTTTTGAACATGCTGTTCCGGCTTGGAAATAATGCGGGAACAGT
CCGTATTGATGGCTATCCGATTGCAGATTTATGTTTGAAGACATTGAGAC
AATCTATTTCTGTTATCCCGCAGTGCCCAGTCCTTTTCAGTGGAACGCTT
CGGAAGAATTTGGATCCATTCAGTGAACACGTTGATGGAGATATCTGGGA
GGCCCTGGATGACGTCCAAATGAAAgacgccattttgaattgtaaacaaa
aacttgatacCATGGTAACAGAGTCAGGAAACAACTGGAGTGTGGGGGAG
CGCCAACTGTTGTGTTTGGCCAGAGCGTTGTTGAGAAGCTGCAAAATCCT
TTTCATCGATGAAGCCACCTCAAACGTCGATAATGAAACGGATGCTTTGG
TGCAAGAGACCATCCGCCGGAAGTTCAAAGAATGCACCGTCATCACGATC
GCTCATCGTTTGAACACGGTTATGGATTCCGATCGAATCATGGTTCTTGA
TAACGGTAAAATGGTTGAACTGGACGAACCAGCCATTCTGTTGGAGAGCT
CAAACGGATACTTCCGTAAATTGGTTGATCAAGCCGGTCGAAATGAAGCT
CATCGATTGGTCAATGTAGCGGAAGATtctaaaagattacgtcatttgtT
ATTGTTACAAAGCAAAACGAAGTATCCGGGCTCACACATTACCGTATCCA
AAACCAAAGCGGAAATCATCAATTATTTCGGGACTCAAGTTGTTTATGAG
ACAACTGTATAAATGTATGGTGATGGTGTTGAACAATTTTAGTGAAATAA
TTTTGACGAAAGCTGTGATCACCaatgattttactttcaatccggtgttt
ttgtaagaaccacgcgcgggcgttctggatgggaaataagtggcttcatt
tcccatccaggagtctcgagtctagcccttcgggcttggaagtcaatgga
gATTCGCATCTAAGCCTTTATCAGTGAAAATCCTGTTTTTTCGGATTTAT
TGAAATTAGTTTTGTATTTGTACCTACATGTAAAGAACTGATGGGGTGGA
CATATTTTATGTAAGGGAAATTTTAACCTCCGTGGCCAACTAAAGGGGGT
GATTTTTTATGCTATAGTATTTCATATATGatatatttttaaacatttta
actTATTTGTGGAGTGCAAAGTACATATAGTTATAGTTTAttaacactta
ttattttttatataaaagggGGACATTTTTCAAACAACATCGATACTATG
GGGGTGAATTTTTCGTTTTGCGTTTTTTATGTAGAATACTCGCAGTAACA
TTTGATTTTGACCGCTATTTTGATGTTCATACGCGCTTATCGAAATTCAT
CGAATCGTTAAGAGTTCATGTCCAAAG
Run BLAST on NCBI

transcript from alignment at sc0000214:400931..409868-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015631 ID=TCONS_00015631|Name=TCONS_00015631|organism=Clytia hemisphaerica|type=transcript|length=8938bp|location=Sequence derived from alignment at sc0000214:400931..409868- (Clytia hemisphaerica)
CTATCGTCCTCGCCAGATATATTGGTAAGTTTTCTTTCTAAATTTGATCT
TATTTCTTCTCTGATATCTTTAACCTCCTTGTATCAGCCATTATTTTTCA
ATCGCGAAAATTAATTCCCAAGAATTGCGTTTAGACTGCGAAAATTAGAT
CCCGCGAAAATTAGTTCCCTTAAGATAGAAAAGTTATGTATTTCAAGCCA
TGGCCAGCTGATAACTTTAGGTAAAATAAAACGAAAGCAGGACCGACAAA
AGATGTTCCGGTTCCTTGATACTGAAAGACAAACAAAATGTTTGGATTTT
CTACTAGACTACGTATAAAGACTAATACTAAATAGATTAAGTATCTGTTT
TTAAGAGTTTTTTGATACTCTCGAAATGCTTTGCAAGGGTATACTTTTGA
TAGAGTGCACTACAAGGGTTTTCTTTTAGCTGGACACGCTGTAAAGGTGT
