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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015555 ID=TCONS_00015555|Name=TCONS_00015555|organism=Clytia hemisphaerica|type=transcript|length=1209bp
taaatgtgTACgtaataaaaatctttaaaaaaacttttaaaaaatcttta
caaaattaGATACATTTCCTGGCGTTTCCATCTTTTTTCTTACAATCTAC
TTCACTTTTCCACTCTTTATAAGTTTTCTTCAAATAAGCCACAGAATCGT
GTGgcatttttgttttgacgttATTAAGCATAACCATTTTCGGCGGTACC
ATTATGCTTCCATCATATTTTGGAAGGTGTACATCATCAAACTTGAATAT
GTTTTTGGAATCAATCTCATAGGCCCACATTCCTAGGCCATTACCATTCG
TTTTACTAAATTCCAAACTCATTCTTTTAGCACCTCTCCAAGTCTGATGA
AAACCGAATTTTTTGGTCAAAACATTCATTGCATCTTTGAAAATTCCTGt
tttccaatgtttccaatCAACTACTAAATCAATGTCCTCATCATAATGCA
AAATACCTTTTGATCGAACATAACTGATAACATAACCTCCAACGATCATA
TACGAAGCATTGTTCGCATTTAAATGGTTACTAACTTGCTCTAAAGTTTG
CATGAACTTCTTACGACAACAAGGTGGCGTATCGATTCTCATCTGGCGTT
TATAATCATAAAATGGTCCTGGTTCACATTCTCGAGTGTGTTTTGTACAT
CCCAAAGAAGTGATTGTTCCGTCTGTGTGGACGATCCATTTGACTCGTTT
GTGAGATCGCTTTAGCTCCTTCCCATACTTTTTGTATACCATTACTTCGT
CCTTAAAAAGACTTTTGTATAGGTTATTACAAGTTAGGTTTTCAATTGTA
TTGTCATAGCTTGCTAGCTCATAGAGTGTCCAATCTGCAGGCGAGTATTT
GAAGGTCTTGCAAACTTCAAACAGCACTTGAGACTCGTTTCGCAAAAGAT
TGTATTTGTCGGGGAAAGTTTCCTTGGATCGGTTGAAAAAAGGGTTGAAG
CTTTGTCCAATCAGAATTGATTTGTTTCGAAAAAGATTATGCTTGGAGCT
GGATGTGCTGAATGTGAATGTGGATTGGTTGACAAAAGATATACTTGGTT
TATAGTTAGGTCCTTTTAAAACAGTAGTATTCCACCTCGTTGAATATGTA
TTCCAGAGTAGTTTACAAATCATAGCAAGTAGTATGAACAACATACAATT
CCAAACAGTTGTTTTCTTTCCAATCATATTTTTCTTTACTAATATAATCT
GAAAGGTTT Run BLAST on NCBI protein sequence of TCONS_00015555-protein >TCONS_00015555-protein ID=TCONS_00015555-protein|Name=TCONS_00015555-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
TFQIILVKKNMIGKKTTVWNCMLFILLAMICKLLWNTYSTRWNTTVLKGP
NYKPSISFVNQSTFTFSTSSSKHNLFRNKSILIGQSFNPFFNRSKETFPD
KYNLLRNESQVLFEVCKTFKYSPADWTLYELASYDNTIENLTCNNLYKSL
FKDEVMVYKKYGKELKRSHKRVKWIVHTDGTITSLGCTKHTRECEPGPFY
DYKRQMRIDTPPCCRKKFMQTLEQVSNHLNANNASYMIVGGYVISYVRSK
GILHYDEDIDLVVDWKHWKTGIFKDAMNVLTKKFGFHQTWRGAKRMSLEF
SKTNGNGLGMWAYEIDSKNIFKFDDVHLPKYDGSIMVPPKMVMLNNVKTK
MPHDSVAYLKKTYKEWKSEVDCKKKDGNARKCI Run BLAST on NCBI transcript from alignment at sc0000212:9306..10514 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015555 ID=TCONS_00015555|Name=TCONS_00015555|organism=Clytia hemisphaerica|type=transcript|length=1209bp|location=Sequence derived from alignment at sc0000212:9306..10514 (Clytia hemisphaerica)
AAACCTTTCAGATTATATTAGTAAAGAAAAATATGATTGGAAAGAAAACA
ACTGTTTGGAATTGTATGTTGTTCATACTACTTGCTATGATTTGTAAACT
ACTCTGGAATACATATTCAACGAGGTGGAATACTACTGTTTTAAAAGGAC
CTAACTATAAACCAAGTATATCTTTTGTCAACCAATCCACATTCACATTC
AGCACATCCAGCTCCAAGCATAATCTTTTTCGAAACAAATCAATTCTGAT
TGGACAAAGCTTCAACCCTTTTTTCAACCGATCCAAGGAAACTTTCCCCG
ACAAATACAATCTTTTGCGAAACGAGTCTCAAGTGCTGTTTGAAGTTTGC
AAGACCTTCAAATACTCGCCTGCAGATTGGACACTCTATGAGCTAGCAAG
CTATGACAATACAATTGAAAACCTAACTTGTAATAACCTATACAAAAGTC