GTTTTGGAACTGTTAATTGCATGCCATGTACCTTATTACACGAATATTAC
TAGACAAGTATTCAACGGCCTTGAAATTAACACGATCTGAAATTAACACG
AATTTTTCTGCTTTTTCAAGGAAGCAGTCGCTGGTCTTAATTAAGGAGGT
TTTTATTAACACGAAATTTTTCAATTCGTGTTTATAAAATGACTAATAAT
ATTCTTGTAATAAGGTACATCTTTCAGGCATGTAATCCATTGGTTCTTAT
AAAAGACTTTTTATCGTTTTTGGTTGAAACCATTAAAATTGGACGAGGGG
CTGGTTGGCTGAAAATCACGAAAAATAGATTTATTTGATCATATAAAAAA
CGTCATTAGTTTAGTTTATTGTTTTTGCTTCAAATCTTTAGAATTGGACG
AAGGGCTGGTTGGCTGAAAATCACGAAAAATAGATTTATTTGATCATATA
ATATGTAAACGTCATTAGTTTATTTTATTGTTTTTGCTTCAAACGTTTAG
AATTGGACGAGGGGCTGGTTGGCGTCAGTTTGACGTACGTGCTCTTATTA
AGTGGAATGTTCCAATGGTGCGTTCAACAGAGCGCGCAAGTCGATAACCT
GATGACCTCGGTACAACGTGCTTTTCAATACGCTGACCTACATCCAGAAC
GGGATGAGGGTACGGATAAAGATTTACGAGACACGTGGCCGGAATATGGT
TTGTTGACATTCGAAAGCGCTTCCTTTTCATATCACAAATCGCTACCGTA
CGTTTTGAAAAAGATTTTCACGGCTGTGCGTCCATATGAAAAGGTTTGTT
ATATTTTTATTACCCGTATCAGCCCTTTTGCACCGGCCCTTGTGACAACT
TTTTCAATCAGCCCGGCCCTTAAATTAGCCCTGGAATTGCACTATAATGA
TCATTTTCACAGTACATATAATATATAAAATAATATATAAAATTCAAAAC
ATAAAAAAAAACTTTCTTTTTGTTGTTTTTTGATGATATTTAAAATCAAT
CAGTGAAAAACTTGACTATGGGTTATAAATGAATTTGCAATAAATATTTT
TGATTTTTTTTCACAGTGATGATTTTATATGATCAAGGCAATGATTTACT
CTTCAGAAAATGGCTATTCTTGCAACATTTTTCATCAATTCGATTTCCAA
TTTTCTGTTAATATTTCCATCTGAAAACATTTCTCTCCCGAAGAGTGGTA
GACCCGACATAATTTTGTAAGCGTTTAATTTTTCTTTTCAGCTTGGCATT
GTTGGCAGAACAGGTTCCGGCAAAAGTTCCGTTTTGAACATGCTGTTCCG
GCTTGGAAATAATGCGGGAACAGTCCGTATTGATGGCTATCCGATTGCAG
ATTTATGTTTGAAGACATTGAGACAATCTATTTCTGTTATCCCGCAGGTT
AGAATATATAATTTAATAGAATCCTCATAATTTATGGGAAATGGTATGAT
TTGCATTATACTTAGATATTTCAATCTCAAAACCATCTTGAGAATTGAAT
ATCTATTATAATTAAACAGGGCATTGTAATCTCATTTCAATCATTCTATG
TTCAGTTAAAATAATGAGTTTTGAAGATTTTACTTTATATAAAAATTTGT
CCGCCTTTTTGGGACACACTTTAGTTAATCAATCATGCATAGCAACTCTC
AAAATATTTTTCCCTCGAAAATTCGATCCTTTTTTATCAAGAGAAATAGG
GTATTCCACGTTTTTTATAAGAAACATTTTTATAGGGAACTTGAGGCTGA
AAATGGTCCAAAAAATAATGAATTGTTAAGGAACTGCATACTTACATAGA
TTTACAAAAACCTAAACAAAAAGTCGATCAAATATTGATGAAACAACGTT
CTTTTATTGTACTGGTAGTCAATTGTTTAACAAAACATCAAATCAGTCCA
AAGTTTGCATCTAATTAATAAGGAACTCTGAGGCTGAAATTCTCTGAAAA
AAATAAGGAACTCCAGGCTATCCGAGCCAAGTTGAGGTTTCTTATAAAAA
AACGTGTAGAAAGGTTAAACATGGTGCTATTTGCGACGTGAGGTATGATT
AACACCCTAACCGATTCACCCCGCATCCCTGTACAAAGTTTCTTATAGTT
TATGTAGGAATCTATTGAGAGCTATTTTCATTATTTTTTTTGGGGGGATT
AGGGCTAATAACGGCTAATAACATTTCTTTAAAGTAAGTTTGTGTGAATT
ATTCAAAGCTTATGTATACGTATATGAAGCTTTGTGGCCGGGTAGCTCAG
TCGGTAGAGCATTCGCCTTACAATCTAAGGGTTGTGGGTTCGATCCCCGG
TCACCGCCAACTCAGCAGATGAGTAGCTTAGATTGGATAATCTGATCTAG
GCGGTAGGTTACTGGGAGCTGAGAGTAGGTGTGACGCTCCACCTCAGCAT
TCGATCTCCCAGGTCTAGCGCAAATAGAAAAGGGATAGACTCCCTCACTC
CCGCCACCAGATGAATATACTTACTTACTTATGAAGCTGTTTGCCGATCT
TTGAAAAGCAAGACCTTTCAAGACCCTTATCGTCCGCACGTATCCTGCAG
CACCCATTTTGTCTAAATACACCCCCCCCCCAGATTTAAAAAGATTCCAT
TTTTTCTTGTTTCTAGTGCCCAGTCCTTTTCAGTGGAACGCTTCGGAAGA
ATTTGGATCCATTCAGTGAACACGTTGATGGAGATATCTGGGAGGCCCTG
GATGACGTGAGTTAAACACGCTCTTTTGTGACCCCTTACGTTATACTACA
GCTTTGGTCGAGGGTGAGACCGAAGTCTGCGTTTTATAAGAATATACCCT
TTTTTCATCAGAATTGACCTTTTCATTTCATGATGGATAGTCTTAACTAA
ATAGTCATTCTAATATATTCTTATACTGTATTCTTGGTTAGGAGCCAAAA
CTCAGCCTAAAATTAACATGCATAAAATGGCATTTTTTTGAAAGTATCAG
TCGAGCCTTACTGGGGGTAATTTTGCAATTTAGAGTTGAAAATACTCTAG
AAATTGCATTTTTAAGTTCAGACGCCGAAATTATGGATGAAAGGACCTCT
TGCCTTTCAGCACCCCCAAAGCAATTGACTACTGGAAGGGGGATGTAGGG
AATCTCTTTAACTTAACCCTTTGCATGCCATTCTCTAATATTTCAAGGGC
AATTAATTAATGATTAATCTCTTAATTTAAGGTCCAAATGAAAGACGCCA
TTTTGAATTGTAAACAAAAACTTGATACCATGGTAACAGAGTCAGGAAAC
AACTGGAGTGTGGGGGAGCGCCAACTGTTGTGTTTGGCCAGAGCGTTGTT
GAGAAGCTGCAAAATCCTTTTCATCGATGAAGCCACCTCAAACGTCGATA
ATGAGTATGATTCTTCGAAATCTATCTATTCTTCGCACTAACTTTTATAC
ACCCTGGACCAAGTTTCTAAACCCCGGCCAAGCAAAATCTTTGATTGGAG
TTTTTTTTGAAAAGTGGTACCCTTATTGTAGTACTAATCAACAGCGGTGT
AAATGCATTGAGAGCGTTAGAGTAGAACTACTTTTCCTCAAATCCTTTTG
ACGAAGTAGCGCCGCTAGATGTTATTTTTTATCATTGCAAGGGCTTCTTT
GCGGGTACCACTTTCAAAAAAGGTCCGATCAAAGATGACTGATATAGATT
TGTCCAGGGTTTATAAAAGTCAGTGATTCTACGTTACGCGAGATATATTT
TAAGAAAGCCTGCACCAAACTCTCTAACGGTATCCTTACTTTATCCACAC
CAATGCAATGGTATCTATCGTTATCTATCGTTTTTTTCAAGCCCCCTTCT
ATGCACTTTATTTTTCGAAGATTTAGTACCAGAAGTTGGTAGCAGGGAGA
AACAGGATTCATCTAACTGAAACCGACCGACAGAAAGTAAAAGTCACCAC
CGGGTACTGACTGGTTTTGATCTTATCTGGCACCCACATGGTGAAATTTT
CATCCGACACGCTAAAGCTCTGAAGGTCGGGAAAATTTTCAACGTCTGGA
AGGTTTACATTACGGAATTTTACAAGACTGCGTCAGAGATTTTGCAGCCG
GAGGTCTGGTAACCCAGCCCTTGTTTTCGGGGATTGGCAGGTCCAACCGA
AATATTTTTAGCTTTACGCGCAAATATAGTTGACACCGACTGGGGAAGCG
GCACTTCAAAGGCCGACTATCATTCCTCTCCGATGTGAAATTGGTCCGCT
CCTTTAGAGCTTTAGCGTGGGCGGCCGTCAATCGGCCATCGGAATATCAG
ATAAGCTTTGATTCTGCATTAAACACTCGCTTTTTCCTTCCTTTTTTGCA
CAGTGATGTTGCAAAGAATAATCACCTGTCTTATTCATATTGTAACCCAA