TTTTTAAGGACGAAGTAATGGTATACAAAAAGTATGGGAAGGAGCTAAAG
CGATCTCACAAACGAGTCAAATGGATCGTCCACACAGACGGAACAATCAC
TTCTTTGGGATGTACAAAACACACTCGAGAATGTGAACCAGGACCATTTT
ATGATTATAAACGCCAGATGAGAATCGATACGCCACCTTGTTGTCGTAAG
AAGTTCATGCAAACTTTAGAGCAAGTTAGTAACCATTTAAATGCGAACAA
TGCTTCGTATATGATCGTTGGAGGTTATGTTATCAGTTATGTTCGATCAA
AAGGTATTTTGCATTATGATGAGGACATTGATTTAGTAGTTGattggaaa
cattggaaaaCAGGAATTTTCAAAGATGCAATGAATGTTTTGACCAAAAA
ATTCGGTTTTCATCAGACTTGGAGAGGTGCTAAAAGAATGAGTTTGGAAT
TTAGTAAAACGAATGGTAATGGCCTAGGAATGTGGGCCTATGAGATTGAT
TCCAAAAACATATTCAAGTTTGATGATGTACACCTTCCAAAATATGATGG
AAGCATAATGGTACCGCCGAAAATGGTTATGCTTAATaacgtcaaaacaa
aaatgcCACACGATTCTGTGGCTTATTTGAAGAAAACTTATAAAGAGTGG
AAAAGTGAAGTAGATTGTAAGAAAAAAGATGGAAACGCCAGGAAATGTAT
CtaattttgtaaagattttttaaaagtttttttaaagatttttattacGT
Acacattta Coding sequence (CDS) from alignment at sc0000212:9306..10514 >TCONS_00015555 ID=TCONS_00015555|Name=TCONS_00015555|organism=Clytia hemisphaerica|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000212:9306..10514 (Clytia hemisphaerica)
ACCTTTCAGATTATATTAGTAAAGAAAAATATGATTGGAAAGAAAACAAC
TGTTTGGAATTGTATGTTGTTCATACTACTTGCTATGATTTGTAAACTAC
TCTGGAATACATATTCAACGAGGTGGAATACTACTGTTTTAAAAGGACCT
AACTATAAACCAAGTATATCTTTTGTCAACCAATCCACATTCACATTCAG
CACATCCAGCTCCAAGCATAATCTTTTTCGAAACAAATCAATTCTGATTG
GACAAAGCTTCAACCCTTTTTTCAACCGATCCAAGGAAACTTTCCCCGAC
AAATACAATCTTTTGCGAAACGAGTCTCAAGTGCTGTTTGAAGTTTGCAA
GACCTTCAAATACTCGCCTGCAGATTGGACACTCTATGAGCTAGCAAGCT
ATGACAATACAATTGAAAACCTAACTTGTAATAACCTATACAAAAGTCTT
TTTAAGGACGAAGTAATGGTATACAAAAAGTATGGGAAGGAGCTAAAGCG
ATCTCACAAACGAGTCAAATGGATCGTCCACACAGACGGAACAATCACTT
CTTTGGGATGTACAAAACACACTCGAGAATGTGAACCAGGACCATTTTAT
GATTATAAACGCCAGATGAGAATCGATACGCCACCTTGTTGTCGTAAGAA
GTTCATGCAAACTTTAGAGCAAGTTAGTAACCATTTAAATGCGAACAATG
CTTCGTATATGATCGTTGGAGGTTATGTTATCAGTTATGTTCGATCAAAA
GGTATTTTGCATTATGATGAGGACATTGATTTAGTAGTTGattggaaaca
ttggaaaaCAGGAATTTTCAAAGATGCAATGAATGTTTTGACCAAAAAAT
TCGGTTTTCATCAGACTTGGAGAGGTGCTAAAAGAATGAGTTTGGAATTT
AGTAAAACGAATGGTAATGGCCTAGGAATGTGGGCCTATGAGATTGATTC
CAAAAACATATTCAAGTTTGATGATGTACACCTTCCAAAATATGATGGAA
GCATAATGGTACCGCCGAAAATGGTTATGCTTAATaacgtcaaaacaaaa
atgcCACACGATTCTGTGGCTTATTTGAAGAAAACTTATAAAGAGTGGAA
AAGTGAAGTAGATTGTAAGAAAAAAGATGGAAACGCCAGGAAATGTATCt
aa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015555-exon-sc0000212-1491911889:9306..10514 | TCONS_00015555-exon-sc0000212-1491911889:9306..10514 | Clytia hemisphaerica | exon |
| TCONS_00015555-exon-sc0000212-1510915933:9306..10514 | TCONS_00015555-exon-sc0000212-1510915933:9306..10514 | Clytia hemisphaerica | exon |
| TCONS_00015555-exon-sc0000212-1575043694:9306..10514 | TCONS_00015555-exon-sc0000212-1575043694:9306..10514 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212 | supercontig | sc0000212:9306..10514 . |
Blast
The following BLAST results are available for this feature:
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