TGTTTTAACCCATAGGGTACTAACTTGGATCTTTTTCCATAAAATTTTAC
CATCACCCTTTTCGGTACACTGTACCAACTTTTTTCCATAGTATGCTGTA
CTCAGCCTGCAGAATTTTTAAACAACCTTTTTAGTACACAGTTAGTACAC
TGTACTAACTCTTTTTTGACCACACTACTCTAAGGTTTTCTTTAGTTAGT
CACAAGGCGTTCCATTTTCTTGGCCCATCAATATAGTCCGGTATAATTAG
GTTTTTACTATTAAAGTGGTTGAATTTTAGCACAGAGTTTCCTGAAATCC
AGGTTTCCCCTGACACCAAAGTTTATCGGCTTAATTCAAAGCAAACGTTT
TCCTTTAATGAAGATCAATGTATAATGATAATTTTGCGTAGTCAAGAAAA
AAACAACACATGAATGAATATTTTTCGGCCAAATTGGTCTTTCTCAACTT
AAAAATGGATTTATTCTATCCTATTTTTGAAAGTTTTGGATATATTTAAC
GCTTTTCAGAATTTAAAGTTCGGGCGAGACTTACGACTTGAGTACTTCGA
CTTGTATTACTGAGAATATAGCCTGGATGCAACTGAATCCCTGATATTTC
GATTTTGGAGGGGTTCAGTGGCATCTAGGCATCAGCCTTTTTGGAACAAT
TTTGAGCATTTGGAAGCTGAGATCGTAAGTGTTAAAGCTCACGAGTAAAA
GCTTAATGTTAAAGCTTAGAGTTATAGCTCAGAGTTGAGACTCAATAGTT
AAAGCTCAAGAGTTAAAGCTCAAGAGTTAAAGCGCAAGAGTTAAAGCGCA
AGAGTTAAAGCGCAAGAGTTAAAGCTTAATGTTAAAGCTTAGAGTTATAG
CTCAGAGTTGAAACTCAATAGTTAAAGCTCAAGAGTTAAAGCGCAAGAGT
TAAAGCGCAAGAGTTAAACTCTTGCTTTCCAGAAGTAAATTGCAACACTT
ACAAATCATTTGTAGTGTTTACAGAGAATTCCCCTTTTCATCAAACACGA
TTTTTTTATAACAATAGTTTACTTTGAAAGAGGATCAAGTATTCTTAAGA
AATTGCCAAAATTGAGAGAGAAATATTCTTAACGTATTCTTACTTTTTTA
GACTTGACTTTTTTACAAACATGAAAATGATCAATTTGAGATTTTTGGAC
TTTTGAGTGAACGTTTGGGTTAAAATTATATTTCTGCCTCAAAGTTTAAA
TTCAAGTCTAACTTAAAAAGCAGTTTTTTCTGTTAACCAAATACAAAATG
ACTGTATTCGTATCAAATTCTGTGAAATTCACCCTAGAGGGTGAGGGTAT
TCTTACGATTTGGCTAACTTTTACCCTGAAATTCTTATAGAAGATATTCT
TATTAAAAAAAGCGTGTATTACGACTTTCTTTGTCGATTTTACTGATCAC
TCTCTATCTCTATCTCTTAGAACGGATGCTTTGGTGCAAGAGACCATCCG
CCGGAAGTTCAAAGAATGCACCGTCATCACGATCGCTCATCGTTTGAACA
CGGTTATGGATTCCGATCGAATCATGGTAAGTGTGACCATCATATCTTTG
TTTAGTTACACTTACAGGTCAACTTTCACTAATCTGAATTTTTATTATTC
GAACTAAAATACTAGTCTCCTCAGCATGTCAATGACATTGAAAAGATAAC
TGCTACTATACATGCGTGATTTATGTGTAATATATAATACAAGTATTACA
GGTCCGTGTTATACACGGCGCAAAATGCAAAAGCACGTGGCAAGCATGTG
GATAGATTTTGACCTTTAAAAAGGTTCTAGACCAATAAAATACCTTCAGA
ATGATATTTCTAACAATTACAAGTGTTTTTCAACTAAAATACCCTCAGCT
GGGAAGTCGTATAAAATAGTCTCTGTAATTTGAATCTTTCTATAATTCGA
GGAAAATTCTAGAATTCATTAAACATCGAGTCAACTGTATTTTGGCTGGC
GTGGTGCTCGTGTCTATAGCTCATTTCACGGTTAAAATGTATCTTCGGTT
ATTAGGGTTGATTTTAGCCTCTTCTTCTCATAACGGCTTTCCGTTGGATG
GACGAAAAAGCATACAAAATTTCCCACAATCCCTTTCGGCCTTGAGATTG
AAACTCTAGTAGAATAAGCAAGTCTGTATAAAAAAGGAAATGCTCGTTTA
GAGCAATGCTATTAAAGTCTGTCTCGAAATAATTGCTTTTTTTTCTCAAT
TTTTTTAATTGATAATATTCCACTCTCGAATATCTTTTTAACGAGCACAA
AACCGCAACTTGATTCGAATTCTATCAAAAGTTACAGCCATTTTTTTCTC
CAGCTGCAAATTATTTCGAGACAGACTTTAGTNGACCCTCAAGGGAATTA
TAATCTATTCCAGATCATTATATAATCGACATTATAATTCCTTTGAGAGT
CCCCGAGGAACCAGAATGCATTGCATTTATCTAAACGCGATATCGTCTAT
TCTTTTAACTTTGATAGAAAATCGTCCGGTAGTTGAGTTCGTCCGGTAGT
AGAAAATTGTCCGGTATTTGAAAATTTTCCCATTTGCGAAAGTTTCGTCC
CTTAAAGTATTATTTTTTGAGATTGTATTTTATAATTTTTAGGTGCTTAG
CATGGTAACGAGGTGGTATTGTTGTCACAATAGTTAATTCTTTATGAGTT
TTAGTGGTTAGACATTGTGATTTATATGTGGGGACAAGCTGGAGTTTCTT
CAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATATT
ATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATT
AGTGAAGTATCTTGTAAAAACTCCAGCTCATCCCTATATGTGAAGTTCAC
TAGTCAATGATTTGGTCTGATTTTGACTGCGTGTAGGGTAGAGTCGAGGC
TTCTAACCTTCCCAAGGTTCCTTATCTTCTTTCTTTCGAATGTTGGCTTT
TCATCTGAAGTTTTGGAGAGTGTCATAAAGGGTTATACCAGTAGCTGCTA
AACTTGCTAAATGGTAATGTTAAAAGTTCTTTCGTCTCGAAAGGGTTTCA
GTCTCGCAAAGTATATAAAGAGGCAAAAGCCGTCTCATAGCTCTGCTTAA
TTCACCAAAATTTCAAGAATATTTGTTAATTTACTGTGTATAATTCATTT
CCCGTCTTAGACGATAACCCTTTCCTTTGACCACTGAAATAGATTTTTAG
GCCCCAGATATTTAGGGTCTGGCACATCAATGACTGAGGATTTTTCATTA
AAGGTTCTTGATAACGGTAAAATGGTTGAACTGGACGAACCAGCCATTCT
GTTGGAGAGCTCAAACGGATACTTCCGTAAATTGGTTGATCAAGCCGGTC
GAAATGAAGCTCATCGATTGGTCAATGTAGCGGAAGATTCTAAAAGATTA
CGTCATTTGTTATTGTTACAAAGCAAAACGAAGTATCCGGGCTCACACAT
TACCGTATCCAAAACCAAAGCGGAAATCATCAATTATTTCGGGACTCAAG
TTGTTTATGAGACAACTGTATAAATGTATGGTGATGGTGTTGAACAATTT
TAGTGAAATAATTTTGACGAAAGCTGTGATCACCAATGATTTTACTTTCA
ATCCGGTGTTTTTGTAAGAACCACGCGCGGGCGTTCTGGATGGGAAATAA
GTGGCTTCATTTCCCATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGG
AAGTCAATGGAGATTCGCATCTAAGCCTTTATCAGTGAAAATCCTGTTTT
TTCGGATTTATTGAAATTAGTTTTGTATTTGTACCTACATGTAAAGAACT
GATGGGGTGGACATATTTTATGTAAGGGAAATTTTAACCTCCGTGGCCAA
CTAAAGGGGGTGATTTTTTATGCTATAGTATTTCATATATGATATATTTT
TAAACATTTTAACTTATTTGTGGAGTGCAAAGTACATATAGTTATAGTTT
ATTAACACTTATTATTTTTTATATAAAAGGGGGACATTTTTCAAACAACA
TCGATACTATGGGGGTGAATTTTTCGTTTTGCGTTTTTTATGTAGAATAC
TCGCAGTAACATTTGATTTTGACCGCTATTTTGATGTTCATACGCGCTTA
TCGAAATTCATCGAATCGTTAAGAGTTCATGTCCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008723XLOC_008723Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015631-exon-sc0000214-1575043694:409845..409868TCONS_00015631-exon-sc0000214-1575043694:409845..409868Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1575043694:408626..408918TCONS_00015631-exon-sc0000214-1575043694:408626..408918Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1575043694:408022..408177TCONS_00015631-exon-sc0000214-1575043694:408022..408177Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1575043694:406713..406802TCONS_00015631-exon-sc0000214-1575043694:406713..406802Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1575043694:406065..406237TCONS_00015631-exon-sc0000214-1575043694:406065..406237Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1575043694:403543..403648TCONS_00015631-exon-sc0000214-1575043694:403543..403648Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1575043694:400931..401815TCONS_00015631-exon-sc0000214-1575043694:400931..401815Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:409845..409868TCONS_00015631-exon-sc0000214-1510915933:409845..409868Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:408626..408918TCONS_00015631-exon-sc0000214-1510915933:408626..408918Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:408022..408177TCONS_00015631-exon-sc0000214-1510915933:408022..408177Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:406713..406802TCONS_00015631-exon-sc0000214-1510915933:406713..406802Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:406065..406237TCONS_00015631-exon-sc0000214-1510915933:406065..406237Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:403543..403648TCONS_00015631-exon-sc0000214-1510915933:403543..403648Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1510915933:400931..401815TCONS_00015631-exon-sc0000214-1510915933:400931..401815Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:409845..409868TCONS_00015631-exon-sc0000214-1491911889:409845..409868Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:408626..408918TCONS_00015631-exon-sc0000214-1491911889:408626..408918Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:408022..408177TCONS_00015631-exon-sc0000214-1491911889:408022..408177Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:406713..406802TCONS_00015631-exon-sc0000214-1491911889:406713..406802Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:406065..406237TCONS_00015631-exon-sc0000214-1491911889:406065..406237Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:403543..403648TCONS_00015631-exon-sc0000214-1491911889:403543..403648Clytia hemisphaericaexon
TCONS_00015631-exon-sc0000214-1491911889:400931..401815TCONS_00015631-exon-sc0000214-1491911889:400931..401815Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:400931..409868 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.137019	0.152519	0.248151	0.224062	0.99996	0.030016	0.52111	0.310808	0.63847	0.413855	0.0282324	0.322573	0.107149	0.141916	0.28484	0.274235	0.296171	0.140282	0.458845	0.184932	0.17513	0.423787	0.355166	0.501499	0.399908	0.202947	0.391813	0.182208	0.352139	0.354151
Blast
[Close]
BLAST of TCONS_00015631 vs. Swiss-Prot (Human)
Match: MRP4 (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 316.62 bits (810), Expect = 1.885e-94
Identity = 161/313 (51.44%), Postives = 224/313 (71.57%), Query Frame = 3 
Query:    3 IVLARYIELDEGLVGVSLTYVLLLSGMFQWCVQQSAQVDNLMTSVQRAFQYADLHPERDEGTDKDLRDTWPEYGLLTFESASFSYHKSLPYVLKKIFTAVRPYEKLGIVGRTGSGKSSVLNMLFRLGNNAGTVRIDGYPIADLCLKTLRQSISVIPQCPVLFSGTLRKNLDPFSEHVDGDIWEALDDVQMKDAILNCKQKLDTMVTESGNNWSVGERQXXXXXXXXXXXXKILFIDEATSNVDNETDALVQETIRRKFKECTVITIAHRLNTVMDSDRIMVLDNGKMVELDEPAILLESSNGYFRKLVDQAGR 941
            ++LA+   LD G VG++L+Y L L GMFQWCV+QSA+V+N+M SV+R  +Y DL  E      K     WP  G++ F++ +F Y    P VLK +   ++  EK+GIVGRTG+GKSS+++ LFRL    G + ID     ++ L  LR+ +S+IPQ PVLF+GT+RKNLDPF+EH D ++W AL +VQ+K+ I +   K+DT + ESG+N+SVG+RQL+CLARA+LR  +IL IDEAT+NVD  TD L+Q+ IR KF  CTV+TIAHRLNT++DSD+IMVLD+G++ E DEP +LL++    F K+V Q G+
Sbjct:  968 LILAK--TLDAGQVGLALSYALTLMGMFQWCVRQSAEVENMMISVERVIEYTDLEKEAPWEYQKRPPPAWPHEGVIIFDNVNFMYSPGGPLVLKHLTALIKSQEKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWNALQEVQLKETIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQQLGK 1278
The following BLAST results are available for this feature:
BLAST of TCONS_00015631 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRP41.885e-9451.44Multidrug resistance-associated protein 4 OS=Homo ... [more]
back to top